RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 HNMTP50135 292 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 RAB5CP51148 216 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 STAT5BP51692 787 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 CLCN4P51793 760 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 RIDAP52758 137 aaKnown RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 CAPZA1P52907 286 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 NUDT6P53370 316 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 SESN2P58004 480 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 AP3S2P59780 193 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 CDC42P60953 191 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 RAB2AP61019 212 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 TGFB2P61812 414 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 RPS7P62081 194 aaKnown RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 RPS27AP62979 156 aaKnown RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 UBA52P62987 128 aaKnown RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 EIF5AP63241 154 aaKnown RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 GABREP78334 506 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 PIGFQ07326 219 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 ABHD18Q0P651 414 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 ECH1Q13011 328 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 GPR17Q13304 367 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 BIKQ13323 160 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 CAMK2DQ13557 499 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 ITPK1Q13572 414 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 SMAD2Q15796 467 aaKnown RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 SNAPC1Q16533 368 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 SMTNL2Q2TAL5 461 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 QRICH1Q2TAL8 776 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 LGALSLQ3ZCW2 172 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 ATP6AP1LQ52LC2 224 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 KLHL26Q53HC5 615 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 ZNF678Q5SXM1 525 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 FAM69AQ5T7M9 428 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 PLAG1Q6DJT9 500 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 TXNRD3NBQ6F5E7 133 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 HIST2H2AA3Q6FI13 130 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 OR4F3Q6IEY1 312 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 PRR5LQ6MZQ0 368 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 PAMR1Q6UXH9 720 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 WASH2PQ6VEQ5 465 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 ZPBP2Q6X784 338 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 ETV3LQ6ZN32 361 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 UBE2R2Q712K3 238 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 KCTD1Q719H9 257 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 DET1Q7L5Y6 550 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 NLRC3Q7RTR2 1065 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 IFNEQ86WN2 208 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 ZNF227Q86WZ6 799 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 XYLT1Q86Y38 959 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 PHYKPLQ8IUZ5 450 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 ZDHHC21Q8IVQ6 265 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 FAM126BQ8IXS8 530 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 CMIPQ8IY22 773 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 SLC35F3Q8IY50 421 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 ENTHD1Q8IYW4 607 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 SLC34A3Q8N130 599 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 NAGSQ8N159 534 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 NXPE1Q8N323 547 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 TMEM132CQ8N3T6 1108 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 EID2Q8N6I1 236 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 ZNF655Q8N720 491 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 PQLC3Q8N755 202 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 ZBTB34Q8NCN2 500 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 PROKR2Q8NFJ6 384 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 DNERQ8NFT8 737 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 NLGN4YQ8NFZ3 816 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 OR56A4Q8NGH8 313 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 OR52K1Q8NGK4 314 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 OR56B4Q8NH76 319 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 PHOSPHO2Q8TCD6 241 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 C15orf40Q8WUR7 153 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 TWIST2Q8WVJ9 160 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 GGHQ92820 318 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 FUBP1Q96AE4 644 aaKnown RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 ULK4Q96C45 1275 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 LRRC46Q96FV0 321 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 WBP1Q96G27 269 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 LCORQ96JN0 433 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 HIST1H2AHQ96KK5 128 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 SENP8Q96LD8 212 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 PPP1R36Q96LQ0 422 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 ZNF354BQ96LW1 612 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 MTERF1Q99551 399 aaKnown RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 ELF4Q99607 663 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 HIST1H2AJQ99878 128 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 SSX3Q99909 188 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 MAPKAP1Q9BPZ7 522 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 KCNS3Q9BQ31 491 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 DPH7Q9BTV6 452 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 IFT27Q9BW83 186 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 C1QTNF3Q9BXJ4 246 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 BEX2Q9BXY8 128 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 DEFB129Q9H1M3 183 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 DUSP15Q9H1R2 295 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 ABCG8Q9H221 673 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 OR51E2Q9H255 320 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 SLC38A1Q9H2H9 487 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 NXF3Q9H4D5 531 aaKnown RBP4.62□□□□□ -1.67
SF3B1-207ENST00000468925 GSTO2Q9H4Y5 243 aa4.62□□□□□ -1.67
SF3B1-207ENST00000468925 XKR8Q9H6D3 395 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms