RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 DOCK10Q96BY6 2186 aa18.42■□□□□ 0.54
COL9A3-204ENST00000463487 SCAMP2O15127 329 aaKnown RBP18.42■□□□□ 0.54
COL9A3-204ENST00000463487 BCAS2O75934 225 aaPredicted RBP18.42■□□□□ 0.54
COL9A3-204ENST00000463487 G6PDP11413 515 aa18.42■□□□□ 0.54
COL9A3-204ENST00000463487 EPHA3P29320 983 aa18.42■□□□□ 0.54
COL9A3-204ENST00000463487 GPR143P51810 404 aa18.42■□□□□ 0.54
COL9A3-204ENST00000463487 NCBP2P52298 156 aaKnown RBP eCLIP18.42■□□□□ 0.545e-8■■■□□ 15.2
COL9A3-204ENST00000463487 ARG2P78540 354 aa18.42■□□□□ 0.54
COL9A3-204ENST00000463487 MAP4K2Q12851 820 aa18.42■□□□□ 0.54
COL9A3-204ENST00000463487 CEBPEQ15744 281 aa18.42■□□□□ 0.54
COL9A3-204ENST00000463487 ZNF750Q32MQ0 723 aa18.42■□□□□ 0.54
COL9A3-204ENST00000463487 IGFL2Q6UWQ7 119 aa18.42■□□□□ 0.54
COL9A3-204ENST00000463487 LARP4Q71RC2 724 aaKnown RBP eCLIP18.42■□□□□ 0.54
COL9A3-204ENST00000463487 CEP70Q8NHQ1 597 aa18.42■□□□□ 0.54
COL9A3-204ENST00000463487 SUN3Q8TAQ9 357 aa18.42■□□□□ 0.54
COL9A3-204ENST00000463487 ACTRT2Q8TDY3 377 aa18.42■□□□□ 0.54
COL9A3-204ENST00000463487 ZBED6CLQ96FA7 236 aaPredicted RBP18.42■□□□□ 0.54
COL9A3-204ENST00000463487 MAELQ96JY0 434 aaKnown RBP18.42■□□□□ 0.54
COL9A3-204ENST00000463487 SIKE1Q9BRV8 207 aa18.42■□□□□ 0.54
COL9A3-204ENST00000463487 RNF32Q9H0A6 362 aa18.42■□□□□ 0.54
COL9A3-204ENST00000463487 CDCP1Q9H5V8 836 aa18.42■□□□□ 0.54
COL9A3-204ENST00000463487 CROCCQ5TZA2 2017 aa18.41■□□□□ 0.54
COL9A3-204ENST00000463487 GOLGA8QA0A0J9YX86 632 aa18.41■□□□□ 0.54
COL9A3-204ENST00000463487 GOLGA8OA6NCC3 632 aa18.41■□□□□ 0.54
COL9A3-204ENST00000463487 TCP11X1B4DZS4 312 aa18.41■□□□□ 0.54
COL9A3-204ENST00000463487 GOLGA8NF8WBI6 632 aa18.41■□□□□ 0.54
COL9A3-204ENST00000463487 POLR3GO15318 223 aaPredicted RBP18.41■□□□□ 0.54
COL9A3-204ENST00000463487 IGKV3-11P04433 115 aa18.41■□□□□ 0.54
COL9A3-204ENST00000463487 CLDN8P56748 225 aa18.41■□□□□ 0.54
COL9A3-204ENST00000463487 RNF4P78317 190 aa18.41■□□□□ 0.54
COL9A3-204ENST00000463487 KLRB1Q12918 225 aa18.41■□□□□ 0.54
COL9A3-204ENST00000463487 PDE7AQ13946 482 aa18.41■□□□□ 0.54
COL9A3-204ENST00000463487 PTGR1Q14914 329 aa18.41■□□□□ 0.54
COL9A3-204ENST00000463487 RPS6KA2Q15349 733 aa18.41■□□□□ 0.54
COL9A3-204ENST00000463487 PRICKLE4Q2TBC4 344 aa18.41■□□□□ 0.54
COL9A3-204ENST00000463487 HLA-DQA1Q5Y7H0 255 aa18.41■□□□□ 0.54
COL9A3-204ENST00000463487 B3GNTL1Q67FW5 361 aaPredicted RBP18.41■□□□□ 0.54
COL9A3-204ENST00000463487 HORMAD2Q8N7B1 307 aa18.41■□□□□ 0.54
COL9A3-204ENST00000463487 ZNF675Q8TD23 568 aa18.41■□□□□ 0.54
COL9A3-204ENST00000463487 DPY30Q9C005 99 aa18.41■□□□□ 0.54
COL9A3-204ENST00000463487 WDR55Q9H6Y2 383 aaPredicted RBP18.41■□□□□ 0.54
COL9A3-204ENST00000463487 ATP6V1HQ9UI12 483 aa18.41■□□□□ 0.54
COL9A3-204ENST00000463487 FAM208BQ5VWN6 2430 aa18.4■□□□□ 0.54
COL9A3-204ENST00000463487 A0A1W2PS29 197 aa18.4■□□□□ 0.54
COL9A3-204ENST00000463487 MYO1GB0I1T2 1018 aa18.4■□□□□ 0.54
COL9A3-204ENST00000463487 PRAMEF2O60811 474 aa18.4■□□□□ 0.54
COL9A3-204ENST00000463487 IDO1P14902 403 aa18.4■□□□□ 0.54
COL9A3-204ENST00000463487 CLNS1AP54105 237 aaKnown RBP18.4■□□□□ 0.54
COL9A3-204ENST00000463487 MLF1P58340 268 aa18.4■□□□□ 0.54
COL9A3-204ENST00000463487 C21orf58P58505 322 aa18.4■□□□□ 0.54
COL9A3-204ENST00000463487 FUT7Q11130 342 aa18.4■□□□□ 0.54
COL9A3-204ENST00000463487 NFATC3Q12968 1075 aa18.4■□□□□ 0.54
COL9A3-204ENST00000463487 DPY19L1Q2PZI1 675 aa18.4■□□□□ 0.54
COL9A3-204ENST00000463487 CPTPQ5TA50 214 aa18.4■□□□□ 0.54
COL9A3-204ENST00000463487 FCRLBQ6BAA4 426 aa18.4■□□□□ 0.54
COL9A3-204ENST00000463487 FAM180BQ6P0A1 224 aa18.4■□□□□ 0.54
COL9A3-204ENST00000463487 EPGNQ6UW88 154 aa18.4■□□□□ 0.54
COL9A3-204ENST00000463487 DGAT2L6Q6ZPD8 337 aa18.4■□□□□ 0.54
COL9A3-204ENST00000463487 BEST3Q8N1M1 668 aa18.4■□□□□ 0.54
COL9A3-204ENST00000463487 ARMC10Q8N2F6 343 aa18.4■□□□□ 0.54
COL9A3-204ENST00000463487 NUBPLQ8TB37 319 aa18.4■□□□□ 0.54
COL9A3-204ENST00000463487 THAP3Q8WTV1 239 aaPredicted RBP18.4■□□□□ 0.54
COL9A3-204ENST00000463487 HAS2Q92819 552 aa18.4■□□□□ 0.54
COL9A3-204ENST00000463487 UTP23Q9BRU9 249 aaKnown RBP18.4■□□□□ 0.54
COL9A3-204ENST00000463487 MAT2BQ9NZL9 334 aa18.4■□□□□ 0.54
COL9A3-204ENST00000463487 BCAP29Q9UHQ4 241 aa18.4■□□□□ 0.54
COL9A3-204ENST00000463487 ANAPC2Q9UJX6 822 aa18.4■□□□□ 0.54
COL9A3-204ENST00000463487 EXO1Q9UQ84 846 aaKnown RBP18.4■□□□□ 0.54
COL9A3-204ENST00000463487 YARS2Q9Y2Z4 477 aaKnown RBP18.4■□□□□ 0.54
COL9A3-204ENST00000463487 HEMK1Q9Y5R4 338 aaPredicted RBP18.4■□□□□ 0.54
COL9A3-204ENST00000463487 GABRR3A8MPY1 467 aa18.39■□□□□ 0.53
COL9A3-204ENST00000463487 K7EM74 188 aa18.39■□□□□ 0.53
COL9A3-204ENST00000463487 EDF1O60869 148 aaKnown RBP18.39■□□□□ 0.53
COL9A3-204ENST00000463487 PDGFAP04085 211 aa18.39■□□□□ 0.53
COL9A3-204ENST00000463487 TROVE2P10155 538 aaKnown RBP eCLIP18.39■□□□□ 0.53
COL9A3-204ENST00000463487 GPC1P35052 558 aa18.39■□□□□ 0.53
COL9A3-204ENST00000463487 DIO3P55073 304 aa18.39■□□□□ 0.53
COL9A3-204ENST00000463487 SLC37A1P57057 533 aa18.39■□□□□ 0.53
COL9A3-204ENST00000463487 OC90Q02509 493 aaPredicted RBP18.39■□□□□ 0.53
COL9A3-204ENST00000463487 TLR1Q15399 786 aa18.39■□□□□ 0.53
COL9A3-204ENST00000463487 GSTA3Q16772 222 aa18.39■□□□□ 0.53
COL9A3-204ENST00000463487 TMEM156Q8N614 296 aa18.39■□□□□ 0.53
COL9A3-204ENST00000463487 ADCY4Q8NFM4 1077 aa18.39■□□□□ 0.53
COL9A3-204ENST00000463487 OR9A2Q8NGT5 310 aa18.39■□□□□ 0.53
COL9A3-204ENST00000463487 SLC22A8Q8TCC7 542 aa18.39■□□□□ 0.53
COL9A3-204ENST00000463487 AMDHD1Q96NU7 426 aa18.39■□□□□ 0.53
COL9A3-204ENST00000463487 GAL3ST4Q96RP7 486 aa18.39■□□□□ 0.53
COL9A3-204ENST00000463487 ZBTB18Q99592 522 aa18.39■□□□□ 0.53
COL9A3-204ENST00000463487 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.39■□□□□ 0.533e-21■■■□□ 15.2
COL9A3-204ENST00000463487 OR10A5Q9H207 317 aa18.39■□□□□ 0.53
COL9A3-204ENST00000463487 TCF7L2Q9NQB0 619 aa18.39■□□□□ 0.53
COL9A3-204ENST00000463487 ACSS1Q9NUB1 689 aaPredicted RBP18.39■□□□□ 0.53
COL9A3-204ENST00000463487 MYOTQ9UBF9 498 aa18.39■□□□□ 0.53
COL9A3-204ENST00000463487 PRODH2Q9UF12 536 aa18.39■□□□□ 0.53
COL9A3-204ENST00000463487 ZNF223Q9UK11 482 aaPredicted RBP18.39■□□□□ 0.53
COL9A3-204ENST00000463487 B3GNT3Q9Y2A9 372 aa18.39■□□□□ 0.53
COL9A3-204ENST00000463487 OR5H15A6NDH6 313 aa18.38■□□□□ 0.53
COL9A3-204ENST00000463487 COQ9O75208 318 aa18.38■□□□□ 0.53
COL9A3-204ENST00000463487 ITGA10O75578 1167 aa18.38■□□□□ 0.53
COL9A3-204ENST00000463487 VIMP08670 466 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms