RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 LGR4Q9BXB1 951 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 RNF208Q9H0X6 261 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 KCNK12Q9HB15 430 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 CTPS2Q9NRF8 586 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 MAN2C1Q9NTJ4 1040 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 TMEM39AQ9NV64 488 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 MARK1Q9P0L2 795 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 ACAD8Q9UKU7 415 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 MKLN1Q9UL63 735 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 YARS2Q9Y2Z4 477 aaKnown RBP10.36□□□□□ -0.75
C9orf3-214ENST00000473778 MUC22E2RYF6 1773 aaPredicted RBP10.36□□□□□ -0.75
C9orf3-214ENST00000473778 H7BY64 318 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 AGRPO00253 132 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 CAPN5O15484 640 aaPredicted RBP10.36□□□□□ -0.75
C9orf3-214ENST00000473778 PDPK1O15530 556 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 DYRK3O43781 588 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 MPZL2O60487 215 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 SNX4O95219 450 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 GNRH1P01148 92 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 TNNI3P19429 210 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 AZGP1P25311 298 aaKnown RBP10.36□□□□□ -0.75
C9orf3-214ENST00000473778 SOX6P35712 828 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 PPM1AP35813 382 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 FRKP42685 505 aaPredicted RBP10.36□□□□□ -0.75
C9orf3-214ENST00000473778 XKP51811 444 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 MXD1Q05195 221 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 TARDBPQ13148 414 aaKnown RBP eCLIP10.36□□□□□ -0.75
C9orf3-214ENST00000473778 C9orf64Q5T6V5 341 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 LIPKQ5VXJ0 399 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 FGF11Q92914 225 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 LRIG1Q96JA1 1093 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 ZFYVE19Q96K21 471 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 PRAP1Q96NZ9 151 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 DPEP2Q9H4A9 486 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 SEMA3GQ9NS98 782 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 SNTG1Q9NSN8 517 aa10.36□□□□□ -0.75
C9orf3-214ENST00000473778 FBXO9Q9UK97 447 aaPredicted RBP10.36□□□□□ -0.75
C9orf3-214ENST00000473778 TRPM6Q9BX84 2022 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 A0A1W2PPV9 198 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 A0A1W2PS29 197 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 SMIM30A4D0T7 59 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 C5orf58C9J3I9 102 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 RGS5O15539 181 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 ASNA1O43681 348 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 PI15O43692 258 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 LCMT2O60294 686 aaKnown RBP10.35□□□□□ -0.75
C9orf3-214ENST00000473778 CRYZL1O95825 349 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 H1F0P07305 194 aaKnown RBP10.35□□□□□ -0.75
C9orf3-214ENST00000473778 OR12D1P0DN82 309 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 CEBPBP17676 345 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 MMP11P24347 488 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 CXCR2P25025 360 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 CSTF2P33240 577 aaKnown RBP eCLIP10.35□□□□□ -0.75
C9orf3-214ENST00000473778 SLC6A11P48066 632 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 HTRA3P83110 453 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 FUT5Q11128 374 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 DEFB115Q30KQ5 88 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 CCDC58Q4VC31 144 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 ACSM5Q6NUN0 579 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 LCTLQ6UWM7 567 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 ZER1Q7Z7L7 766 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 PHC2Q8IXK0 858 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 FAM20CQ8IXL6 584 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 GPR65Q8IYL9 337 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 NANOGP1Q8N7R0 232 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 KLHL6Q8WZ60 621 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 OR5P2Q8WZ92 322 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 SMPDL3AQ92484 453 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 TP53INP1Q96A56 240 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 ZNF354BQ96LW1 612 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 TOX2Q96NM4 488 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 MACROD1Q9BQ69 325 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 PRR14Q9BWN1 585 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 TSSK6Q9BXA6 273 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 PLA2G12AQ9BZM1 189 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 POLR2J3Q9H1A7 115 aaKnown RBP10.35□□□□□ -0.75
C9orf3-214ENST00000473778 NDUFB11Q9NX14 153 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 TVP23BQ9NYZ1 205 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 TRANK1O15050 2925 aa10.35□□□□□ -0.75
C9orf3-214ENST00000473778 A0A075B6Q4 140 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 PNMA8CA0A1B0GUJ8 204 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 C4orf51C9J302 202 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 TLX2O43763 284 aaPredicted RBP10.34□□□□□ -0.75
C9orf3-214ENST00000473778 NME6O75414 186 aaPredicted RBP10.34□□□□□ -0.75
C9orf3-214ENST00000473778 CLEC2LP0C7M8 214 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 MSL3P1P0C860 447 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 ALPPL2P10696 532 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 ERGP11308 486 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 ADRB3P13945 408 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 HOXB3P14651 431 aaPredicted RBP10.34□□□□□ -0.75
C9orf3-214ENST00000473778 PRKACBP22694 351 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 ETV5P41161 510 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 ETV1P50549 477 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 GAS1P54826 345 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 MADCAM1Q13477 382 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 AGAP6Q5VW22 663 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 PODNL1Q6PEZ8 512 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 TMC5Q6UXY8 1006 aa10.34□□□□□ -0.75
C9orf3-214ENST00000473778 GRASPQ7Z6J2 395 aaPredicted RBP10.34□□□□□ -0.75
C9orf3-214ENST00000473778 PDZD3Q86UT5 571 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms