RNA–Protein interactions for RNA: ENST00000481673.5

CHKB-209, Transcript of choline kinase beta, humanhuman

TSL 1 (best)

Gene CHKB, Length 1,856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-209ENST00000481673 ZNF556Q9HAH1 456 aa18.71■□□□□ 0.59
CHKB-209ENST00000481673 KCND3Q9UK17 655 aa18.71■□□□□ 0.59
CHKB-209ENST00000481673 POFUT2Q9Y2G5 429 aa18.71■□□□□ 0.59
CHKB-209ENST00000481673 GMPPBQ9Y5P6 360 aa18.71■□□□□ 0.59
CHKB-209ENST00000481673 WASHC1A8K0Z3 465 aa18.71■□□□□ 0.59
CHKB-209ENST00000481673 ZNF701M0R085 212 aaPredicted RBP18.71■□□□□ 0.59
CHKB-209ENST00000481673 EEF1B2P24534 225 aaKnown RBP18.71■□□□□ 0.59
CHKB-209ENST00000481673 PXNP49023 591 aaPredicted RBP18.71■□□□□ 0.59
CHKB-209ENST00000481673 CSNK2BP67870 215 aa18.71■□□□□ 0.59
CHKB-209ENST00000481673 CD47Q08722 323 aa18.71■□□□□ 0.59
CHKB-209ENST00000481673 FAM92BQ6ZTR7 304 aa18.71■□□□□ 0.59
CHKB-209ENST00000481673 GPR141Q7Z602 305 aa18.71■□□□□ 0.59
CHKB-209ENST00000481673 GALNT5Q7Z7M9 940 aa18.71■□□□□ 0.59
CHKB-209ENST00000481673 ZNF605Q86T29 641 aa18.71■□□□□ 0.59
CHKB-209ENST00000481673 SLC44A2Q8IWA5 706 aaPredicted RBP18.71■□□□□ 0.59
CHKB-209ENST00000481673 OR10G2Q8NGC3 310 aa18.71■□□□□ 0.59
CHKB-209ENST00000481673 PHF10Q8WUB8 498 aaKnown RBP18.71■□□□□ 0.59
CHKB-209ENST00000481673 APOBEC4Q8WW27 367 aaKnown RBP18.71■□□□□ 0.59
CHKB-209ENST00000481673 CNDP2Q96KP4 475 aaKnown RBP18.71■□□□□ 0.59
CHKB-209ENST00000481673 SPACA7Q96KW9 195 aa18.71■□□□□ 0.59
CHKB-209ENST00000481673 SERHL2Q9H4I8 314 aa18.71■□□□□ 0.59
CHKB-209ENST00000481673 DOLKQ9UPQ8 538 aa18.71■□□□□ 0.59
CHKB-209ENST00000481673 HCN4Q9Y3Q4 1203 aa18.71■□□□□ 0.59
CHKB-209ENST00000481673 P2RX6O15547 441 aa18.7■□□□□ 0.58
CHKB-209ENST00000481673 GADD45GO95257 159 aa18.7■□□□□ 0.58
CHKB-209ENST00000481673 PAX7P23759 505 aa18.7■□□□□ 0.58
CHKB-209ENST00000481673 ELK4P28324 431 aa18.7■□□□□ 0.58
CHKB-209ENST00000481673 LIMS1P48059 325 aa18.7■□□□□ 0.58
CHKB-209ENST00000481673 XKP51811 444 aa18.7■□□□□ 0.58
CHKB-209ENST00000481673 PRKAG1P54619 331 aa18.7■□□□□ 0.58
CHKB-209ENST00000481673 CDH12P55289 794 aa18.7■□□□□ 0.58
CHKB-209ENST00000481673 SKP1P63208 163 aa18.7■□□□□ 0.58
CHKB-209ENST00000481673 MAPK11Q15759 364 aa18.7■□□□□ 0.58
CHKB-209ENST00000481673 GPR19Q15760 415 aa18.7■□□□□ 0.58
CHKB-209ENST00000481673 COLEC12Q5KU26 742 aa18.7■□□□□ 0.58
CHKB-209ENST00000481673 ATAD3BQ5T9A4 648 aa18.7■□□□□ 0.58
CHKB-209ENST00000481673 ANKRD34AQ69YU3 496 aa18.7■□□□□ 0.58
CHKB-209ENST00000481673 FRMPD2BQ6IN97 320 aa18.7■□□□□ 0.58
CHKB-209ENST00000481673 CSNK1A1LQ8N752 337 aa18.7■□□□□ 0.58
CHKB-209ENST00000481673 NUP43Q8NFH3 380 aa18.7■□□□□ 0.58
CHKB-209ENST00000481673 PITX2Q99697 317 aa18.7■□□□□ 0.58
CHKB-209ENST00000481673 CCDC3Q9BQI4 270 aa18.7■□□□□ 0.58
CHKB-209ENST00000481673 ACER3Q9NUN7 267 aa18.7■□□□□ 0.58
CHKB-209ENST00000481673 PTGFRNQ9P2B2 879 aa18.7■□□□□ 0.58
CHKB-209ENST00000481673 LOC105369274A0A096LPK9 316 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 LOC102723532A0A0G2JNH3 316 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 CCDC160A6NGH7 325 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 PRAMEF25A6NGN4 478 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 LILRA5A6NI73 299 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 B4DGG1 531 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 CASC3O15234 703 aaKnown RBP18.69■□□□□ 0.58
CHKB-209ENST00000481673 KIF1CO43896 1103 aaKnown RBP18.69■□□□□ 0.58
CHKB-209ENST00000481673 SRPX2O60687 465 aaPredicted RBP18.69■□□□□ 0.58
CHKB-209ENST00000481673 MITFO75030 526 aaPredicted RBP18.69■□□□□ 0.58
CHKB-209ENST00000481673 UBXN7O94888 489 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 OR6B1O95007 311 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 LSSP48449 732 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 MAPK10P53779 464 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 NUP107P57740 925 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 HNRNPKP61978 463 aaKnown RBP eCLIP18.69■□□□□ 0.582e-21■■■■■ 55.9
CHKB-209ENST00000481673 IL1RL1Q01638 556 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 RUNX2Q13950 521 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 LASP1Q14847 261 aaKnown RBP18.69■□□□□ 0.58
CHKB-209ENST00000481673 LAPTM4AQ15012 233 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 TMEM107Q6UX40 140 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 OR4N4Q8N0Y3 316 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 KLHL6Q8WZ60 621 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 TANKQ92844 425 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 CLDN23Q96B33 292 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 COL21A1Q96P44 957 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 FEVQ99581 238 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 ACTRT3Q9BYD9 372 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 PAPOLBQ9NRJ5 636 aaKnown RBP18.69■□□□□ 0.58
CHKB-209ENST00000481673 CEPT1Q9Y6K0 416 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 PLXND1Q9Y4D7 1925 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 E9PQ18 207 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 MRPS14O60783 128 aaKnown RBP18.69■□□□□ 0.58
CHKB-209ENST00000481673 ABCB7O75027 752 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 C8orf89P0DMQ9 161 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 IL5RAQ01344 420 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 CDK5R2Q13319 367 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 PUM1Q14671 1186 aaKnown RBP eCLIP18.69■□□□□ 0.58
CHKB-209ENST00000481673 SYPL1Q16563 259 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 ZCCHC10Q8TBK6 192 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 HRASLS5Q96KN8 279 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 TRNT1Q96Q11 434 aaKnown RBP18.69■□□□□ 0.58
CHKB-209ENST00000481673 FOXQ1Q9C009 403 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 TRIM45Q9H8W5 580 aaPredicted RBP18.69■□□□□ 0.58
CHKB-209ENST00000481673 EVA1BQ9NVM1 165 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 PTTG2Q9NZH5 202 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 COLQQ9Y215 455 aaPredicted RBP18.69■□□□□ 0.58
CHKB-209ENST00000481673 SLC9A8Q9Y2E8 581 aa18.69■□□□□ 0.58
CHKB-209ENST00000481673 AHCYL1O43865 530 aa18.68■□□□□ 0.58
CHKB-209ENST00000481673 GALR3O60755 368 aaPredicted RBP18.68■□□□□ 0.58
CHKB-209ENST00000481673 CCNB2O95067 398 aa18.68■□□□□ 0.58
CHKB-209ENST00000481673 WNT1P04628 370 aa18.68■□□□□ 0.58
CHKB-209ENST00000481673 EIF2S1P05198 315 aaKnown RBP18.68■□□□□ 0.58
CHKB-209ENST00000481673 IL9P15248 144 aa18.68■□□□□ 0.58
CHKB-209ENST00000481673 PORP16435 677 aaPredicted RBP18.68■□□□□ 0.58
CHKB-209ENST00000481673 JUNBP17275 347 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms