RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 PLOD2O00469 737 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 KLKB1P03952 638 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 TIMP2P16035 220 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 ARNTP27540 789 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.06□□□□□ -0.16
PTPRU-205ENST00000460170 GKN2Q86XP6 184 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 GALNT12Q8IXK2 581 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 PELI3Q8N2H9 469 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 SHKBP1Q8TBC3 707 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 PRTFDC1Q9NRG1 225 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 ZNF224Q9NZL3 707 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 OR5K4A6NMS3 321 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 KCNJ13O60928 360 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 HTR1AP08908 422 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 S100GP29377 79 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 HLA-FP30511 346 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 OTUD1Q5VV17 481 aaPredicted RBP14.06□□□□□ -0.16
PTPRU-205ENST00000460170 Q6ZSR9 355 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 ZNF627Q7L945 461 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 SDR16C5Q8N3Y7 309 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 SAMD12Q8N8I0 201 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 PLA2G15Q8NCC3 412 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 LMX1AQ8TE12 382 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 SLC17A9Q9BYT1 436 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 CWH43Q9H720 699 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 GMPR2Q9P2T1 348 aaKnown RBP14.06□□□□□ -0.16
PTPRU-205ENST00000460170 GRHPRQ9UBQ7 328 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 ZFR2Q9UPR6 939 aaKnown RBP14.06□□□□□ -0.16
PTPRU-205ENST00000460170 SLC19A2O60779 497 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 ITGB7P26010 798 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 MAD2L1BPQ15013 274 aaPredicted RBP14.06□□□□□ -0.16
PTPRU-205ENST00000460170 PTPRRQ15256 657 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 GFOD2Q3B7J2 385 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 LCTLQ6UWM7 567 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 ACBD7Q8N6N7 88 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 GATAD2BQ8WXI9 593 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 JSRP1Q96MG2 331 aaPredicted RBP14.06□□□□□ -0.16
PTPRU-205ENST00000460170 ZNF334Q9HCZ1 680 aaPredicted RBP14.06□□□□□ -0.16
PTPRU-205ENST00000460170 DKK3Q9UBP4 350 aa14.06□□□□□ -0.16
PTPRU-205ENST00000460170 KHNYNO15037 678 aaKnown RBP14.05□□□□□ -0.16
PTPRU-205ENST00000460170 PORP16435 677 aaPredicted RBP14.05□□□□□ -0.16
PTPRU-205ENST00000460170 MTNR1AP48039 350 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 DEFB103AP81534 67 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 HNRNPA1L2Q32P51 320 aaKnown RBP14.05□□□□□ -0.16
PTPRU-205ENST00000460170 CCBE1Q6UXH8 406 aaPredicted RBP14.05□□□□□ -0.16
PTPRU-205ENST00000460170 DTD2Q96FN9 168 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 TTTY10Q9BZA0 68 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 PRODH2Q9UF12 536 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 TBC1D24Q9ULP9 559 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 AP1M2Q9Y6Q5 423 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 CSTAP01040 98 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 GP1BBP13224 206 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 DDCP20711 480 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 MAPK3P27361 379 aaPredicted RBP14.05□□□□□ -0.16
PTPRU-205ENST00000460170 RPS26P11Q5JNZ5 115 aaPredicted RBP14.05□□□□□ -0.16
PTPRU-205ENST00000460170 ARHGAP40Q5TG30 622 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 HCAR2Q8TDS4 363 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 HAVCR1Q96D42 359 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 MMABQ96EY8 250 aaPredicted RBP14.05□□□□□ -0.16
PTPRU-205ENST00000460170 B3GNT4Q9C0J1 378 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 ENPP5Q9UJA9 477 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 BOLA2-SMG1P6H3BVE0 249 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 OR7A17O14581 309 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 TIMP1P01033 207 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 EPCAMP16422 314 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 MLIPQ5VWP3 458 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 CBLL1Q75N03 491 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 PARS2Q7L3T8 475 aaKnown RBP14.05□□□□□ -0.16
PTPRU-205ENST00000460170 FUNDC1Q8IVP5 155 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 OR8H3Q8N146 312 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 CHDHQ8NE62 594 aaPredicted RBP14.05□□□□□ -0.16
PTPRU-205ENST00000460170 COQ8BQ96D53 544 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 FUZQ9BT04 418 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 G6PC3Q9BUM1 346 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 WDR37Q9Y2I8 494 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 INMT-MINDY4F8WBC2 141 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 PSMD9O00233 223 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 LATO43561 262 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 AHSA1O95433 338 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 AK1P00568 194 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 CRHBPP24387 322 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 OPRL1P41146 370 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 ACTC1P68032 377 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 ACTA1P68133 377 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 OR4N5Q8IXE1 308 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 GPALPP1Q8IXQ4 340 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 OR2T11Q8NH01 316 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 OR56A3Q8NH54 315 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 ZNF480Q8WV37 535 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 FOXJ1Q92949 421 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 HS6ST2Q96MM7 605 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 GPR78Q96P69 363 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 NELL2Q99435 816 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 FZD3Q9NPG1 666 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 CCDC85CA6NKD9 419 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 JRKO75564 520 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 SOX30O94993 753 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 ZNF26P17031 533 aaPredicted RBP14.05□□□□□ -0.16
PTPRU-205ENST00000460170 GPR4P46093 362 aa14.05□□□□□ -0.16
PTPRU-205ENST00000460170 SIM1P81133 766 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms