RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 EXOSC8Q96B26 276 aaKnown RBP9.38□□□□□ -0.91
RFX3-210ENST00000457373 C11orf24Q96F05 449 aaPredicted RBP9.38□□□□□ -0.91
RFX3-210ENST00000457373 SENP5Q96HI0 755 aaPredicted RBP9.38□□□□□ -0.91
RFX3-210ENST00000457373 ART5Q96L15 291 aa9.38□□□□□ -0.91
RFX3-210ENST00000457373 PPP1R36Q96LQ0 422 aa9.38□□□□□ -0.91
RFX3-210ENST00000457373 UTP23Q9BRU9 249 aaKnown RBP9.38□□□□□ -0.91
RFX3-210ENST00000457373 TRIM4Q9C037 500 aa9.38□□□□□ -0.91
RFX3-210ENST00000457373 BRINP2Q9C0B6 783 aa9.38□□□□□ -0.91
RFX3-210ENST00000457373 EPN3Q9H201 632 aa9.38□□□□□ -0.91
RFX3-210ENST00000457373 VIPAS39Q9H9C1 493 aa9.38□□□□□ -0.91
RFX3-210ENST00000457373 UTS2RQ9UKP6 389 aa9.38□□□□□ -0.91
RFX3-210ENST00000457373 PPIEQ9UNP9 301 aaKnown RBP9.38□□□□□ -0.91
RFX3-210ENST00000457373 ERVK-19Q9WJR5 959 aa9.38□□□□□ -0.91
RFX3-210ENST00000457373 RAP2CQ9Y3L5 183 aa9.38□□□□□ -0.91
RFX3-210ENST00000457373 ZNF780BQ9Y6R6 833 aa9.38□□□□□ -0.91
RFX3-210ENST00000457373 CACNA1GO43497 2377 aa9.38□□□□□ -0.91
RFX3-210ENST00000457373 FAM208BQ5VWN6 2430 aa9.37□□□□□ -0.91
RFX3-210ENST00000457373 OR5H15A6NDH6 313 aa9.37□□□□□ -0.91
RFX3-210ENST00000457373 FCHO1O14526 889 aa9.37□□□□□ -0.91
RFX3-210ENST00000457373 LSM1O15116 133 aaKnown RBP9.37□□□□□ -0.91
RFX3-210ENST00000457373 SASH3O75995 380 aa9.37□□□□□ -0.91
RFX3-210ENST00000457373 CT62P0C5K7 136 aa9.37□□□□□ -0.91
RFX3-210ENST00000457373 PCSK2P16519 638 aa9.37□□□□□ -0.91
RFX3-210ENST00000457373 CSNK2A2P19784 350 aaPredicted RBP9.37□□□□□ -0.91
RFX3-210ENST00000457373 GALNSP34059 522 aa9.37□□□□□ -0.91
RFX3-210ENST00000457373 PTGER1P34995 402 aa9.37□□□□□ -0.91
RFX3-210ENST00000457373 CD96P40200 585 aa9.37□□□□□ -0.91
RFX3-210ENST00000457373 RPL14P50914 215 aaKnown RBP9.37□□□□□ -0.91
RFX3-210ENST00000457373 SLC18A1P54219 525 aa9.37□□□□□ -0.91
RFX3-210ENST00000457373 RNF4P78317 190 aa9.37□□□□□ -0.91
RFX3-210ENST00000457373 DUSP2Q05923 314 aa9.37□□□□□ -0.91
RFX3-210ENST00000457373 ZNF169Q14929 603 aaPredicted RBP9.37□□□□□ -0.91
RFX3-210ENST00000457373 PDCD2Q16342 344 aaPredicted RBP9.37□□□□□ -0.91
RFX3-210ENST00000457373 RFTN2Q52LD8 501 aaPredicted RBP9.37□□□□□ -0.91
RFX3-210ENST00000457373 C6orf163Q5TEZ5 329 aa9.37□□□□□ -0.91
RFX3-210ENST00000457373 FAM111BQ6SJ93 734 aa9.37□□□□□ -0.91
RFX3-210ENST00000457373 HSDL2Q6YN16 418 aa9.37□□□□□ -0.91
RFX3-210ENST00000457373 C16orf47Q6ZP98 133 aaPredicted RBP9.37□□□□□ -0.91
RFX3-210ENST00000457373 RNF165Q6ZSG1 346 aa9.37□□□□□ -0.91
RFX3-210ENST00000457373 CISD2Q8N5K1 135 aaKnown RBP9.37□□□□□ -0.91
RFX3-210ENST00000457373 Q8NA96 180 aa9.37□□□□□ -0.91
RFX3-210ENST00000457373 SUN3Q8TAQ9 357 aa9.37□□□□□ -0.91
RFX3-210ENST00000457373 FAM76AQ8TAV0 307 aa9.37□□□□□ -0.91
RFX3-210ENST00000457373 GFM2Q969S9 779 aaKnown RBP9.37□□□□□ -0.91
RFX3-210ENST00000457373 ITPKCQ96DU7 683 aa9.37□□□□□ -0.91
RFX3-210ENST00000457373 CNRIP1Q96F85 164 aaPredicted RBP9.37□□□□□ -0.91
RFX3-210ENST00000457373 METTL2AQ96IZ6 378 aaKnown RBP9.37□□□□□ -0.91
RFX3-210ENST00000457373 EGLN2Q96KS0 407 aa9.37□□□□□ -0.91
RFX3-210ENST00000457373 PPP3R2Q96LZ3 170 aa9.37□□□□□ -0.91
RFX3-210ENST00000457373 C3orf30Q96M34 536 aa9.37□□□□□ -0.91
RFX3-210ENST00000457373 SORT1Q99523 831 aa9.37□□□□□ -0.91
RFX3-210ENST00000457373 PNPOQ9NVS9 261 aa9.37□□□□□ -0.91
RFX3-210ENST00000457373 COPS7AQ9UBW8 275 aa9.37□□□□□ -0.91
RFX3-210ENST00000457373 BAIAP2L1Q9UHR4 511 aa9.37□□□□□ -0.91
RFX3-210ENST00000457373 TRAV17A0A0B4J275 112 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 NPIPB8E9PQR5 432 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 WWP2O00308 870 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 AKAP10O43572 662 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 ITGA10O75578 1167 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 SORBS2O94875 1100 aaKnown RBP9.36□□□□□ -0.91
RFX3-210ENST00000457373 LRATO95237 230 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 PLA2G2AP14555 144 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 TACR1P25103 407 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 SSTR4P31391 388 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 GSTM5P46439 218 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 TNFSF10P50591 281 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 HK2P52789 917 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 TUBA3CQ13748 450 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 INPP5JQ15735 1006 aaPredicted RBP9.36□□□□□ -0.91
RFX3-210ENST00000457373 PRSS53Q2L4Q9 553 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 SPRED3Q2MJR0 410 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 ATP6AP1LQ52LC2 224 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 PRR30Q53SZ7 412 aaPredicted RBP9.36□□□□□ -0.91
RFX3-210ENST00000457373 ZNF468Q5VIY5 522 aaPredicted RBP9.36□□□□□ -0.91
RFX3-210ENST00000457373 ATG16L1Q676U5 607 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 SPINK14Q6IE38 97 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 FAM71E1Q6IPT2 247 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 TUBA3EQ6PEY2 450 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 RNF111Q6ZNA4 994 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 TICAM1Q8IUC6 712 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 TRIM42Q8IWZ5 723 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 GALNT12Q8IXK2 581 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 LGI4Q8N135 537 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 TMEM156Q8N614 296 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 ADCY4Q8NFM4 1077 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 OR5L2Q8NGL0 311 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 CLHC1Q8NHS4 586 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 CPT1CQ8TCG5 803 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 TUBGCP3Q96CW5 907 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 TSSK3Q96PN8 268 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 SIGLEC12Q96PQ1 595 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 SH3GL2Q99962 352 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 C1orf50Q9BV19 199 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 RNF32Q9H0A6 362 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 MANSC1Q9H8J5 431 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 CXorf21Q9HAI6 301 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 MYNNQ9NPC7 610 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 MIEF1Q9NQG6 463 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 KLHL1Q9NR64 748 aa9.36□□□□□ -0.91
RFX3-210ENST00000457373 GIMAP4Q9NUV9 329 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms