RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 FKBP14Q9NWM8 211 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 CMTM6Q9NX76 183 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 CCDC59Q9P031 241 aaKnown RBP3.28□□□□□ -1.88
SORT1-202ENST00000466471 KCNN3Q9UGI6 736 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 DAPK2Q9UIK4 370 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 N6AMT1Q9Y5N5 214 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 SESN1Q9Y6P5 492 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 AP1M2Q9Y6Q5 423 aa3.28□□□□□ -1.88
SORT1-202ENST00000466471 HELZP42694 1942 aaKnown RBP3.27□□□□□ -1.89
SORT1-202ENST00000466471 ZNF469Q96JG9 3925 aaPredicted RBP3.27□□□□□ -1.89
SORT1-202ENST00000466471 CUBNO60494 3623 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 RNF103-CHMP3A0A140T963 221 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 C17orf113A0A1B0GUU1 675 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 TCRBV21S2A2A0A5A6 115 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 WDR27A2RRH5 827 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 FAM25AB3EWG3 89 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 FAM25CB3EWG5 89 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 FAM25GB3EWG6 89 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 LOC110117498-PIK3R3F6TDL0 507 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 PSMD9O00233 223 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 NME4O00746 187 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 EI24O14681 340 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 MRASO14807 208 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 FFAR3O14843 346 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 UBDO15205 165 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 OGTO15294 1046 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 GPR42O15529 346 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 RRP8O43159 456 aaKnown RBP3.27□□□□□ -1.89
SORT1-202ENST00000466471 SLC7A4O43246 635 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 SUV39H1O43463 412 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 SYNCRIPO60506 623 aaKnown RBP3.27□□□□□ -1.89
SORT1-202ENST00000466471 PAGE4O60829 102 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 ERN1O75460 977 aaKnown RBP3.27□□□□□ -1.89
SORT1-202ENST00000466471 GMNNO75496 209 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 EEDO75530 441 aaKnown RBP3.27□□□□□ -1.89
SORT1-202ENST00000466471 CDK14O94921 469 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 SEMA3DO95025 777 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 KCNK2O95069 426 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 OR2C1O95371 312 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 ONECUT2O95948 504 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 GOT2P00505 430 aaKnown RBP3.27□□□□□ -1.89
SORT1-202ENST00000466471 CALCAP01258 141 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 PLA2G1BP04054 148 aaKnown RBP3.27□□□□□ -1.89
SORT1-202ENST00000466471 ALPPP05187 535 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 KRT19P08727 400 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 RBP1P09455 135 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 SLC35E2BP0CK96 405 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 THRBP10828 461 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 CDH1P12830 882 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 NCF1P14598 390 aaPredicted RBP3.27□□□□□ -1.89
SORT1-202ENST00000466471 ITGA2P17301 1181 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 CTRB1P17538 263 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 CD9P21926 228 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 CYP2F1P24903 491 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 CSTF2P33240 577 aaKnown RBP eCLIP3.27□□□□□ -1.89
SORT1-202ENST00000466471 S100A5P33763 92 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 MSX2P35548 267 aaPredicted RBP3.27□□□□□ -1.89
SORT1-202ENST00000466471 HNF1BP35680 557 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 GRIA1P42261 906 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 MAGEA2P43356 314 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 GNPDA1P46926 289 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 ZFP36L2P47974 494 aaKnown RBP3.27□□□□□ -1.89
SORT1-202ENST00000466471 LIG4P49917 911 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 BLKP51451 505 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 CLCN4P51793 760 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 SLC7A2P52569 658 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 NAGLUP54802 743 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 TPTEP56180 551 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 FOXL2P58012 376 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 CXADRP78310 365 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 EFNB1P98172 346 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 EMX1Q04741 257 aaPredicted RBP3.27□□□□□ -1.89
SORT1-202ENST00000466471 PLP2Q04941 152 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 ARHGAP1Q07960 439 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 MGAT3Q09327 533 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 LMAN2Q12907 356 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 CSTF3Q12996 717 aaKnown RBP3.27□□□□□ -1.89
SORT1-202ENST00000466471 TNK1Q13470 666 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 GPR50Q13585 617 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 PEX6Q13608 980 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 DNASE1L3Q13609 305 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 RCAN2Q14206 197 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 FASTKQ14296 549 aaKnown RBP3.27□□□□□ -1.89
SORT1-202ENST00000466471 NPTX1Q15818 432 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 UGCGQ16739 394 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 KYAT1Q16773 422 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 GEN1Q17RS7 908 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 RNF151Q2KHN1 245 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 ADPRMQ3LIE5 342 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 C5orf22Q49AR2 442 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 XKR9Q5GH70 373 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 KCNT1Q5JUK3 1230 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 FAM102AQ5T9C2 384 aaPredicted RBP3.27□□□□□ -1.89
SORT1-202ENST00000466471 METRNLQ641Q3 311 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 TMEM198Q66K66 360 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 NCBP2-AS2Q69YL0 99 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 SP5Q6BEB4 398 aaPredicted RBP3.27□□□□□ -1.89
SORT1-202ENST00000466471 CTRB2Q6GPI1 263 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 ZNF544Q6NX49 715 aa3.27□□□□□ -1.89
SORT1-202ENST00000466471 SLC22A25Q6T423 547 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms