RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 TMEM245Q9H330 911 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 DPEP2Q9H4A9 486 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 AKAP7Q9P0M2 348 aaPredicted RBP3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 TRIM10Q9UDY6 481 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 TRMT6Q9UJA5 497 aaKnown RBP3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 EXOC6BQ9Y2D4 811 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 WDR37Q9Y2I8 494 aa3.46□□□□□ -1.86
CDC42BPA-212ENST00000478573 CCL15-CCL14A0A0B4J2E2 113 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 TRBV2A0A0J9YWF9 115 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 C15orf61A6NNL5 157 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 ZNF732B4DXR9 585 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 SLC1A7O00341 560 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 CXCL11O14625 94 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 MLNRO43193 412 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 CEACAM4O75871 244 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 BCAS2O75934 225 aaPredicted RBP3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 ABHD2P08910 425 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 CAPN2P17655 700 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 CYP3A5P20815 502 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 HLA-FP30511 346 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 SOX3P41225 446 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 NOVP48745 357 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 IRX1P78414 480 aaPredicted RBP3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 LCP2Q13094 533 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 TSTA3Q13630 321 aaPredicted RBP3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 CDH18Q13634 790 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 CCL15Q16663 113 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 ATP1A1-AS1Q5TC04 95 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 CYP4V2Q6ZWL3 525 aaPredicted RBP3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 LYG1Q8N1E2 194 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 RAB42Q8N4Z0 105 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 TCEANCQ8N8B7 351 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 SMYD1Q8NB12 490 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 OR4D10Q8NGI6 311 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 MAPK15Q8TD08 544 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 SMAP2Q8WU79 429 aaPredicted RBP3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 CHURC1Q8WUH1 139 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 FAM46BQ96A09 425 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 ULK4Q96C45 1275 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 OMA1Q96E52 524 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 GMPPAQ96IJ6 420 aaPredicted RBP3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 ART5Q96L15 291 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 C2orf48Q96LS8 159 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 GUCD1Q96NT3 240 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 NECTIN4Q96NY8 510 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 NEDD4LQ96PU5 975 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 ATOH8Q96SQ7 321 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 NAP1L3Q99457 506 aaPredicted RBP3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 SPXQ9BT56 116 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 UBXN6Q9BZV1 441 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 LRRCC1Q9C099 1032 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 VIPAS39Q9H9C1 493 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 INTS10Q9NVR2 710 aaKnown RBP3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 ANO10Q9NW15 660 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 RAI14Q9P0K7 980 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 KCNK6Q9Y257 313 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 NCKAP1Q9Y2A7 1128 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 TDRKHQ9Y2W6 561 aaKnown RBP3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 PLIN4Q96Q06 1357 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 DOCK5Q9H7D0 1870 aa3.45□□□□□ -1.86
CDC42BPA-212ENST00000478573 UMODL1Q5DID0 1318 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 TTC41PQ6P2S7 1318 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 A0A1W2PR80 420 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 MEIOCA2RUB1 952 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 SLC15A5A6NIM6 579 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 SYT7O43581 403 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 IGLV1-44P01699 117 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 ASNSP08243 561 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 ODC1P11926 461 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 ANPEPP15144 967 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 SLC1A3P43003 542 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 TNFSF10P50591 281 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 SMSP52788 366 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 PAX9P55771 341 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 TCP10Q12799 353 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 CEACAM7Q14002 265 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 FAM106AQ4KMX7 169 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 ADAMTSL4-AS1Q5T5F5 129 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 RAB12Q6IQ22 244 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 ZSCAN25Q6NSZ9 544 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 B3GLCTQ6Y288 498 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 NOTCH2NLQ7Z3S9 236 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 HOGA1Q86XE5 327 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 THEM5Q8N1Q8 247 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 ZNF619Q8N2I2 560 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 DDHD1Q8NEL9 900 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 MRGPRDQ8TDS7 321 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 SLCO4A1Q96BD0 722 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 C12orf42Q96LP6 360 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 FAM218AQ96MZ4 157 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 PCDHB18PQ96TA0 734 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 KRT12Q99456 494 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 RIOK1Q9BRS2 568 aaKnown RBP3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 FAM213AQ9BRX8 229 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 NUSAP1Q9BXS6 441 aaKnown RBP3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 CRNKL1Q9BZJ0 848 aaKnown RBP3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 FNDC4Q9H6D8 234 aaPredicted RBP3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 DCTPP1Q9H773 170 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 ATAD3AQ9NVI7 634 aa3.44□□□□□ -1.86
CDC42BPA-212ENST00000478573 AATFQ9NY61 560 aaKnown RBP eCLIP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms