RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 TUBB1Q9H4B7 451 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 TMEM231Q9H6L2 316 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 NT5DC2Q9H857 520 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 MOB1AQ9H8S9 216 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 SLC25A19Q9HC21 320 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 BCAP29Q9UHQ4 241 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 AFF2P51816 1311 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 FAM205AQ6ZU69 1335 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 NCAPD2Q15021 1401 aa3.61□□□□□ -1.83
CDC42BPA-211ENST00000466538 SYNJ2O15056 1496 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 NPIPA5A0A0B4J1W7 369 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 RNF212BA8MTL3 300 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 NPIPA5E9PKD4 350 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 PDHXO00330 501 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 FRAT2O75474 233 aaPredicted RBP3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 PROS1P07225 676 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 TMOD1P28289 359 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 AKT2P31751 481 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 NPY2RP49146 381 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 GPC3P51654 580 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 TKTL1P51854 596 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 RPS4XP62701 263 aaKnown RBP3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 GABPB1Q06547 395 aaPredicted RBP3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 BTG3Q14201 252 aaPredicted RBP3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 HKDC1Q2TB90 917 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 POM121L1PQ3SYA9 428 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 AGKQ53H12 422 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 DCAF12Q5T6F0 453 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 AGAP7PQ5VUJ5 663 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 IRGCQ6NXR0 463 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 STEAP1BQ6NZ63 245 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 DPY19L2P2Q6ZN68 376 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 MCM10Q7L590 875 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 GET4Q7L5D6 327 aaPredicted RBP3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 CATSPER4Q7RTX7 472 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 KCNMB4Q86W47 210 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 RNF130Q86XS8 419 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 LMNTD2Q8IXW0 634 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 TEX9Q8N6V9 391 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 ZNF781Q8N8C0 355 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 MLKLQ8NB16 471 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 MINDY2Q8NBR6 621 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 CHDHQ8NE62 594 aaPredicted RBP3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 CHPT1Q8WUD6 406 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 TBC1D31Q96DN5 1066 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 CCDC51Q96ER9 411 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 ATF6BQ99941 703 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 PANK3Q9H999 370 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 Q9HAA7 133 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 NGBQ9NPG2 151 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 POLE3Q9NRF9 147 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 SOHLH2Q9NX45 425 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 CLIP2Q9UDT6 1046 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 MIOXQ9UGB7 285 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 PLA2G4CQ9UP65 541 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 SLC6A5Q9Y345 797 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 ZNF175Q9Y473 711 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 AUP1Q9Y679 476 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 CUX2O14529 1486 aa3.6□□□□□ -1.83
CDC42BPA-211ENST00000466538 A0A0A6YYD4 124 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 TRGV8A0A0C4DH27 118 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 A8MXK9 166 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 K7EQG2 157 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 CFLARO15519 480 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 PTMSP20962 102 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 MAT2AP31153 395 aaKnown RBP3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 HSPA1LP34931 641 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 ID1P41134 155 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 NDUFV3P56181 108 aaKnown RBP3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 PEX3P56589 373 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 SLC26A5P58743 744 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 SPP2Q13103 211 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 EMC2Q15006 297 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 ZNF528Q3MIS6 628 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 ACSF3Q4G176 576 aaPredicted RBP3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 UNC5DQ6UXZ4 953 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 TMEM26Q6ZUK4 368 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 NUFIP2Q7Z417 695 aaKnown RBP3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 GOLGA7Q7Z5G4 137 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 RPAINQ86UA6 219 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 SAMD12Q8N8I0 201 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 OR4F5Q8NH21 305 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 SSC4DQ8WTU2 575 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 DEFB118Q96PH6 123 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 CPXM1Q96SM3 734 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 HSD17B14Q9BPX1 270 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 CHCHD5Q9BSY4 110 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 WRAP53Q9BUR4 548 aaKnown RBP3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 LRRC61Q9BV99 259 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 OCR1Q9BZK8 76 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 ECT2Q9H8V3 914 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 CTSZQ9UBR2 303 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 IL20RAQ9UHF4 553 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 MUTYHQ9UIF7 546 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 ZNF490Q9ULM2 529 aaPredicted RBP3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 SPATA2Q9UM82 520 aa3.59□□□□□ -1.83
CDC42BPA-211ENST00000466538 IGHV3OR16-10A0A075B7F0 116 aa3.58□□□□□ -1.84
CDC42BPA-211ENST00000466538 EPM2AB3EWF7 344 aa3.58□□□□□ -1.84
CDC42BPA-211ENST00000466538 E9PMD0 336 aa3.58□□□□□ -1.84
CDC42BPA-211ENST00000466538 SGK494L7N484 410 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms