RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 C11orf24Q96F05 449 aaPredicted RBP12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 PPP3R2Q96LZ3 170 aa12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 TAAR6Q96RI8 345 aa12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 SH3GL2Q99962 352 aa12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 OR8D2Q9GZM6 311 aa12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 TUBB1Q9H4B7 451 aa12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 CDCP1Q9H5V8 836 aa12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 GIMAP4Q9NUV9 329 aa12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.32□□□□□ -0.44
RAB11FIP3-207ENST00000461009 TRBV11-1A0A0K0K1C0 115 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 GABRR3A8MPY1 467 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 PIP5K1BO14986 540 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 ITM2AO43736 263 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 LYPLA1O75608 230 aaPredicted RBP12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 ERAL1O75616 437 aaKnown RBP12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 UNC5CO95185 931 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 IL3P08700 152 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 CSNK2A2P19784 350 aaPredicted RBP12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 MAPK1P28482 360 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 CD96P40200 585 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 CYB561P49447 251 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 GPR143P51810 404 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 C2orf80Q0P641 193 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 ATP6AP1LQ52LC2 224 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 KRTCAP3Q53RY4 240 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 FAM219BQ5XKK7 198 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 HSDL2Q6YN16 418 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 Q6ZSR9 355 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 FJX1Q86VR8 437 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 APCDD1LQ8NCL9 501 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 SLC2A12Q8TD20 617 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 RIT1Q92963 219 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 TMEM125Q96AQ2 219 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 PPWD1Q96BP3 646 aaKnown RBP12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 KLHL29Q96CT2 875 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 SENP5Q96HI0 755 aaPredicted RBP12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 EBPLQ9BY08 206 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 MANSC1Q9H8J5 431 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 THAP1Q9NVV9 213 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 EHD3Q9NZN3 535 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 LRFN1Q9P244 771 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 UTS2RQ9UKP6 389 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 CES1P1Q9UKY3 287 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 CCL27Q9Y4X3 112 aa12.31□□□□□ -0.44
RAB11FIP3-207ENST00000461009 CPAMD8Q8IZJ3 1885 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 TRGV8A0A0C4DH27 118 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 WASHC1A8K0Z3 465 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 TMEM233B4DJY2 109 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 LSM1O15116 133 aaKnown RBP12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 SKAP2O75563 359 aaPredicted RBP12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 RNF224P0DH78 156 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 CPMP14384 443 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 ARRB2P32121 409 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 TDGF1P3P51864 188 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 KCNK10P57789 538 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 ALDH6A1Q02252 535 aaKnown RBP12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 BST1Q10588 318 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 KIAA0040Q15053 153 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 SPRED3Q2MJR0 410 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 GALNTL6Q49A17 601 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 SPINK14Q6IE38 97 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 IKBIPQ70UQ0 350 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 SLC34A3Q8N130 599 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 KIF2BQ8N4N8 673 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 ZNF781Q8N8C0 355 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 OR8K3Q8NH51 312 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 CDC26Q8NHZ8 85 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 UCN3Q969E3 161 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 RELTQ969Z4 430 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 RUBCNLQ9H714 662 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 MYNNQ9NPC7 610 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 MIEF1Q9NQG6 463 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 KLHL1Q9NR64 748 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 ANKRD10Q9NXR5 420 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 HAO1Q9UJM8 370 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 POLR3HQ9Y535 204 aaPredicted RBP12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 PTGDR2Q9Y5Y4 395 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 USP9YO00507 2555 aaPredicted RBP12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 ICE1Q9Y2F5 2266 aa12.3□□□□□ -0.44
RAB11FIP3-207ENST00000461009 USP9XQ93008 2570 aaPredicted RBP12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 CLDN1O95832 211 aa12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 SP1P08047 785 aa12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 DDX5P17844 614 aaKnown RBP12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 DDCP20711 480 aa12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 NT5EP21589 574 aa12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 MPIP34949 423 aa12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 ASMTP46597 345 aa12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 MLF1P58340 268 aa12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 MAD2L1Q13257 205 aaPredicted RBP12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 ZNF267Q14586 743 aaPredicted RBP12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 MAPKAPK3Q16644 382 aa12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 TTMPQ5BVD1 217 aa12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 C1QL3Q5VWW1 255 aa12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 CES4AQ5XG92 561 aa12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 FAM71E1Q6IPT2 247 aa12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 SLC25A25Q6KCM7 469 aa12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 MDS2Q8NDY4 140 aa12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 OR2T11Q8NH01 316 aa12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 ZNF721Q8TF20 911 aa12.29□□□□□ -0.44
RAB11FIP3-207ENST00000461009 DYDC1Q8WWB3 177 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms