RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 ST13P5Q8NFI4 369 aaPredicted RBP11.53□□□□□ -0.56
PTPRF-212ENST00000477970 SUN3Q8TAQ9 357 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 UCK2Q9BZX2 261 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 KLHL31Q9H511 634 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 XKR8Q9H6D3 395 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 HMG20AQ9NP66 347 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 NTMQ9P121 344 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 OSGIN1Q9UJX0 560 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 GPSM3Q9Y4H4 160 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 KLK4Q9Y5K2 254 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 C4orf51C9J302 202 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 CLDN25C9JDP6 229 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 TOR1BO14657 336 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 TNFRSF10CO14798 259 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 ADAM23O75077 832 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 FHP07954 510 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 F3P13726 295 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 MAPK10P53779 464 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 RPS15AP62244 130 aaKnown RBP11.53□□□□□ -0.56
PTPRF-212ENST00000477970 RPS26P62854 115 aaKnown RBP11.53□□□□□ -0.56
PTPRF-212ENST00000477970 RELAQ04206 551 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 SLAMF1Q13291 335 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 NFATC4Q14934 902 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 SLC25A30Q5SVS4 291 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 Q6ZPB1 254 aaPredicted RBP11.53□□□□□ -0.56
PTPRF-212ENST00000477970 ZNF367Q7RTV3 350 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 ADCK2Q7Z695 626 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 TAGAPQ8N103 731 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 SLC22A18Q96BI1 424 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 ROGDIQ9GZN7 287 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 PLEKHM1Q9Y4G2 1056 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 A0A1W2PR48 441 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 M0R082 166 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 SYT5O00445 386 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 SLC28A2O43868 658 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 SEMA7AO75326 666 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 CD72P21854 359 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 NCBP2P52298 156 aaKnown RBP eCLIP11.53□□□□□ -0.56
PTPRF-212ENST00000477970 COX10Q12887 443 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 DCST1Q5T197 706 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 FBXL6Q8N531 539 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 CHPT1Q8WUD6 406 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 GAL3ST3Q96A11 431 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 HSPBAP1Q96EW2 488 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 PINK1Q9BXM7 581 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 SLC25A19Q9HC21 320 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 FGF22Q9HCT0 170 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 PRDM8Q9NQV8 689 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 IMPAD1Q9NX62 359 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 SEC14L3Q9UDX4 400 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 DUSP12Q9UNI6 340 aa11.53□□□□□ -0.56
PTPRF-212ENST00000477970 TRBV4-1A0A0J9YWV2 114 aa11.52□□□□□ -0.56
PTPRF-212ENST00000477970 ERI3O43414 337 aaKnown RBP11.52□□□□□ -0.56
PTPRF-212ENST00000477970 PROM1O43490 865 aa11.52□□□□□ -0.56
PTPRF-212ENST00000477970 TNFSF14O43557 240 aa11.52□□□□□ -0.56
PTPRF-212ENST00000477970 CBFA2T3O75081 653 aa11.52□□□□□ -0.56
PTPRF-212ENST00000477970 CHRM5P08912 532 aaPredicted RBP11.52□□□□□ -0.56
PTPRF-212ENST00000477970 IFI6P09912 130 aa11.52□□□□□ -0.56
PTPRF-212ENST00000477970 CD36P16671 472 aa11.52□□□□□ -0.56
PTPRF-212ENST00000477970 SOX9P48436 509 aa11.52□□□□□ -0.56
PTPRF-212ENST00000477970 SEC13P55735 322 aa11.52□□□□□ -0.56
PTPRF-212ENST00000477970 MEDAGQ5VYS4 303 aa11.52□□□□□ -0.56
PTPRF-212ENST00000477970 C19orf48Q6RUI8 117 aa11.52□□□□□ -0.56
PTPRF-212ENST00000477970 CCDC81Q6ZN84 652 aa11.52□□□□□ -0.56
PTPRF-212ENST00000477970 SLC46A3Q7Z3Q1 461 aa11.52□□□□□ -0.56
PTPRF-212ENST00000477970 SLCO6A1Q86UG4 719 aa11.52□□□□□ -0.56
PTPRF-212ENST00000477970 ZFPM2Q8WW38 1151 aa11.52□□□□□ -0.56
PTPRF-212ENST00000477970 ZCCHC3Q9NUD5 404 aaKnown RBP11.52□□□□□ -0.56
PTPRF-212ENST00000477970 SCHIP1Q9P0W5 487 aaPredicted RBP11.52□□□□□ -0.56
PTPRF-212ENST00000477970 C5AR2Q9P296 337 aa11.52□□□□□ -0.56
PTPRF-212ENST00000477970 A4GNTQ9UNA3 340 aa11.52□□□□□ -0.56
PTPRF-212ENST00000477970 ERGIC3Q9Y282 383 aa11.52□□□□□ -0.56
PTPRF-212ENST00000477970 SNX11Q9Y5W9 270 aa11.52□□□□□ -0.56
PTPRF-212ENST00000477970 DGKBQ9Y6T7 804 aa11.52□□□□□ -0.56
PTPRF-212ENST00000477970 OR52A4PA6NMU1 304 aa11.52□□□□□ -0.57
PTPRF-212ENST00000477970 PDZK1P1A8MUH7 402 aa11.52□□□□□ -0.57
PTPRF-212ENST00000477970 M0R3G1 203 aa11.52□□□□□ -0.57
PTPRF-212ENST00000477970 SULT1C4O75897 302 aa11.52□□□□□ -0.57
PTPRF-212ENST00000477970 AIFM1O95831 613 aa11.52□□□□□ -0.57
PTPRF-212ENST00000477970 LGI1O95970 557 aa11.52□□□□□ -0.57
PTPRF-212ENST00000477970 OR12D1P0DN82 309 aa11.52□□□□□ -0.57
PTPRF-212ENST00000477970 MRPS21P82921 87 aaKnown RBP11.52□□□□□ -0.57
PTPRF-212ENST00000477970 TP53BP2Q13625 1128 aa11.52□□□□□ -0.57
PTPRF-212ENST00000477970 LRRC32Q14392 662 aa11.52□□□□□ -0.57
PTPRF-212ENST00000477970 GANABQ14697 944 aaKnown RBP11.52□□□□□ -0.57
PTPRF-212ENST00000477970 AMIGO1Q86WK6 493 aa11.52□□□□□ -0.57
PTPRF-212ENST00000477970 CACUL1Q86Y37 369 aa11.52□□□□□ -0.57
PTPRF-212ENST00000477970 KLK6Q92876 244 aa11.52□□□□□ -0.57
PTPRF-212ENST00000477970 LGALS12Q96DT0 336 aa11.52□□□□□ -0.57
PTPRF-212ENST00000477970 TM4SF19Q96DZ7 209 aa11.52□□□□□ -0.57
PTPRF-212ENST00000477970 Q96MT0 163 aa11.52□□□□□ -0.57
PTPRF-212ENST00000477970 ZNF681Q96N22 645 aa11.52□□□□□ -0.57
PTPRF-212ENST00000477970 BBS4Q96RK4 519 aa11.52□□□□□ -0.57
PTPRF-212ENST00000477970 RPP25Q9BUL9 199 aaKnown RBP11.52□□□□□ -0.57
PTPRF-212ENST00000477970 CLN6Q9NWW5 311 aa11.52□□□□□ -0.57
PTPRF-212ENST00000477970 GALNT8Q9NY28 637 aa11.52□□□□□ -0.57
PTPRF-212ENST00000477970 CALML5Q9NZT1 146 aa11.52□□□□□ -0.57
PTPRF-212ENST00000477970 ENTPD4Q9Y227 616 aa11.52□□□□□ -0.57
PTPRF-212ENST00000477970 NCKAP1Q9Y2A7 1128 aa11.52□□□□□ -0.57
PTPRF-212ENST00000477970 EMC8O43402 210 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms