RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 MCM8Q9UJA3 840 aa16.57■□□□□ 0.24
UPF3A-203ENST00000474056 GRID1Q9ULK0 1009 aa16.57■□□□□ 0.24
UPF3A-203ENST00000474056 PHF3Q92576 2039 aaKnown RBP16.57■□□□□ 0.24
UPF3A-203ENST00000474056 OR6C76A6NM76 312 aa16.56■□□□□ 0.24
UPF3A-203ENST00000474056 UBFD1O14562 309 aaKnown RBP16.56■□□□□ 0.24
UPF3A-203ENST00000474056 COPEO14579 308 aa16.56■□□□□ 0.24
UPF3A-203ENST00000474056 CDC40O60508 579 aaKnown RBP eCLIP16.56■□□□□ 0.24
UPF3A-203ENST00000474056 GUCY1B2O75343 617 aa16.56■□□□□ 0.24
UPF3A-203ENST00000474056 ERAL1O75616 437 aaKnown RBP16.56■□□□□ 0.24
UPF3A-203ENST00000474056 PORP16435 677 aaPredicted RBP16.56■□□□□ 0.24
UPF3A-203ENST00000474056 ABOP16442 354 aa16.56■□□□□ 0.24
UPF3A-203ENST00000474056 NT5EP21589 574 aa16.56■□□□□ 0.24
UPF3A-203ENST00000474056 RAE1P78406 368 aaKnown RBP16.56■□□□□ 0.24
UPF3A-203ENST00000474056 DUSP2Q05923 314 aa16.56■□□□□ 0.24
UPF3A-203ENST00000474056 SLC18A2Q05940 514 aa16.56■□□□□ 0.24
UPF3A-203ENST00000474056 FUT7Q11130 342 aa16.56■□□□□ 0.24
UPF3A-203ENST00000474056 ZNF791Q3KP31 576 aaPredicted RBP16.56■□□□□ 0.24
UPF3A-203ENST00000474056 ZNF787Q6DD87 383 aa16.56■□□□□ 0.24
UPF3A-203ENST00000474056 FAM180BQ6P0A1 224 aa16.56■□□□□ 0.24
UPF3A-203ENST00000474056 ZNF441Q8N8Z8 693 aa16.56■□□□□ 0.24
UPF3A-203ENST00000474056 CCDC63Q8NA47 563 aa16.56■□□□□ 0.24
UPF3A-203ENST00000474056 SPACA9Q96E40 222 aaPredicted RBP16.56■□□□□ 0.24
UPF3A-203ENST00000474056 CCDC126Q96EE4 140 aa16.56■□□□□ 0.24
UPF3A-203ENST00000474056 APIPQ96GX9 242 aa16.56■□□□□ 0.24
UPF3A-203ENST00000474056 SGCZQ96LD1 299 aa16.56■□□□□ 0.24
UPF3A-203ENST00000474056 TTTY12Q9BZ98 90 aa16.56■□□□□ 0.24
UPF3A-203ENST00000474056 SH2D2AQ9NP31 389 aa16.56■□□□□ 0.24
UPF3A-203ENST00000474056 SACM1LQ9NTJ5 587 aa16.56■□□□□ 0.24
UPF3A-203ENST00000474056 A0A1B0GTH9 108 aa16.55■□□□□ 0.24
UPF3A-203ENST00000474056 TLDC2A0PJX2 215 aa16.55■□□□□ 0.24
UPF3A-203ENST00000474056 FAM166BA8MTA8 275 aa16.55■□□□□ 0.24
UPF3A-203ENST00000474056 P04436 131 aa16.55■□□□□ 0.24
UPF3A-203ENST00000474056 KRT4P19013 534 aa16.55■□□□□ 0.24
UPF3A-203ENST00000474056 CNR1P21554 472 aa16.55■□□□□ 0.24
UPF3A-203ENST00000474056 DEKP35659 375 aaKnown RBP16.55■□□□□ 0.24
UPF3A-203ENST00000474056 FEN1P39748 380 aaKnown RBP16.55■□□□□ 0.24
UPF3A-203ENST00000474056 DNASE1L1P49184 302 aa16.55■□□□□ 0.24
UPF3A-203ENST00000474056 NAGLUP54802 743 aa16.55■□□□□ 0.24
UPF3A-203ENST00000474056 TRA2BP62995 288 aaKnown RBP16.55■□□□□ 0.24
UPF3A-203ENST00000474056 ADORA2A-AS1P86434 159 aa16.55■□□□□ 0.24
UPF3A-203ENST00000474056 PLGLB1Q02325 96 aa16.55■□□□□ 0.24
UPF3A-203ENST00000474056 BNC2Q6ZN30 1099 aaPredicted RBP16.55■□□□□ 0.24
UPF3A-203ENST00000474056 FRMD7Q6ZUT3 714 aa16.55■□□□□ 0.24
UPF3A-203ENST00000474056 FAM47EQ6ZV65 393 aa16.55■□□□□ 0.24
UPF3A-203ENST00000474056 SLC15A4Q8N697 577 aa16.55■□□□□ 0.24
UPF3A-203ENST00000474056 GBP7Q8N8V2 638 aaPredicted RBP16.55■□□□□ 0.24
UPF3A-203ENST00000474056 KLHL29Q96CT2 875 aa16.55■□□□□ 0.24
UPF3A-203ENST00000474056 FAM173AQ9BQD7 235 aa16.55■□□□□ 0.24
UPF3A-203ENST00000474056 OR10A5Q9H207 317 aa16.55■□□□□ 0.24
UPF3A-203ENST00000474056 HEY2Q9UBP5 337 aa16.55■□□□□ 0.24
UPF3A-203ENST00000474056 C2orf92A0A1B0GVN3 265 aa16.54■□□□□ 0.24
UPF3A-203ENST00000474056 GOLGA6L10A6NI86 522 aa16.54■□□□□ 0.24
UPF3A-203ENST00000474056 PCDH7O60245 1069 aa16.54■□□□□ 0.24
UPF3A-203ENST00000474056 IL3P08700 152 aa16.54■□□□□ 0.24
UPF3A-203ENST00000474056 SOX18P35713 384 aa16.54■□□□□ 0.24
UPF3A-203ENST00000474056 PIGAP37287 484 aa16.54■□□□□ 0.24
UPF3A-203ENST00000474056 DCTP40126 519 aa16.54■□□□□ 0.24
UPF3A-203ENST00000474056 ALDH9A1P49189 494 aa16.54■□□□□ 0.24
UPF3A-203ENST00000474056 DNAJB13P59910 316 aa16.54■□□□□ 0.24
UPF3A-203ENST00000474056 PPIAP62937 165 aaKnown RBP16.54■□□□□ 0.24
UPF3A-203ENST00000474056 BTKQ06187 659 aa16.54■□□□□ 0.24
UPF3A-203ENST00000474056 ACSM2AQ08AH3 577 aa16.54■□□□□ 0.24
UPF3A-203ENST00000474056 SPIN4Q56A73 249 aa16.54■□□□□ 0.24
UPF3A-203ENST00000474056 C6orf163Q5TEZ5 329 aa16.54■□□□□ 0.24
UPF3A-203ENST00000474056 ACSM2BQ68CK6 577 aa16.54■□□□□ 0.24
UPF3A-203ENST00000474056 FAM111BQ6SJ93 734 aa16.54■□□□□ 0.24
UPF3A-203ENST00000474056 GK5Q6ZS86 529 aa16.54■□□□□ 0.24
UPF3A-203ENST00000474056 NCCRP1Q6ZVX7 275 aaPredicted RBP16.54■□□□□ 0.24
UPF3A-203ENST00000474056 ZNF615Q8N8J6 731 aa16.54■□□□□ 0.24
UPF3A-203ENST00000474056 PAQR8Q8TEZ7 354 aa16.54■□□□□ 0.24
UPF3A-203ENST00000474056 CNRIP1Q96F85 164 aaPredicted RBP16.54■□□□□ 0.24
UPF3A-203ENST00000474056 PHF12Q96QT6 1004 aa16.54■□□□□ 0.24
UPF3A-203ENST00000474056 FAIM2Q9BWQ8 316 aa16.54■□□□□ 0.24
UPF3A-203ENST00000474056 BRINP2Q9C0B6 783 aa16.54■□□□□ 0.24
UPF3A-203ENST00000474056 DEFB127Q9H1M4 99 aa16.54■□□□□ 0.24
UPF3A-203ENST00000474056 TNFRSF12AQ9NP84 129 aa16.54■□□□□ 0.24
UPF3A-203ENST00000474056 PLSCR2Q9NRY7 297 aa16.54■□□□□ 0.24
UPF3A-203ENST00000474056 OXSMQ9NWU1 459 aa16.54■□□□□ 0.24
UPF3A-203ENST00000474056 TUBA8Q9NY65 449 aaPredicted RBP16.54■□□□□ 0.24
UPF3A-203ENST00000474056 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.54■□□□□ 0.24
UPF3A-203ENST00000474056 DTX4Q9Y2E6 619 aa16.54■□□□□ 0.24
UPF3A-203ENST00000474056 V9GYY5 206 aaPredicted RBP16.54■□□□□ 0.24
UPF3A-203ENST00000474056 UNC79Q9P2D8 2635 aa16.53■□□□□ 0.24
UPF3A-203ENST00000474056 SERTM1A2A2V5 107 aa16.53■□□□□ 0.24
UPF3A-203ENST00000474056 CCDC151A5D8V7 595 aa16.53■□□□□ 0.24
UPF3A-203ENST00000474056 ACOT7O00154 380 aa16.53■□□□□ 0.24
UPF3A-203ENST00000474056 PDE9AO76083 593 aa16.53■□□□□ 0.24
UPF3A-203ENST00000474056 GLSO94925 669 aaPredicted RBP16.53■□□□□ 0.24
UPF3A-203ENST00000474056 NUDT17P0C025 328 aa16.53■□□□□ 0.24
UPF3A-203ENST00000474056 FBXO45P0C2W1 286 aa16.53■□□□□ 0.24
UPF3A-203ENST00000474056 ESRRAP11474 423 aaPredicted RBP16.53■□□□□ 0.24
UPF3A-203ENST00000474056 CPA3P15088 417 aa16.53■□□□□ 0.24
UPF3A-203ENST00000474056 S1PR1P21453 382 aa16.53■□□□□ 0.24
UPF3A-203ENST00000474056 TIA1P31483 386 aaKnown RBP eCLIP16.53■□□□□ 0.24
UPF3A-203ENST00000474056 MGAT2Q10469 447 aa16.53■□□□□ 0.24
UPF3A-203ENST00000474056 FOXO1Q12778 655 aa16.53■□□□□ 0.24
UPF3A-203ENST00000474056 PRICKLE4Q2TBC4 344 aa16.53■□□□□ 0.24
UPF3A-203ENST00000474056 CFAP157Q5JU67 520 aa16.53■□□□□ 0.24
UPF3A-203ENST00000474056 PRAMEF20Q5VT98 475 aa16.53■□□□□ 0.24
UPF3A-203ENST00000474056 SLC22A10Q63ZE4 541 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms