RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 LRRC25Q8N386 305 aaPredicted RBP17.62■□□□□ 0.41
COL9A3-206ENST00000466532 PTGR2Q8N8N7 351 aaPredicted RBP17.62■□□□□ 0.41
COL9A3-206ENST00000466532 JSRP1Q96MG2 331 aaPredicted RBP17.62■□□□□ 0.41
COL9A3-206ENST00000466532 SERPINI1Q99574 410 aa17.62■□□□□ 0.41
COL9A3-206ENST00000466532 ACSS3Q9H6R3 686 aa17.62■□□□□ 0.41
COL9A3-206ENST00000466532 RYDENQ9NUL5 291 aaKnown RBP17.62■□□□□ 0.41
COL9A3-206ENST00000466532 KCNN3Q9UGI6 736 aa17.62■□□□□ 0.41
COL9A3-206ENST00000466532 CNOT11Q9UKZ1 510 aaKnown RBP17.62■□□□□ 0.41
COL9A3-206ENST00000466532 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.62■□□□□ 0.41
COL9A3-206ENST00000466532 C2orf92A0A1B0GVN3 265 aa17.61■□□□□ 0.41
COL9A3-206ENST00000466532 A0A1W2PS29 197 aa17.61■□□□□ 0.41
COL9A3-206ENST00000466532 OR7A17O14581 309 aa17.61■□□□□ 0.41
COL9A3-206ENST00000466532 PGRMC2O15173 223 aa17.61■□□□□ 0.41
COL9A3-206ENST00000466532 GABRA1P14867 456 aa17.61■□□□□ 0.41
COL9A3-206ENST00000466532 PIK3R1P27986 724 aa17.61■□□□□ 0.41
COL9A3-206ENST00000466532 SSTR4P31391 388 aa17.61■□□□□ 0.41
COL9A3-206ENST00000466532 ADH7P40394 386 aa17.61■□□□□ 0.41
COL9A3-206ENST00000466532 CCNG1P51959 295 aa17.61■□□□□ 0.41
COL9A3-206ENST00000466532 CKAP4Q07065 602 aaKnown RBP17.61■□□□□ 0.41
COL9A3-206ENST00000466532 NTRK2Q16620 822 aa17.61■□□□□ 0.41
COL9A3-206ENST00000466532 UBAP2Q5T6F2 1119 aaKnown RBP17.61■□□□□ 0.41
COL9A3-206ENST00000466532 TMEM200AQ86VY9 491 aa17.61■□□□□ 0.41
COL9A3-206ENST00000466532 LIX1LQ8IVB5 337 aa17.61■□□□□ 0.41
COL9A3-206ENST00000466532 TAGAPQ8N103 731 aa17.61■□□□□ 0.41
COL9A3-206ENST00000466532 OR52B6Q8NGF0 335 aa17.61■□□□□ 0.41
COL9A3-206ENST00000466532 PHF21BQ96EK2 531 aa17.61■□□□□ 0.41
COL9A3-206ENST00000466532 LRRC1Q9BTT6 524 aa17.61■□□□□ 0.41
COL9A3-206ENST00000466532 DOHHQ9BU89 302 aa17.61■□□□□ 0.41
COL9A3-206ENST00000466532 SLC6A15Q9H2J7 730 aa17.61■□□□□ 0.41
COL9A3-206ENST00000466532 ACKR4Q9NPB9 350 aa17.61■□□□□ 0.41
COL9A3-206ENST00000466532 ZNF358Q9NW07 568 aa17.61■□□□□ 0.41
COL9A3-206ENST00000466532 TEX10Q9NXF1 929 aaPredicted RBP17.61■□□□□ 0.41
COL9A3-206ENST00000466532 QPCTLQ9NXS2 382 aa17.61■□□□□ 0.41
COL9A3-206ENST00000466532 NINJ2Q9NZG7 142 aa17.61■□□□□ 0.41
COL9A3-206ENST00000466532 B4GALT7Q9UBV7 327 aa17.61■□□□□ 0.41
COL9A3-206ENST00000466532 SEMA3DO95025 777 aa17.6■□□□□ 0.41
COL9A3-206ENST00000466532 TRPC1P48995 793 aa17.6■□□□□ 0.41
COL9A3-206ENST00000466532 MYBPHQ13203 477 aa17.6■□□□□ 0.41
COL9A3-206ENST00000466532 CES4AQ5XG92 561 aa17.6■□□□□ 0.41
COL9A3-206ENST00000466532 TTC19Q6DKK2 380 aaPredicted RBP17.6■□□□□ 0.41
COL9A3-206ENST00000466532 TMEM64Q6YI46 380 aa17.6■□□□□ 0.41
COL9A3-206ENST00000466532 GALNT12Q8IXK2 581 aa17.6■□□□□ 0.41
COL9A3-206ENST00000466532 LIX1Q8N485 282 aa17.6■□□□□ 0.41
COL9A3-206ENST00000466532 ZNF441Q8N8Z8 693 aa17.6■□□□□ 0.41
COL9A3-206ENST00000466532 NEIL3Q8TAT5 605 aa17.6■□□□□ 0.41
COL9A3-206ENST00000466532 DIO2Q92813 273 aa17.6■□□□□ 0.41
COL9A3-206ENST00000466532 TP53INP1Q96A56 240 aa17.6■□□□□ 0.41
COL9A3-206ENST00000466532 CXorf21Q9HAI6 301 aa17.6■□□□□ 0.41
COL9A3-206ENST00000466532 SLC24A3Q9HC58 644 aa17.6■□□□□ 0.41
COL9A3-206ENST00000466532 KIAA1549Q9HCM3 1950 aa17.6■□□□□ 0.41
COL9A3-206ENST00000466532 CAPN14A8MX76 684 aa17.59■□□□□ 0.41
COL9A3-206ENST00000466532 FAM47E-STBD1D6RA91 191 aa17.59■□□□□ 0.41
COL9A3-206ENST00000466532 TP53I11O14683 189 aa17.59■□□□□ 0.41
COL9A3-206ENST00000466532 RBP1P09455 135 aa17.59■□□□□ 0.41
COL9A3-206ENST00000466532 GDF1P27539 372 aa17.59■□□□□ 0.41
COL9A3-206ENST00000466532 RIPPLY3P57055 190 aa17.59■□□□□ 0.41
COL9A3-206ENST00000466532 RPS6KA2Q15349 733 aa17.59■□□□□ 0.41
COL9A3-206ENST00000466532 SLC25A35Q3KQZ1 300 aa17.59■□□□□ 0.41
COL9A3-206ENST00000466532 TBCELQ5QJ74 424 aa17.59■□□□□ 0.41
COL9A3-206ENST00000466532 HLA-DQA1Q5Y7H0 255 aa17.59■□□□□ 0.41
COL9A3-206ENST00000466532 FRG2Q64ET8 278 aa17.59■□□□□ 0.41
COL9A3-206ENST00000466532 TMEM198Q66K66 360 aa17.59■□□□□ 0.41
COL9A3-206ENST00000466532 SPNS3Q6ZMD2 512 aa17.59■□□□□ 0.41
COL9A3-206ENST00000466532 WDR53Q7Z5U6 358 aaPredicted RBP17.59■□□□□ 0.41
COL9A3-206ENST00000466532 OR4K14Q8NGD5 310 aa17.59■□□□□ 0.41
COL9A3-206ENST00000466532 ZNF597Q96LX8 424 aa17.59■□□□□ 0.41
COL9A3-206ENST00000466532 FRG2BQ96QU4 278 aa17.59■□□□□ 0.41
COL9A3-206ENST00000466532 NTMT1Q9BV86 223 aa17.59■□□□□ 0.41
COL9A3-206ENST00000466532 PCTPQ9UKL6 214 aa17.59■□□□□ 0.41
COL9A3-206ENST00000466532 TMCO1Q9UM00 188 aa17.59■□□□□ 0.41
COL9A3-206ENST00000466532 DOCK7Q96N67 2140 aa17.59■□□□□ 0.41
COL9A3-206ENST00000466532 ANKRD33BA6NCL7 494 aa17.58■□□□□ 0.4
COL9A3-206ENST00000466532 STX16-NPEPL1H3BU86 382 aa17.58■□□□□ 0.4
COL9A3-206ENST00000466532 STX16O14662 325 aa17.58■□□□□ 0.4
COL9A3-206ENST00000466532 TRIM3O75382 744 aaPredicted RBP17.58■□□□□ 0.4
COL9A3-206ENST00000466532 ZWINTO95229 277 aa17.58■□□□□ 0.4
COL9A3-206ENST00000466532 KLK1P06870 262 aa17.58■□□□□ 0.4
COL9A3-206ENST00000466532 INHBAP08476 426 aa17.58■□□□□ 0.4
COL9A3-206ENST00000466532 CT62P0C5K7 136 aa17.58■□□□□ 0.4
COL9A3-206ENST00000466532 FBXW4P57775 412 aa17.58■□□□□ 0.4
COL9A3-206ENST00000466532 IFT88Q13099 833 aa17.58■□□□□ 0.4
COL9A3-206ENST00000466532 TRAF3Q13114 568 aa17.58■□□□□ 0.4
COL9A3-206ENST00000466532 RIPPLY2Q5TAB7 128 aa17.58■□□□□ 0.4
COL9A3-206ENST00000466532 C6orf163Q5TEZ5 329 aa17.58■□□□□ 0.4
COL9A3-206ENST00000466532 ULK2Q8IYT8 1036 aa17.58■□□□□ 0.4
COL9A3-206ENST00000466532 MYRIPQ8NFW9 859 aa17.58■□□□□ 0.4
COL9A3-206ENST00000466532 NSUN5Q96P11 429 aaKnown RBP17.58■□□□□ 0.4
COL9A3-206ENST00000466532 MRPL1Q9BYD6 325 aaKnown RBP17.58■□□□□ 0.4
COL9A3-206ENST00000466532 OR10A5Q9H207 317 aa17.58■□□□□ 0.4
COL9A3-206ENST00000466532 ZBTB26Q9HCK0 441 aa17.58■□□□□ 0.4
COL9A3-206ENST00000466532 AHSPQ9NZD4 102 aa17.58■□□□□ 0.4
COL9A3-206ENST00000466532 XPR1Q9UBH6 696 aa17.58■□□□□ 0.4
COL9A3-206ENST00000466532 MTRF1LQ9UGC7 380 aaKnown RBP17.58■□□□□ 0.4
COL9A3-206ENST00000466532 PCDHGB3Q9Y5G1 929 aa17.58■□□□□ 0.4
COL9A3-206ENST00000466532 NPFFR2Q9Y5X5 522 aa17.58■□□□□ 0.4
COL9A3-206ENST00000466532 C15orf38-AP3S2A0A0A6YYH1 394 aa17.57■□□□□ 0.4
COL9A3-206ENST00000466532 SMIM24O75264 130 aa17.57■□□□□ 0.4
COL9A3-206ENST00000466532 ACSL3O95573 720 aa17.57■□□□□ 0.4
COL9A3-206ENST00000466532 NT5EP21589 574 aa17.57■□□□□ 0.4
COL9A3-206ENST00000466532 MAGEA12P43365 314 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms