RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 EBPQ15125 230 aaKnown RBP11.52□□□□□ -0.57
SKA3-206ENST00000475251 C18orf21Q32NC0 220 aaPredicted RBP11.52□□□□□ -0.57
SKA3-206ENST00000475251 MSS51Q4VC12 460 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 HLA-DQA1Q5Y7H0 255 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 ADNP2Q6IQ32 1131 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 CXXC5Q7LFL8 322 aaKnown RBP11.52□□□□□ -0.57
SKA3-206ENST00000475251 UBE3DQ7Z6J8 389 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 GPR180Q86V85 440 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 ZC3HC1Q86WB0 502 aaKnown RBP11.52□□□□□ -0.57
SKA3-206ENST00000475251 OR4N5Q8IXE1 308 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 SPPL2AQ8TCT8 520 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 ZNF473Q8WTR7 871 aaKnown RBP11.52□□□□□ -0.57
SKA3-206ENST00000475251 RIT1Q92963 219 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 TP53INP1Q96A56 240 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 PPWD1Q96BP3 646 aaKnown RBP11.52□□□□□ -0.57
SKA3-206ENST00000475251 CMTM7Q96FZ5 175 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 WDYHV1Q96HA8 205 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 TMEM41AQ96HV5 264 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 RILPQ96NA2 401 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 TMEM79Q9BSE2 394 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 ERVK-6Q9BXR3 956 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 UGT2B28Q9BY64 529 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 ANGPTL4Q9BY76 406 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 DERL2Q9GZP9 239 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 GALNT8Q9NY28 637 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 ERVK-19Q9WJR5 959 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 SLC6A5Q9Y345 797 aa11.52□□□□□ -0.57
SKA3-206ENST00000475251 KDM4EB2RXH2 506 aaPredicted RBP11.51□□□□□ -0.57
SKA3-206ENST00000475251 HRKO00198 91 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 LRATO95237 230 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 S100BP04271 92 aaPredicted RBP11.51□□□□□ -0.57
SKA3-206ENST00000475251 PCNAP12004 261 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 GALNSP34059 522 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 ELK3P41970 407 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 CASP2P42575 452 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 HSPA7P48741 367 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 RAP1GDS1P52306 607 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 ARFIP1P53367 373 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 SLC37A1P57057 533 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 PCDH1Q08174 1060 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 MGAT5Q09328 741 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 CHIT1Q13231 466 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 SLAMF1Q13291 335 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 ZNF267Q14586 743 aaPredicted RBP11.51□□□□□ -0.57
SKA3-206ENST00000475251 KHDRBS2Q5VWX1 349 aaKnown RBP11.51□□□□□ -0.57
SKA3-206ENST00000475251 OR4C11Q6IEV9 310 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 MED27Q6P2C8 311 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 TRMT10BQ6PF06 316 aaKnown RBP11.51□□□□□ -0.57
SKA3-206ENST00000475251 ENPP6Q6UWR7 440 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 LUZP2Q86TE4 346 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 GPSM1Q86YR5 675 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 IGDCC3Q8IVU1 814 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 ZCCHC7Q8N3Z6 543 aaKnown RBP11.51□□□□□ -0.57
SKA3-206ENST00000475251 ANKRD49Q8WVL7 239 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 UCN3Q969E3 161 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 RGMAQ96B86 450 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 TSPAN17Q96FV3 270 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 MS4A14Q96JA4 679 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 Q96MF0 132 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 GNRHR2Q96P88 292 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 WDR41Q9HAD4 459 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 TEX10Q9NXF1 929 aaPredicted RBP11.51□□□□□ -0.57
SKA3-206ENST00000475251 ZNF226Q9NYT6 803 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 FETUBQ9UGM5 382 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 CHMP2BQ9UQN3 213 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 JRKLQ9Y4A0 524 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 NPFFR2Q9Y5X5 522 aa11.51□□□□□ -0.57
SKA3-206ENST00000475251 H0Y3Z8 333 aa11.5□□□□□ -0.57
SKA3-206ENST00000475251 TAPBPO15533 448 aa11.5□□□□□ -0.57
SKA3-206ENST00000475251 CCNT2O60583 730 aaKnown RBP11.5□□□□□ -0.57
SKA3-206ENST00000475251 PRAMEF4O60810 478 aa11.5□□□□□ -0.57
SKA3-206ENST00000475251 RCBTB2O95199 551 aa11.5□□□□□ -0.57
SKA3-206ENST00000475251 GPR75O95800 540 aa11.5□□□□□ -0.57
SKA3-206ENST00000475251 TGFB1P01137 390 aa11.5□□□□□ -0.57
SKA3-206ENST00000475251 KRT15P19012 456 aa11.5□□□□□ -0.57
SKA3-206ENST00000475251 CD22P20273 847 aa11.5□□□□□ -0.57
SKA3-206ENST00000475251 CHMP24386 653 aa11.5□□□□□ -0.57
SKA3-206ENST00000475251 FBXW4P57775 412 aa11.5□□□□□ -0.57
SKA3-206ENST00000475251 TAS2R39P59534 338 aa11.5□□□□□ -0.57
SKA3-206ENST00000475251 ATP6V0D1P61421 351 aa11.5□□□□□ -0.57
SKA3-206ENST00000475251 GAB1Q13480 694 aa11.5□□□□□ -0.57
SKA3-206ENST00000475251 SETDB1Q15047 1291 aa11.5□□□□□ -0.57
SKA3-206ENST00000475251 PRAMEF9Q5VWM5 478 aa11.5□□□□□ -0.57
SKA3-206ENST00000475251 STEAP4Q687X5 459 aa11.5□□□□□ -0.57
SKA3-206ENST00000475251 DGAT2L6Q6ZPD8 337 aa11.5□□□□□ -0.57
SKA3-206ENST00000475251 LRRC70Q7Z2Q7 622 aa11.5□□□□□ -0.57
SKA3-206ENST00000475251 LAS2Q8IYD9 372 aa11.5□□□□□ -0.57
SKA3-206ENST00000475251 C9orf106Q8NAJ2 232 aa11.5□□□□□ -0.57
SKA3-206ENST00000475251 PDPRQ8NCN5 879 aa11.5□□□□□ -0.57
SKA3-206ENST00000475251 DTNBP1Q96EV8 351 aa11.5□□□□□ -0.57
SKA3-206ENST00000475251 CCL19Q99731 98 aa11.5□□□□□ -0.57
SKA3-206ENST00000475251 RHOJQ9H4E5 214 aa11.5□□□□□ -0.57
SKA3-206ENST00000475251 CD274Q9NZQ7 290 aa11.5□□□□□ -0.57
SKA3-206ENST00000475251 NINQ8N4C6 2090 aa11.5□□□□□ -0.57
SKA3-206ENST00000475251 FN1P02751 2386 aaKnown RBP11.49□□□□□ -0.57
SKA3-206ENST00000475251 A0A1W2PPR1 153 aa11.49□□□□□ -0.57
SKA3-206ENST00000475251 SMAD7O15105 426 aaKnown RBP11.49□□□□□ -0.57
SKA3-206ENST00000475251 SLC35E2BP0CK96 405 aa11.49□□□□□ -0.57
SKA3-206ENST00000475251 SLC35E2P0CK97 266 aa11.49□□□□□ -0.57
SKA3-206ENST00000475251 CPN1P15169 458 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms