RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 CCDC91Q7Z6B0 441 aa19.36■□□□□ 0.69
COL9A3-207ENST00000467819 NUDT13Q86X67 352 aa19.36■□□□□ 0.69
COL9A3-207ENST00000467819 TAGAPQ8N103 731 aa19.36■□□□□ 0.69
COL9A3-207ENST00000467819 NEIL3Q8TAT5 605 aa19.36■□□□□ 0.69
COL9A3-207ENST00000467819 ANP32BQ92688 251 aaKnown RBP19.36■□□□□ 0.69
COL9A3-207ENST00000467819 B4GALT7Q9UBV7 327 aa19.36■□□□□ 0.69
COL9A3-207ENST00000467819 L3MBTL1Q9Y468 752 aa19.36■□□□□ 0.69
COL9A3-207ENST00000467819 FAM47E-STBD1D6RA91 191 aa19.35■□□□□ 0.69
COL9A3-207ENST00000467819 KLHL2O95198 593 aa19.35■□□□□ 0.69
COL9A3-207ENST00000467819 GUCY2DQ02846 1103 aa19.35■□□□□ 0.69
COL9A3-207ENST00000467819 SNTB1Q13884 538 aaKnown RBP19.35■□□□□ 0.69
COL9A3-207ENST00000467819 RIPPLY2Q5TAB7 128 aa19.35■□□□□ 0.69
COL9A3-207ENST00000467819 OR52E8Q6IFG1 317 aa19.35■□□□□ 0.69
COL9A3-207ENST00000467819 KLC3Q6P597 504 aa19.35■□□□□ 0.69
COL9A3-207ENST00000467819 ULK2Q8IYT8 1036 aa19.35■□□□□ 0.69
COL9A3-207ENST00000467819 L3MBTL4Q8NA19 623 aa19.35■□□□□ 0.69
COL9A3-207ENST00000467819 MYRIPQ8NFW9 859 aa19.35■□□□□ 0.69
COL9A3-207ENST00000467819 WDR20Q8TBZ3 569 aa19.35■□□□□ 0.69
COL9A3-207ENST00000467819 DIO2Q92813 273 aa19.35■□□□□ 0.69
COL9A3-207ENST00000467819 ZNF597Q96LX8 424 aa19.35■□□□□ 0.69
COL9A3-207ENST00000467819 CDK15Q96Q40 435 aa19.35■□□□□ 0.69
COL9A3-207ENST00000467819 ACKR4Q9NPB9 350 aa19.35■□□□□ 0.69
COL9A3-207ENST00000467819 QPCTLQ9NXS2 382 aa19.35■□□□□ 0.69
COL9A3-207ENST00000467819 KIAA1549Q9HCM3 1950 aa19.35■□□□□ 0.69
COL9A3-207ENST00000467819 C15orf38-AP3S2A0A0A6YYH1 394 aa19.34■□□□□ 0.69
COL9A3-207ENST00000467819 C2orf92A0A1B0GVN3 265 aa19.34■□□□□ 0.69
COL9A3-207ENST00000467819 ESYT3A0FGR9 886 aa19.34■□□□□ 0.69
COL9A3-207ENST00000467819 CCDC189A1A4V9 331 aa19.34■□□□□ 0.69
COL9A3-207ENST00000467819 PGRMC2O15173 223 aa19.34■□□□□ 0.69
COL9A3-207ENST00000467819 SLC35E2P0CK97 266 aa19.34■□□□□ 0.69
COL9A3-207ENST00000467819 CD1EP15812 388 aa19.34■□□□□ 0.69
COL9A3-207ENST00000467819 TYK2P29597 1187 aa19.34■□□□□ 0.69
COL9A3-207ENST00000467819 FBXW4P57775 412 aa19.34■□□□□ 0.69
COL9A3-207ENST00000467819 BICRALQ6AI39 1079 aa19.34■□□□□ 0.69
COL9A3-207ENST00000467819 ARSKQ6UWY0 536 aa19.34■□□□□ 0.69
COL9A3-207ENST00000467819 ZZZ3Q8IYH5 903 aa19.34■□□□□ 0.69
COL9A3-207ENST00000467819 GPR78Q96P69 363 aa19.34■□□□□ 0.69
COL9A3-207ENST00000467819 VPS11Q9H270 941 aa19.34■□□□□ 0.69
COL9A3-207ENST00000467819 TEX10Q9NXF1 929 aaPredicted RBP19.34■□□□□ 0.69
COL9A3-207ENST00000467819 TNPO3Q9Y5L0 923 aaKnown RBP19.34■□□□□ 0.69
COL9A3-207ENST00000467819 MAP1AP78559 2803 aaPredicted RBP19.34■□□□□ 0.69
COL9A3-207ENST00000467819 HRNRQ86YZ3 2850 aaPredicted RBP19.33■□□□□ 0.69
COL9A3-207ENST00000467819 FOXE1O00358 373 aaPredicted RBP19.33■□□□□ 0.68
COL9A3-207ENST00000467819 TP53I11O14683 189 aa19.33■□□□□ 0.68
COL9A3-207ENST00000467819 CLDN9O95484 217 aa19.33■□□□□ 0.68
COL9A3-207ENST00000467819 CT62P0C5K7 136 aa19.33■□□□□ 0.68
COL9A3-207ENST00000467819 PIK3R1P27986 724 aa19.33■□□□□ 0.68
COL9A3-207ENST00000467819 DNAJA1P31689 397 aaKnown RBP19.33■□□□□ 0.68
COL9A3-207ENST00000467819 GALNSP34059 522 aa19.33■□□□□ 0.68
COL9A3-207ENST00000467819 SERPINB8P50452 374 aa19.33■□□□□ 0.68
COL9A3-207ENST00000467819 SLC7A5Q01650 507 aa19.33■□□□□ 0.68
COL9A3-207ENST00000467819 RPS6KA2Q15349 733 aa19.33■□□□□ 0.68
COL9A3-207ENST00000467819 TECRLQ5HYJ1 363 aa19.33■□□□□ 0.68
COL9A3-207ENST00000467819 HLA-DQA1Q5Y7H0 255 aa19.33■□□□□ 0.68
COL9A3-207ENST00000467819 TMEM198Q66K66 360 aa19.33■□□□□ 0.68
COL9A3-207ENST00000467819 PTGR2Q8N8N7 351 aaPredicted RBP19.33■□□□□ 0.68
COL9A3-207ENST00000467819 ZNF441Q8N8Z8 693 aa19.33■□□□□ 0.68
COL9A3-207ENST00000467819 OR52B6Q8NGF0 335 aa19.33■□□□□ 0.68
COL9A3-207ENST00000467819 ATP6V1E2Q96A05 226 aa19.33■□□□□ 0.68
COL9A3-207ENST00000467819 NOL11Q9H8H0 719 aaKnown RBP19.33■□□□□ 0.68
COL9A3-207ENST00000467819 CXorf21Q9HAI6 301 aa19.33■□□□□ 0.68
COL9A3-207ENST00000467819 DNAJB12Q9NXW2 375 aaKnown RBP19.33■□□□□ 0.68
COL9A3-207ENST00000467819 MED12Q93074 2177 aa19.33■□□□□ 0.68
COL9A3-207ENST00000467819 MPDZO75970 2070 aa19.32■□□□□ 0.68
COL9A3-207ENST00000467819 NF1P21359 2839 aa19.32■□□□□ 0.68
COL9A3-207ENST00000467819 CAPN14A8MX76 684 aa19.32■□□□□ 0.68
COL9A3-207ENST00000467819 KDM4EB2RXH2 506 aaPredicted RBP19.32■□□□□ 0.68
COL9A3-207ENST00000467819 OR7A17O14581 309 aa19.32■□□□□ 0.68
COL9A3-207ENST00000467819 TRIM3O75382 744 aaPredicted RBP19.32■□□□□ 0.68
COL9A3-207ENST00000467819 ALDOAP04075 364 aaKnown RBP19.32■□□□□ 0.68
COL9A3-207ENST00000467819 CCNG1P51959 295 aa19.32■□□□□ 0.68
COL9A3-207ENST00000467819 WNT3P56703 355 aa19.32■□□□□ 0.68
COL9A3-207ENST00000467819 DUSP8Q13202 625 aa19.32■□□□□ 0.68
COL9A3-207ENST00000467819 TBCELQ5QJ74 424 aa19.32■□□□□ 0.68
COL9A3-207ENST00000467819 UBAP2Q5T6F2 1119 aaKnown RBP19.32■□□□□ 0.68
COL9A3-207ENST00000467819 SYT10Q6XYQ8 523 aa19.32■□□□□ 0.68
COL9A3-207ENST00000467819 SEM1Q6ZVN7 128 aa19.32■□□□□ 0.68
COL9A3-207ENST00000467819 GALNT12Q8IXK2 581 aa19.32■□□□□ 0.68
COL9A3-207ENST00000467819 PRR22Q8IZ63 422 aa19.32■□□□□ 0.68
COL9A3-207ENST00000467819 PLD6Q8N2A8 252 aaKnown RBP19.32■□□□□ 0.68
COL9A3-207ENST00000467819 C17orf53Q8N3J3 647 aaPredicted RBP19.32■□□□□ 0.68
COL9A3-207ENST00000467819 PHF21BQ96EK2 531 aa19.32■□□□□ 0.68
COL9A3-207ENST00000467819 DOCK7Q96N67 2140 aa19.32■□□□□ 0.68
COL9A3-207ENST00000467819 RILPQ96NA2 401 aa19.32■□□□□ 0.68
COL9A3-207ENST00000467819 SERPINI1Q99574 410 aa19.32■□□□□ 0.68
COL9A3-207ENST00000467819 ZNF358Q9NW07 568 aa19.32■□□□□ 0.68
COL9A3-207ENST00000467819 PSD3Q9NYI0 1048 aa19.32■□□□□ 0.68
COL9A3-207ENST00000467819 PCDHGB3Q9Y5G1 929 aa19.32■□□□□ 0.68
COL9A3-207ENST00000467819 NPFFR2Q9Y5X5 522 aa19.32■□□□□ 0.68
COL9A3-207ENST00000467819 HSPB2A8KAH6 182 aa19.31■□□□□ 0.68
COL9A3-207ENST00000467819 TRAPPC6AO75865 159 aa19.31■□□□□ 0.68
COL9A3-207ENST00000467819 SEMA3DO95025 777 aa19.31■□□□□ 0.68
COL9A3-207ENST00000467819 BMP5P22003 454 aa19.31■□□□□ 0.68
COL9A3-207ENST00000467819 UQCRC1P31930 480 aa19.31■□□□□ 0.68
COL9A3-207ENST00000467819 MASP1P48740 699 aa19.31■□□□□ 0.68
COL9A3-207ENST00000467819 HSPB2Q16082 182 aa19.31■□□□□ 0.68
COL9A3-207ENST00000467819 C6orf163Q5TEZ5 329 aa19.31■□□□□ 0.68
COL9A3-207ENST00000467819 TTC19Q6DKK2 380 aaPredicted RBP19.31■□□□□ 0.68
COL9A3-207ENST00000467819 RELL2Q8NC24 303 aaPredicted RBP19.31■□□□□ 0.68
COL9A3-207ENST00000467819 OR4K14Q8NGD5 310 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms