RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 ERV3-1Q14264 604 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 TSNQ15631 228 aaKnown RBP3.43□□□□□ -1.86
SCFD1-204ENST00000463622 PPP1R3AQ16821 1122 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 PRR30Q53SZ7 412 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-204ENST00000463622 TECRLQ5HYJ1 363 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 LDLRAP1Q5SW96 308 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 AGBL2Q5U5Z8 902 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 ARMC3Q5W041 872 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 ZDHHC20Q5W0Z9 365 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 TTC19Q6DKK2 380 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-204ENST00000463622 PTRHD1Q6GMV3 140 aaKnown RBP3.43□□□□□ -1.86
SCFD1-204ENST00000463622 LRRC8EQ6NSJ5 796 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 FAM45BPQ6NSW5 357 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 JMJD6Q6NYC1 403 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-204ENST00000463622 SLC30A9Q6PML9 568 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 WDR74Q6RFH5 385 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-204ENST00000463622 SBSNQ6UWP8 590 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 CEACAM20Q6UY09 585 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 SPNS3Q6ZMD2 512 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 CERS6Q6ZMG9 384 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 SDCCAG8Q86SQ7 713 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-204ENST00000463622 ISCA2Q86U28 154 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 CFAP206Q8IYR0 622 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 ZBTB2Q8N680 514 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 ANKRD42Q8N9B4 389 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 FAM45AQ8TCE6 357 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 MGARPQ8TDB4 240 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 TCP10LQ8TDR4 215 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 KCNJ9Q92806 393 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 EXT2Q93063 718 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 ULK4Q96C45 1275 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 UBXN10Q96LJ8 280 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 LINC00615Q96LM1 132 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-204ENST00000463622 FAM111AQ96PZ2 611 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 OR2M4Q96R27 311 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 ATOH8Q96SQ7 321 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 CTRCQ99895 268 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 ROPN1BQ9BZX4 212 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-204ENST00000463622 C20orf27Q9GZN8 174 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 WWP1Q9H0M0 922 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 OR52A5Q9H2C5 316 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 ROPN1Q9HAT0 212 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-204ENST00000463622 PHPT1Q9NRX4 125 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-204ENST00000463622 TMEM9Q9P0T7 183 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 CPSF2Q9P2I0 782 aaKnown RBP3.43□□□□□ -1.86
SCFD1-204ENST00000463622 ZNF624Q9P2J8 865 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-204ENST00000463622 GNPTGQ9UJJ9 305 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 MRPS18BQ9Y676 258 aaKnown RBP3.43□□□□□ -1.86
SCFD1-204ENST00000463622 SPG11Q96JI7 2443 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 NIPBLQ6KC79 2804 aaeCLIP3.43□□□□□ -1.86
SCFD1-204ENST00000463622 SDK2Q58EX2 2172 aa3.43□□□□□ -1.86
SCFD1-204ENST00000463622 TP53BP1Q12888 1972 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-204ENST00000463622 IQANK1A0A1B0GTG1 560 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 MGAT4DA6NG13 374 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 UBXN8O00124 270 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 CACNB4O00305 520 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-204ENST00000463622 TAPBPO15533 448 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 VEGFDO43915 354 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 PLIN3O60664 434 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 SNX2O60749 519 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 SLCO2B1O94956 709 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 AP2A2O94973 939 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 SIX3O95343 332 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-204ENST00000463622 MT-ND3P03897 115 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 MYZAPP0CAP1 466 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 DHRS4L1P0CG22 281 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 STMN1P16949 149 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 TSPAN8P19075 237 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 TFEBP19484 476 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 ITGA3P26006 1051 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 PRKAR1BP31321 381 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 UQCRC1P31930 480 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 SERPINB9P50453 376 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 CLCNKAP51800 687 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 PGDP52209 483 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 PPP1CAP62136 330 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 ABRQ12979 859 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 FASTKQ14296 549 aaKnown RBP3.42□□□□□ -1.86
SCFD1-204ENST00000463622 PCLAFQ15004 111 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 CNN3Q15417 329 aaKnown RBP3.42□□□□□ -1.86
SCFD1-204ENST00000463622 INSCQ1MX18 579 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 ZCCHC23Q6ZST2 131 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 RAPH1Q70E73 1250 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 LRRTM4Q86VH4 590 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 HPS6Q86YV9 775 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 GALNT13Q8IUC8 556 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 MCEMP1Q8IX19 187 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 LMNTD2Q8IXW0 634 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 NAGSQ8N159 534 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 RIBC1Q8N443 379 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-204ENST00000463622 C2orf73Q8N5S3 287 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-204ENST00000463622 NANOGP1Q8N7R0 232 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 RBMXL3Q8N7X1 1067 aaKnown RBP3.42□□□□□ -1.86
SCFD1-204ENST00000463622 PPFIBP2Q8ND30 876 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 OR5AR1Q8NGP9 310 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 OR2L2Q8NH16 312 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 PRSS3P2Q8NHM4 247 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 CFAP61Q8NHU2 1237 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 ADAMTS18Q8TE60 1221 aa3.42□□□□□ -1.86
SCFD1-204ENST00000463622 THAP4Q8WY91 577 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms