RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 TBCELQ5QJ74 424 aa20.97■□□□□ 0.95
PTPN4-207ENST00000460162 PRAMEF20Q5VT98 475 aa20.97■□□□□ 0.95
PTPN4-207ENST00000460162 TTC19Q6DKK2 380 aaPredicted RBP20.97■□□□□ 0.95
PTPN4-207ENST00000460162 ZNF585AQ6P3V2 769 aa20.97■□□□□ 0.95
PTPN4-207ENST00000460162 B3GNT6Q6ZMB0 384 aa20.97■□□□□ 0.95
PTPN4-207ENST00000460162 PAGE2Q7Z2X7 111 aa20.97■□□□□ 0.95
PTPN4-207ENST00000460162 GALNT12Q8IXK2 581 aa20.97■□□□□ 0.95
PTPN4-207ENST00000460162 TAGAPQ8N103 731 aa20.97■□□□□ 0.95
PTPN4-207ENST00000460162 LRRC25Q8N386 305 aaPredicted RBP20.97■□□□□ 0.95
PTPN4-207ENST00000460162 OR10G3Q8NGC4 313 aa20.97■□□□□ 0.95
PTPN4-207ENST00000460162 CXorf21Q9HAI6 301 aa20.97■□□□□ 0.95
PTPN4-207ENST00000460162 MCCC2Q9HCC0 563 aa20.97■□□□□ 0.95
PTPN4-207ENST00000460162 ZBTB26Q9HCK0 441 aa20.97■□□□□ 0.95
PTPN4-207ENST00000460162 ZFP64Q9NPA5 681 aa20.97■□□□□ 0.95
PTPN4-207ENST00000460162 KCNJ16Q9NPI9 418 aa20.97■□□□□ 0.95
PTPN4-207ENST00000460162 NPDC1Q9NQX5 325 aaPredicted RBP20.97■□□□□ 0.95
PTPN4-207ENST00000460162 QPCTLQ9NXS2 382 aa20.97■□□□□ 0.95
PTPN4-207ENST00000460162 AHSPQ9NZD4 102 aa20.97■□□□□ 0.95
PTPN4-207ENST00000460162 DMGDHQ9UI17 866 aaKnown RBP20.97■□□□□ 0.95
PTPN4-207ENST00000460162 FAM215AQ9Y5M1 114 aa20.97■□□□□ 0.95
PTPN4-207ENST00000460162 NCKAP5O14513 1909 aa20.97■□□□□ 0.95
PTPN4-207ENST00000460162 INTS1Q8N201 2190 aaKnown RBP20.97■□□□□ 0.95
PTPN4-207ENST00000460162 TRGV5A0A0B4J1U4 118 aa20.96■□□□□ 0.95
PTPN4-207ENST00000460162 NKX2-6A6NCS4 301 aa20.96■□□□□ 0.95
PTPN4-207ENST00000460162 LRRC3CA6NJW4 275 aa20.96■□□□□ 0.95
PTPN4-207ENST00000460162 WASHC1A8K0Z3 465 aa20.96■□□□□ 0.95
PTPN4-207ENST00000460162 MSX1P28360 303 aa20.96■□□□□ 0.95
PTPN4-207ENST00000460162 TLE4Q04727 773 aa20.96■□□□□ 0.95
PTPN4-207ENST00000460162 RPS6KA2Q15349 733 aa20.96■□□□□ 0.95
PTPN4-207ENST00000460162 WLSQ5T9L3 541 aa20.96■□□□□ 0.95
PTPN4-207ENST00000460162 CCDC71Q8IV32 467 aaPredicted RBP20.96■□□□□ 0.95
PTPN4-207ENST00000460162 ZNF441Q8N8Z8 693 aa20.96■□□□□ 0.95
PTPN4-207ENST00000460162 DOK4Q8TEW6 326 aa20.96■□□□□ 0.95
PTPN4-207ENST00000460162 TP53INP1Q96A56 240 aa20.96■□□□□ 0.95
PTPN4-207ENST00000460162 NSUN5Q96P11 429 aaKnown RBP20.96■□□□□ 0.95
PTPN4-207ENST00000460162 MRPL57Q9BQC6 102 aaKnown RBP20.96■□□□□ 0.95
PTPN4-207ENST00000460162 TTYH2Q9BSA4 534 aa20.96■□□□□ 0.95
PTPN4-207ENST00000460162 MRPL46Q9H2W6 279 aaKnown RBP20.96■□□□□ 0.95
PTPN4-207ENST00000460162 B4GALT7Q9UBV7 327 aa20.96■□□□□ 0.95
PTPN4-207ENST00000460162 CNOT11Q9UKZ1 510 aaKnown RBP20.96■□□□□ 0.95
PTPN4-207ENST00000460162 TEP1Q99973 2627 aaKnown RBP20.96■□□□□ 0.95
PTPN4-207ENST00000460162 C2orf92A0A1B0GVN3 265 aa20.95■□□□□ 0.94
PTPN4-207ENST00000460162 CAPN14A8MX76 684 aa20.95■□□□□ 0.94
PTPN4-207ENST00000460162 TOXO94900 526 aa20.95■□□□□ 0.94
PTPN4-207ENST00000460162 ENDOUP21128 410 aaKnown RBP20.95■□□□□ 0.94
PTPN4-207ENST00000460162 ECHS1P30084 290 aa20.95■□□□□ 0.94
PTPN4-207ENST00000460162 SSTR4P31391 388 aa20.95■□□□□ 0.94
PTPN4-207ENST00000460162 TMED10P49755 219 aaKnown RBP20.95■□□□□ 0.94
PTPN4-207ENST00000460162 C6orf163Q5TEZ5 329 aa20.95■□□□□ 0.94
PTPN4-207ENST00000460162 NOA1Q8NC60 698 aaKnown RBP20.95■□□□□ 0.94
PTPN4-207ENST00000460162 OR4F6Q8NGB9 312 aa20.95■□□□□ 0.94
PTPN4-207ENST00000460162 ZNF597Q96LX8 424 aa20.95■□□□□ 0.94
PTPN4-207ENST00000460162 DOHHQ9BU89 302 aa20.95■□□□□ 0.94
PTPN4-207ENST00000460162 MRPL1Q9BYD6 325 aaKnown RBP20.95■□□□□ 0.94
PTPN4-207ENST00000460162 ELOVL6Q9H5J4 265 aa20.95■□□□□ 0.94
PTPN4-207ENST00000460162 EXO5Q9H790 373 aa20.95■□□□□ 0.94
PTPN4-207ENST00000460162 PROK2Q9HC23 129 aa20.95■□□□□ 0.94
PTPN4-207ENST00000460162 TNFRSF10DQ9UBN6 386 aa20.95■□□□□ 0.94
PTPN4-207ENST00000460162 ACAD8Q9UKU7 415 aa20.95■□□□□ 0.94
PTPN4-207ENST00000460162 AKAP9Q99996 3911 aa20.95■□□□□ 0.94
PTPN4-207ENST00000460162 ARHGAP21Q5T5U3 1957 aa20.94■□□□□ 0.94
PTPN4-207ENST00000460162 A0A1W2PS29 197 aa20.94■□□□□ 0.94
PTPN4-207ENST00000460162 ANKRD33BA6NCL7 494 aa20.94■□□□□ 0.94
PTPN4-207ENST00000460162 PGRMC2O15173 223 aa20.94■□□□□ 0.94
PTPN4-207ENST00000460162 OTCP00480 354 aa20.94■□□□□ 0.94
PTPN4-207ENST00000460162 HOXD4P09016 255 aaPredicted RBP20.94■□□□□ 0.94
PTPN4-207ENST00000460162 GABRA1P14867 456 aa20.94■□□□□ 0.94
PTPN4-207ENST00000460162 FUT7Q11130 342 aa20.94■□□□□ 0.94
PTPN4-207ENST00000460162 C1orf185Q5T7R7 199 aa20.94■□□□□ 0.94
PTPN4-207ENST00000460162 HLA-DQA1Q5Y7H0 255 aa20.94■□□□□ 0.94
PTPN4-207ENST00000460162 RTL6Q6ICC9 239 aa20.94■□□□□ 0.94
PTPN4-207ENST00000460162 METTL4Q8N3J2 472 aa20.94■□□□□ 0.94
PTPN4-207ENST00000460162 MNS1Q8NEH6 495 aa20.94■□□□□ 0.94
PTPN4-207ENST00000460162 MYRIPQ8NFW9 859 aa20.94■□□□□ 0.94
PTPN4-207ENST00000460162 OR4K14Q8NGD5 310 aa20.94■□□□□ 0.94
PTPN4-207ENST00000460162 ZNF483Q8TF39 744 aaPredicted RBP20.94■□□□□ 0.94
PTPN4-207ENST00000460162 DCAKDQ8WVC6 231 aa20.94■□□□□ 0.94
PTPN4-207ENST00000460162 IFT81Q8WYA0 676 aa20.94■□□□□ 0.94
PTPN4-207ENST00000460162 UCN3Q969E3 161 aa20.94■□□□□ 0.94
PTPN4-207ENST00000460162 C1QTNF3Q9BXJ4 246 aa20.94■□□□□ 0.94
PTPN4-207ENST00000460162 UCK2Q9BZX2 261 aa20.94■□□□□ 0.94
PTPN4-207ENST00000460162 ACKR4Q9NPB9 350 aa20.94■□□□□ 0.94
PTPN4-207ENST00000460162 SPRR3Q9UBC9 169 aa20.94■□□□□ 0.94
PTPN4-207ENST00000460162 PCDHGB3Q9Y5G1 929 aa20.94■□□□□ 0.94
PTPN4-207ENST00000460162 CELSR1Q9NYQ6 3014 aa20.94■□□□□ 0.94
PTPN4-207ENST00000460162 A0A087WUV0 522 aaPredicted RBP20.93■□□□□ 0.94
PTPN4-207ENST00000460162 TRIM49D1C9J1S8 452 aa20.93■□□□□ 0.94
PTPN4-207ENST00000460162 FAM47E-STBD1D6RA91 191 aa20.93■□□□□ 0.94
PTPN4-207ENST00000460162 POC1B-GALNT4F8VUJ3 575 aa20.93■□□□□ 0.94
PTPN4-207ENST00000460162 TP53I11O14683 189 aa20.93■□□□□ 0.94
PTPN4-207ENST00000460162 GUCY1B2O75343 617 aa20.93■□□□□ 0.94
PTPN4-207ENST00000460162 KLK1P06870 262 aa20.93■□□□□ 0.94
PTPN4-207ENST00000460162 RFPL3SP0C7P2 107 aa20.93■□□□□ 0.94
PTPN4-207ENST00000460162 GLI4P10075 376 aa20.93■□□□□ 0.94
PTPN4-207ENST00000460162 ZFP36L2P47974 494 aaKnown RBP20.93■□□□□ 0.94
PTPN4-207ENST00000460162 KRTAP10-9P60411 292 aa20.93■□□□□ 0.94
PTPN4-207ENST00000460162 GLE1Q53GS7 698 aaKnown RBP20.93■□□□□ 0.94
PTPN4-207ENST00000460162 CCNYL2Q5T2Q4 361 aa20.93■□□□□ 0.94
PTPN4-207ENST00000460162 COMMD6Q7Z4G1 85 aa20.93■□□□□ 0.94
PTPN4-207ENST00000460162 MILR1Q7Z6M3 343 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms