RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	SAE1	Q9UBE0	346 aa	Predicted RBP	4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	MYOT	Q9UBF9	498 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	POLG2	Q9UHN1	485 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	MUTYH	Q9UIF7	546 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	GABRQ	Q9UN88	632 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	GSTK1	Q9Y2Q3	226 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	COA3	Q9Y2R0	106 aa	Predicted RBP	4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	DMRT1	Q9Y5R6	373 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	NUBP2	Q9Y5Y2	271 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	GPR45	Q9Y5Y3	372 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	UBIAD1	Q9Y5Z9	338 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	NPTN	Q9Y639	398 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	CDH10	Q9Y6N8	788 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	PCNT	O95613	3336 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	KAT6A	Q92794	2004 aa		4.48	□□□□□ -1.69
PTCD3-212	ENST00000477520	MYH9	P35579	1960 aa	Known RBP	4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	IGLV3-22	A0A075B6J6	115 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	SYNJ2BP-COX16	A0A087WUM0	186 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	MEIKIN	A0A087WXM9	373 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	LOC100506127	A0A0U1RQW1	187 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	ZCWPW2	A0A1B0GU75	182 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520		A0A1W2PRQ8	180 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	CIB4	A0PJX0	185 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	ELOVL7	A1L3X0	281 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	PMS2P1	A4D2B8	440 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	SLC9B1P1	A6NJY1	282 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	HMSD	A8MTL9	139 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	LINC00587	B1AMM8	73 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	FAM220BP	B1ANY3	271 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520		K7ERI5	159 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	ACKR2	O00590	384 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	IMPA2	O14732	288 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	PDCD5	O14737	125 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	PLA2G10	O15496	165 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	CHP2	O43745	196 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	NBN	O60934	754 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	GPX5	O75715	221 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	KRT33A	O76009	404 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	RGS11	O94810	467 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	METTL18	O95568	372 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	AP2A1	O95782	977 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	MLYCD	O95822	493 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	SNAI1	O95863	264 aa	Predicted RBP	4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	LCK	P06239	509 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	SBK3	P0C264	359 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	ZNF806	P0C7X5	589 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	PRR35	P0CG20	571 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	ZNF888	P0CJ79	500 aa	Predicted RBP	4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	SLC35E2B	P0CK96	405 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	TXN	P10599	105 aa	Known RBP	4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	G6PD	P11413	515 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	ANXA8	P13928	327 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	JUP	P14923	745 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	TSPAN8	P19075	237 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	TNNI1	P19237	187 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	CAPN3	P20807	821 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	WARS	P23381	471 aa	Known RBP	4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	DNASE1	P24855	282 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	MGAT1	P26572	445 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	CTGF	P29279	349 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	SLC6A1	P30531	599 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	LCN1	P31025	176 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	FMO3	P31513	532 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	AKT1	P31749	480 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	YWHAB	P31946	246 aa	Known RBP	4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	SFN	P31947	248 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	GK	P32189	559 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	ICAM3	P32942	547 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	ACSL1	P33121	698 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	GGT2	P36268	569 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	PIGA	P37287	484 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	MATK	P42679	507 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	GIPR	P48546	466 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	PIK3CG	P48736	1102 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	POLR2J	P52435	117 aa	Known RBP	4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	RAB5B	P61020	215 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	SNRPD2	P62316	118 aa	Known RBP	4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	HERVK_113	P63132	956 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	DEFA6	Q01524	100 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	IL1RL1	Q01638	556 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	ZNF155	Q12901	538 aa	Predicted RBP	4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	NPRL3	Q12980	569 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	MAD2L1	Q13257	205 aa	Predicted RBP	4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	TDG	Q13569	410 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	C1D	Q13901	141 aa	Known RBP	4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	HNF4G	Q14541	408 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	PTGR1	Q14914	329 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	OPCML	Q14982	345 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	PON3	Q15166	354 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	ZMYND11	Q15326	602 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	DPYSL2	Q16555	572 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	SYT16	Q17RD7	645 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	VPS26B	Q4G0F5	336 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	PTPN20	Q4JDL3	420 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	PYDC2	Q56P42	97 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	ZNF628	Q5EBL2	1059 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	TECRL	Q5HYJ1	363 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	C3orf38	Q5JPI3	329 aa		4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	CELF3	Q5SZQ8	465 aa	Known RBP	4.47	□□□□□ -1.69
PTCD3-212	ENST00000477520	AVPI1	Q5T686	147 aa		4.47	□□□□□ -1.69

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