RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 IL23RQ5VWK5 629 aa16.54■□□□□ 0.24
SMIM4-202ENST00000476842 FAM180BQ6P0A1 224 aa16.54■□□□□ 0.24
SMIM4-202ENST00000476842 CCDC116Q8IYX3 515 aa16.54■□□□□ 0.24
SMIM4-202ENST00000476842 LRRC34Q8IZ02 419 aa16.54■□□□□ 0.24
SMIM4-202ENST00000476842 FNDC5Q8NAU1 212 aa16.54■□□□□ 0.24
SMIM4-202ENST00000476842 CATSPER1Q8NEC5 780 aa16.54■□□□□ 0.24
SMIM4-202ENST00000476842 LRRC8CQ8TDW0 803 aa16.54■□□□□ 0.24
SMIM4-202ENST00000476842 DOK4Q8TEW6 326 aa16.54■□□□□ 0.24
SMIM4-202ENST00000476842 THAP3Q8WTV1 239 aaPredicted RBP16.54■□□□□ 0.24
SMIM4-202ENST00000476842 ZNF764Q96H86 408 aaPredicted RBP16.54■□□□□ 0.24
SMIM4-202ENST00000476842 TSSK3Q96PN8 268 aa16.54■□□□□ 0.24
SMIM4-202ENST00000476842 NUF2Q9BZD4 464 aa16.54■□□□□ 0.24
SMIM4-202ENST00000476842 MEAF6Q9HAF1 191 aa16.54■□□□□ 0.24
SMIM4-202ENST00000476842 GIMAP4Q9NUV9 329 aa16.54■□□□□ 0.24
SMIM4-202ENST00000476842 MYOTQ9UBF9 498 aa16.54■□□□□ 0.24
SMIM4-202ENST00000476842 OR6C76A6NM76 312 aa16.53■□□□□ 0.24
SMIM4-202ENST00000476842 GABRR3A8MPY1 467 aa16.53■□□□□ 0.24
SMIM4-202ENST00000476842 FCHO1O14526 889 aa16.53■□□□□ 0.24
SMIM4-202ENST00000476842 HDAC3O15379 428 aa16.53■□□□□ 0.24
SMIM4-202ENST00000476842 TRHRP34981 398 aaPredicted RBP16.53■□□□□ 0.24
SMIM4-202ENST00000476842 CD96P40200 585 aa16.53■□□□□ 0.24
SMIM4-202ENST00000476842 TNFSF10P50591 281 aa16.53■□□□□ 0.24
SMIM4-202ENST00000476842 SLC37A1P57057 533 aa16.53■□□□□ 0.24
SMIM4-202ENST00000476842 TUBA3CQ13748 450 aa16.53■□□□□ 0.24
SMIM4-202ENST00000476842 C6orf163Q5TEZ5 329 aa16.53■□□□□ 0.24
SMIM4-202ENST00000476842 TUBA3EQ6PEY2 450 aa16.53■□□□□ 0.24
SMIM4-202ENST00000476842 RNF111Q6ZNA4 994 aa16.53■□□□□ 0.24
SMIM4-202ENST00000476842 WDR75Q8IWA0 830 aaKnown RBP16.53■□□□□ 0.24
SMIM4-202ENST00000476842 LIX1Q8N485 282 aa16.53■□□□□ 0.24
SMIM4-202ENST00000476842 Q8NA96 180 aa16.53■□□□□ 0.24
SMIM4-202ENST00000476842 OR7G1Q8NGA0 311 aa16.53■□□□□ 0.24
SMIM4-202ENST00000476842 DYDC1Q8WWB3 177 aa16.53■□□□□ 0.24
SMIM4-202ENST00000476842 CTHRC1Q96CG8 243 aa16.53■□□□□ 0.24
SMIM4-202ENST00000476842 MTERF3Q96E29 417 aa16.53■□□□□ 0.24
SMIM4-202ENST00000476842 PPP1R36Q96LQ0 422 aa16.53■□□□□ 0.24
SMIM4-202ENST00000476842 BBS4Q96RK4 519 aa16.53■□□□□ 0.24
SMIM4-202ENST00000476842 UTP23Q9BRU9 249 aaKnown RBP16.53■□□□□ 0.24
SMIM4-202ENST00000476842 REEP4Q9H6H4 257 aa16.53■□□□□ 0.24
SMIM4-202ENST00000476842 ASIC5Q9NY37 505 aa16.53■□□□□ 0.24
SMIM4-202ENST00000476842 MAT2BQ9NZL9 334 aa16.53■□□□□ 0.24
SMIM4-202ENST00000476842 ZNF639Q9UID6 485 aa16.53■□□□□ 0.24
SMIM4-202ENST00000476842 ENTPD4Q9Y227 616 aa16.53■□□□□ 0.24
SMIM4-202ENST00000476842 EIF3LQ9Y262 564 aaKnown RBP16.53■□□□□ 0.24
SMIM4-202ENST00000476842 YARS2Q9Y2Z4 477 aaKnown RBP16.53■□□□□ 0.24
SMIM4-202ENST00000476842 DOCK10Q96BY6 2186 aa16.53■□□□□ 0.24
SMIM4-202ENST00000476842 TRAV17A0A0B4J275 112 aa16.52■□□□□ 0.24
SMIM4-202ENST00000476842 TRPC5OSA6NMA1 111 aa16.52■□□□□ 0.24
SMIM4-202ENST00000476842 SORBS2O94875 1100 aaKnown RBP16.52■□□□□ 0.24
SMIM4-202ENST00000476842 F10P00742 488 aa16.52■□□□□ 0.24
SMIM4-202ENST00000476842 CLPSP04118 112 aa16.52■□□□□ 0.24
SMIM4-202ENST00000476842 KITP10721 976 aa16.52■□□□□ 0.24
SMIM4-202ENST00000476842 SSTR4P31391 388 aa16.52■□□□□ 0.24
SMIM4-202ENST00000476842 SOX18P35713 384 aa16.52■□□□□ 0.24
SMIM4-202ENST00000476842 PDE7AQ13946 482 aa16.52■□□□□ 0.24
SMIM4-202ENST00000476842 ZNF169Q14929 603 aaPredicted RBP16.52■□□□□ 0.24
SMIM4-202ENST00000476842 COLEC12Q5KU26 742 aa16.52■□□□□ 0.24
SMIM4-202ENST00000476842 FAM111BQ6SJ93 734 aa16.52■□□□□ 0.24
SMIM4-202ENST00000476842 LARP4Q71RC2 724 aaKnown RBP eCLIP16.52■□□□□ 0.24
SMIM4-202ENST00000476842 C9orf40Q8IXQ3 194 aa16.52■□□□□ 0.24
SMIM4-202ENST00000476842 ZNF615Q8N8J6 731 aa16.52■□□□□ 0.24
SMIM4-202ENST00000476842 CLHC1Q8NHS4 586 aa16.52■□□□□ 0.24
SMIM4-202ENST00000476842 SUN3Q8TAQ9 357 aa16.52■□□□□ 0.24
SMIM4-202ENST00000476842 NUBPLQ8TB37 319 aa16.52■□□□□ 0.24
SMIM4-202ENST00000476842 PIWIL2Q8TC59 973 aaKnown RBP16.52■□□□□ 0.24
SMIM4-202ENST00000476842 ZNF675Q8TD23 568 aa16.52■□□□□ 0.24
SMIM4-202ENST00000476842 CKAP2Q8WWK9 683 aa16.52■□□□□ 0.24
SMIM4-202ENST00000476842 GFM2Q969S9 779 aaKnown RBP16.52■□□□□ 0.24
SMIM4-202ENST00000476842 C7orf26Q96N11 449 aa16.52■□□□□ 0.24
SMIM4-202ENST00000476842 C1orf50Q9BV19 199 aa16.52■□□□□ 0.24
SMIM4-202ENST00000476842 BRINP2Q9C0B6 783 aa16.52■□□□□ 0.24
SMIM4-202ENST00000476842 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.52■□□□□ 0.24
SMIM4-202ENST00000476842 TRIM45Q9H8W5 580 aaPredicted RBP16.52■□□□□ 0.24
SMIM4-202ENST00000476842 LIN28AQ9H9Z2 209 aaKnown RBP16.52■□□□□ 0.24
SMIM4-202ENST00000476842 SLAMF7Q9NQ25 335 aa16.52■□□□□ 0.24
SMIM4-202ENST00000476842 CFAP46Q8IYW2 2715 aa16.51■□□□□ 0.23
SMIM4-202ENST00000476842 SDHDO14521 159 aa16.51■□□□□ 0.23
SMIM4-202ENST00000476842 AKAP10O43572 662 aa16.51■□□□□ 0.23
SMIM4-202ENST00000476842 ITGA10O75578 1167 aa16.51■□□□□ 0.23
SMIM4-202ENST00000476842 LRATO95237 230 aa16.51■□□□□ 0.23
SMIM4-202ENST00000476842 HLCSP50747 726 aa16.51■□□□□ 0.23
SMIM4-202ENST00000476842 MPEG1Q2M385 716 aa16.51■□□□□ 0.23
SMIM4-202ENST00000476842 TRMT12Q53H54 448 aaKnown RBP16.51■□□□□ 0.23
SMIM4-202ENST00000476842 PIGGQ5H8A4 983 aa16.51■□□□□ 0.23
SMIM4-202ENST00000476842 ZNF468Q5VIY5 522 aaPredicted RBP16.51■□□□□ 0.23
SMIM4-202ENST00000476842 SLC29A4Q7RTT9 530 aa16.51■□□□□ 0.23
SMIM4-202ENST00000476842 R3HCC1LQ7Z5L2 792 aaKnown RBP16.51■□□□□ 0.23
SMIM4-202ENST00000476842 VWA5B2Q8N398 1253 aa16.51■□□□□ 0.23
SMIM4-202ENST00000476842 ADCY4Q8NFM4 1077 aa16.51■□□□□ 0.23
SMIM4-202ENST00000476842 ERP27Q96DN0 273 aa16.51■□□□□ 0.23
SMIM4-202ENST00000476842 OR10A5Q9H207 317 aa16.51■□□□□ 0.23
SMIM4-202ENST00000476842 RYDENQ9NUL5 291 aaKnown RBP16.51■□□□□ 0.23
SMIM4-202ENST00000476842 NOP53Q9NZM5 478 aaKnown RBP16.51■□□□□ 0.23
SMIM4-202ENST00000476842 MARCOQ9UEW3 520 aaPredicted RBP16.51■□□□□ 0.23
SMIM4-202ENST00000476842 ATP6V1HQ9UI12 483 aa16.51■□□□□ 0.23
SMIM4-202ENST00000476842 SPTA1P02549 2419 aa16.51■□□□□ 0.23
SMIM4-202ENST00000476842 TNRC6AQ8NDV7 1962 aaKnown RBP16.5■□□□□ 0.23
SMIM4-202ENST00000476842 WWP2O00308 870 aa16.5■□□□□ 0.23
SMIM4-202ENST00000476842 BCAS2O75934 225 aaPredicted RBP16.5■□□□□ 0.23
SMIM4-202ENST00000476842 OR2J2O76002 312 aa16.5■□□□□ 0.23
SMIM4-202ENST00000476842 G6PDP11413 515 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms