RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 OR8J1Q8NGP2 316 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 C1orf216Q8TAB5 229 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 CEP76Q8TAP6 659 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 GPR34Q9UPC5 381 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 TARM1B6A8C7 271 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 C1orf105O95561 183 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 TFAP2AP05549 437 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 STSP08842 583 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 ZNF26P17031 533 aaPredicted RBP13.65□□□□□ -0.22
COL20A1-206ENST00000479501 STOMP27105 288 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 IL12BP29460 328 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 LHX8Q68G74 356 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 PDZD3Q86UT5 571 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 CHERPQ8IWX8 916 aaKnown RBP13.65□□□□□ -0.22
COL20A1-206ENST00000479501 BCL7CQ8WUZ0 217 aaPredicted RBP13.65□□□□□ -0.22
COL20A1-206ENST00000479501 KLHDC7BQ96G42 594 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 P2RY12Q9H244 342 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 PELI2Q9HAT8 420 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 NLGN3Q9NZ94 848 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 CD300AQ9UGN4 299 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 HCN2Q9UL51 889 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 CDH7Q9ULB5 785 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 SBF2Q86WG5 1849 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 ELOA3DA6NLF2 546 aaPredicted RBP13.65□□□□□ -0.22
COL20A1-206ENST00000479501 TRIM3O75382 744 aaPredicted RBP13.65□□□□□ -0.22
COL20A1-206ENST00000479501 GSTT2BP0CG30 244 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 HOXD12P35452 270 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 IGFALSP35858 605 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 CLCA4Q14CN2 919 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 ELOA3BQ3SY89 546 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 NDUFAF5Q5TEU4 345 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 MEDAGQ5VYS4 303 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 TRIM46Q7Z4K8 759 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 AVL9Q8NBF6 648 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 LSM14AQ8ND56 463 aaKnown RBP13.65□□□□□ -0.22
COL20A1-206ENST00000479501 ELOA3Q8NG57 546 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 CIDECQ96AQ7 238 aaPredicted RBP13.65□□□□□ -0.22
COL20A1-206ENST00000479501 EVA1BQ9NVM1 165 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 H3BMQ9 156 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 OR2B3O76000 313 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 ACVR2AP27037 513 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 DPP6P42658 865 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 SLC6A11P48066 632 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 ARFIP1P53367 373 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 SLC27A4Q6P1M0 643 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 KLHL24Q6TFL4 600 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 LCTLQ6UWM7 567 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 TMEM107Q6UX40 140 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 SLC9B2Q86UD5 537 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 SUN3Q8TAQ9 357 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.65□□□□□ -0.22
COL20A1-206ENST00000479501 OSTF1Q92882 214 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 TEX37Q96LM6 180 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 COG8Q96MW5 612 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 TMEM184CQ9NVA4 438 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 SEC14L4Q9UDX3 406 aa13.65□□□□□ -0.22
COL20A1-206ENST00000479501 C2orf74A8MZ97 194 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 ZNF432O94892 652 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 ZNF24P17028 368 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 PCGF2P35227 344 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 ZNF81P51508 661 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 CDK5R2Q13319 367 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 ENPP2Q13822 863 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 UGT8Q16880 541 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 GGTA1PQ4G0N0 100 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 DUS1LQ6P1R4 473 aaKnown RBP13.64□□□□□ -0.23
COL20A1-206ENST00000479501 OR2L2Q8NH16 312 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 GAB3Q8WWW8 586 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 ZNF354BQ96LW1 612 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 DPYSL5Q9BPU6 564 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 GTPBP2Q9BX10 602 aaKnown RBP13.64□□□□□ -0.23
COL20A1-206ENST00000479501 MARK1Q9P0L2 795 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 IFT52Q9Y366 437 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 CMAHPQ9Y471 501 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 MAU2Q9Y6X3 613 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 OR6C74A6NCV1 312 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 L7N2F9 121 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 NPC1O15118 1278 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 KCNJ13O60928 360 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 TAS2R38P59533 333 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 ADAM8P78325 824 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 XKRXQ6PP77 449 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 ZNF548Q8NEK5 533 aaPredicted RBP13.64□□□□□ -0.23
COL20A1-206ENST00000479501 OR10H5Q8NGA6 315 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 UBTD2Q8WUN7 234 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 MGLLQ99685 303 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 ABCG4Q9H172 646 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 PCDHGA8Q9Y5G5 932 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 SHROOM3Q8TF72 1996 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 A8MUA0 341 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 B4GAT1O43505 415 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 ZNF3P17036 446 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 NCS1P62166 190 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 CES4AQ5XG92 561 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 FAAH2Q6GMR7 532 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 ARL9Q6T311 187 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 AKAP1Q92667 903 aaKnown RBP eCLIP13.64□□□□□ -0.23
COL20A1-206ENST00000479501 FUZQ9BT04 418 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 LHPPQ9H008 270 aa13.64□□□□□ -0.23
COL20A1-206ENST00000479501 CLEC4EQ9ULY5 219 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms