RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 ETV4P43268 484 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 HTR6P50406 440 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 SIM1P81133 766 aaPredicted RBP14.36□□□□□ -0.11
LIMS2-213ENST00000469300 PITPNAQ00169 270 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 PMS2P3Q13401 168 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 CDRT4Q8N9R6 151 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 OR52E1Q8NGJ3 308 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 CLCC1Q96S66 551 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 ACTRT3Q9BYD9 372 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 PCDHB14Q9Y5E9 798 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 ANKRD12Q6UB98 2062 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 TLX2O43763 284 aaPredicted RBP14.36□□□□□ -0.11
LIMS2-213ENST00000469300 INHBCP55103 352 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 SMCO1Q147U7 214 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 TOR1AIP2Q8NFQ8 470 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 ECHDC3Q96DC8 303 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 AMBNQ9NP70 447 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 DMRT3Q9NQL9 472 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 CPNE7Q9UBL6 633 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 SEC14L4Q9UDX3 406 aa14.36□□□□□ -0.11
LIMS2-213ENST00000469300 OR52A4PA6NMU1 304 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 H0YAE9 185 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 LATO43561 262 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 GATBO75879 557 aaKnown RBP14.35□□□□□ -0.11
LIMS2-213ENST00000469300 C1SP09871 688 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 GNG2P59768 71 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 VBP1P61758 197 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 ZBED5Q49AG3 693 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 TMEM225Q6GV28 225 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 LETMD1Q6P1Q0 360 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 MEIOBQ8N635 442 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 TP53INP1Q96A56 240 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 COQ8BQ96D53 544 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 DMRTB1Q96MA1 342 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 PHF12Q96QT6 1004 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 CXCL16Q9H2A7 254 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 ATPIF1Q9UII2 106 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 SIT1Q9Y3P8 196 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 FAM155AB1AL88 458 aaPredicted RBP14.35□□□□□ -0.11
LIMS2-213ENST00000469300 BCAT2O15382 392 aaPredicted RBP14.35□□□□□ -0.11
LIMS2-213ENST00000469300 GSTT2BP0CG30 244 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 SLC27A4Q6P1M0 643 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 ASB16Q96NS5 453 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 POLDIP3Q9BY77 421 aaKnown RBP14.35□□□□□ -0.11
LIMS2-213ENST00000469300 A6NCN8 305 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 PROM1O43490 865 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 MAPK3P27361 379 aaPredicted RBP14.35□□□□□ -0.11
LIMS2-213ENST00000469300 SLC9A3P48764 834 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 RORCP51449 518 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 OR2B6P58173 313 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 CLCA4Q14CN2 919 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 ADAMTSL4Q6UY14 1074 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 PCDHB16Q9NRJ7 776 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 UPB1Q9UBR1 384 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 EXOSC1Q9Y3B2 195 aaKnown RBP14.35□□□□□ -0.11
LIMS2-213ENST00000469300 TBX1O43435 398 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 CD36P16671 472 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 SLC15A1P46059 708 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 SLC6A9P48067 706 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 CSTF1Q05048 431 aaKnown RBP14.35□□□□□ -0.11
LIMS2-213ENST00000469300 HORMAD2Q8N7B1 307 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 NAA11Q9BSU3 229 aaPredicted RBP14.35□□□□□ -0.11
LIMS2-213ENST00000469300 PHF7Q9BWX1 381 aaPredicted RBP14.35□□□□□ -0.11
LIMS2-213ENST00000469300 NKIRAS2Q9NYR9 191 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 CCL26Q9Y258 94 aa14.35□□□□□ -0.11
LIMS2-213ENST00000469300 PSIP1O75475 530 aaKnown RBP14.34□□□□□ -0.11
LIMS2-213ENST00000469300 CTHP32929 405 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 KCNJ5P48544 419 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 PLP2Q04941 152 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 CAMK1Q14012 370 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 PNPLA1Q8N8W4 532 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 URB1O60287 2271 aaKnown RBP14.34□□□□□ -0.11
LIMS2-213ENST00000469300 I3L521 148 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 RNF13O43567 381 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 ORC5O43913 435 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 SRPX2O60687 465 aaPredicted RBP14.34□□□□□ -0.11
LIMS2-213ENST00000469300 DIRAS1O95057 198 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 C1orf105O95561 183 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 AHRP35869 848 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 RPL34P49207 117 aaKnown RBP14.34□□□□□ -0.11
LIMS2-213ENST00000469300 GK3PQ14409 553 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 MFSD13AQ14CX5 517 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 CES4AQ5XG92 561 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 PLEKHG7Q6ZR37 379 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 YIPF7Q8N8F6 280 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 KHSRPQ92945 711 aaKnown RBP eCLIP14.34□□□□□ -0.11
LIMS2-213ENST00000469300 MS4A4EQ96PG1 132 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 ZNF559Q9BR84 538 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 MYH7BA7E2Y1 1941 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 P04436 131 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 RLN1P04808 185 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 RPS3AP61247 264 aaKnown RBP14.34□□□□□ -0.11
LIMS2-213ENST00000469300 MOGQ16653 247 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 TMEM52BQ4KMG9 183 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 KCTD18Q6PI47 426 aaPredicted RBP14.34□□□□□ -0.11
LIMS2-213ENST00000469300 OR8H3Q8N146 312 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 OR2T33Q8NG76 320 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 NEIL2Q969S2 332 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 IL37Q9NZH6 218 aa14.34□□□□□ -0.11
LIMS2-213ENST00000469300 ABCG2Q9UNQ0 655 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 223.7 ms