RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 FAM25EA8MYX2 175 aa13.52□□□□□ -0.24
NPHP4-208ENST00000478423 CLPXO76031 633 aa13.52□□□□□ -0.24
NPHP4-208ENST00000478423 PABPC4LP0CB38 370 aaKnown RBP13.52□□□□□ -0.24
NPHP4-208ENST00000478423 PSMB5P28074 263 aa13.52□□□□□ -0.24
NPHP4-208ENST00000478423 ACSL1P33121 698 aa13.52□□□□□ -0.24
NPHP4-208ENST00000478423 CTBSQ01459 385 aa13.52□□□□□ -0.24
NPHP4-208ENST00000478423 ZFP69Q49AA0 526 aa13.52□□□□□ -0.24
NPHP4-208ENST00000478423 DNM1P34Q6PK57 102 aa13.52□□□□□ -0.24
NPHP4-208ENST00000478423 YIPF7Q8N8F6 280 aa13.52□□□□□ -0.24
NPHP4-208ENST00000478423 ACOT4Q8N9L9 421 aa13.52□□□□□ -0.24
NPHP4-208ENST00000478423 HCAR2Q8TDS4 363 aa13.52□□□□□ -0.24
NPHP4-208ENST00000478423 TAMM41Q96BW9 452 aa13.52□□□□□ -0.24
NPHP4-208ENST00000478423 NARS2Q96I59 477 aaKnown RBP13.52□□□□□ -0.24
NPHP4-208ENST00000478423 BIRC8Q96P09 236 aa13.52□□□□□ -0.24
NPHP4-208ENST00000478423 CLEC4EQ9ULY5 219 aa13.52□□□□□ -0.24
NPHP4-208ENST00000478423 CABIN1Q9Y6J0 2220 aa13.52□□□□□ -0.24
NPHP4-208ENST00000478423 PRAMEF26H0Y7S4 382 aa13.52□□□□□ -0.25
NPHP4-208ENST00000478423 B4GALT3O60512 393 aa13.52□□□□□ -0.25
NPHP4-208ENST00000478423 ITGA10O75578 1167 aa13.52□□□□□ -0.25
NPHP4-208ENST00000478423 RAB36O95755 333 aa13.52□□□□□ -0.25
NPHP4-208ENST00000478423 STSP08842 583 aa13.52□□□□□ -0.25
NPHP4-208ENST00000478423 AP3S2P59780 193 aa13.52□□□□□ -0.25
NPHP4-208ENST00000478423 VEZF1Q14119 521 aa13.52□□□□□ -0.25
NPHP4-208ENST00000478423 PAMR1Q6UXH9 720 aa13.52□□□□□ -0.25
NPHP4-208ENST00000478423 OR56A3Q8NH54 315 aa13.52□□□□□ -0.25
NPHP4-208ENST00000478423 ZNF420Q8TAQ5 688 aaPredicted RBP13.52□□□□□ -0.25
NPHP4-208ENST00000478423 FANK1Q8TC84 345 aa13.52□□□□□ -0.25
NPHP4-208ENST00000478423 BCL7CQ8WUZ0 217 aaPredicted RBP13.52□□□□□ -0.25
NPHP4-208ENST00000478423 ARRDC3Q96B67 414 aa13.52□□□□□ -0.25
NPHP4-208ENST00000478423 COQ8BQ96D53 544 aa13.52□□□□□ -0.25
NPHP4-208ENST00000478423 DNAJA3Q96EY1 480 aa13.52□□□□□ -0.25
NPHP4-208ENST00000478423 TOE1Q96GM8 510 aaKnown RBP13.52□□□□□ -0.25
NPHP4-208ENST00000478423 TTC3P53804 2025 aa13.52□□□□□ -0.25
NPHP4-208ENST00000478423 A0A1B0GVT2 93 aa13.52□□□□□ -0.25
NPHP4-208ENST00000478423 PEX12O00623 359 aa13.52□□□□□ -0.25
NPHP4-208ENST00000478423 SCO2O43819 266 aa13.52□□□□□ -0.25
NPHP4-208ENST00000478423 NOS1APO75052 506 aaPredicted RBP13.52□□□□□ -0.25
NPHP4-208ENST00000478423 DDCP20711 480 aa13.52□□□□□ -0.25
NPHP4-208ENST00000478423 SLC25A24Q6NUK1 477 aa13.52□□□□□ -0.25
NPHP4-208ENST00000478423 HS3ST5Q8IZT8 346 aa13.52□□□□□ -0.25
NPHP4-208ENST00000478423 ZNF675Q8TD23 568 aa13.52□□□□□ -0.25
NPHP4-208ENST00000478423 WBP2Q969T9 261 aa13.52□□□□□ -0.25
NPHP4-208ENST00000478423 METTL2AQ96IZ6 378 aaKnown RBP13.52□□□□□ -0.25
NPHP4-208ENST00000478423 ERMAPQ96PL5 475 aaPredicted RBP13.52□□□□□ -0.25
NPHP4-208ENST00000478423 OR6C2Q9NZP2 312 aa13.52□□□□□ -0.25
NPHP4-208ENST00000478423 COL4A1P02462 1669 aa13.52□□□□□ -0.25
NPHP4-208ENST00000478423 NPIPA5E9PKD4 350 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 CCRL2O00421 344 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 PDCD5O14737 125 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 LAMTOR5O43504 91 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 PTGER1P34995 402 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 RNF111Q6ZNA4 994 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 Q6ZSR9 355 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 SPATC1Q76KD6 591 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 PLXDC1Q8IUK5 500 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 OR2L5Q8NG80 312 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 TNFAIP8L1Q8WVP5 186 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 MR1Q95460 341 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 HHIPQ96QV1 700 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 MGLLQ99685 303 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 LGR4Q9BXB1 951 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 SLC6A16Q9GZN6 736 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 GRHPRQ9UBQ7 328 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 NPIPA1Q9UND3 350 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 ENTPD2Q9Y5L3 495 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 GPR89AB7ZAQ6 455 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 H3BSH0 61 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 PSMD9O00233 223 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 KLHL18O94889 574 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 ZDHHC11BP0C7U3 371 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 GPR89BP0CG08 455 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 LINGO2Q7L985 606 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 LHFPL3Q86UP9 236 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 CHERPQ8IWX8 916 aaKnown RBP13.51□□□□□ -0.25
NPHP4-208ENST00000478423 NRG4Q8WWG1 115 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 LRR1Q96L50 414 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 SECISBP2Q96T21 854 aaKnown RBP13.51□□□□□ -0.25
NPHP4-208ENST00000478423 ZNF696Q9H7X3 374 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 PTGES2Q9H7Z7 377 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 PAK6Q9NQU5 681 aaPredicted RBP13.51□□□□□ -0.25
NPHP4-208ENST00000478423 ACTR10Q9NZ32 417 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 HYKKA2RU49 373 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 SLC35F4A4IF30 521 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 RNASET2O00584 256 aaKnown RBP13.51□□□□□ -0.25
NPHP4-208ENST00000478423 HMGN2P05204 90 aaKnown RBP13.51□□□□□ -0.25
NPHP4-208ENST00000478423 TGFBR2P37173 567 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 MMP12P39900 470 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 SELENOWP63302 87 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 PRDX1Q06830 199 aaKnown RBP13.51□□□□□ -0.25
NPHP4-208ENST00000478423 PIN1Q13526 163 aaPredicted RBP13.51□□□□□ -0.25
NPHP4-208ENST00000478423 TSPYL5Q86VY4 417 aaPredicted RBP13.51□□□□□ -0.25
NPHP4-208ENST00000478423 PELOQ9BRX2 385 aaKnown RBP13.51□□□□□ -0.25
NPHP4-208ENST00000478423 PRSS16Q9NQE7 514 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 DCAF13Q9NV06 445 aaKnown RBP13.51□□□□□ -0.25
NPHP4-208ENST00000478423 CUEDC1Q9NWM3 386 aaPredicted RBP13.51□□□□□ -0.25
NPHP4-208ENST00000478423 A0A1W2PRQ8 180 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 FAM172BPA6NC97 362 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 SLC1A7O00341 560 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 CLEC3AO75596 197 aa13.51□□□□□ -0.25
NPHP4-208ENST00000478423 MRPL3P09001 348 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms