RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 FGF4P08620 206 aa21.47■■□□□ 1.03
CBX3-204ENST00000456948 IL3P08700 152 aa21.47■■□□□ 1.03
CBX3-204ENST00000456948 SLC37A1P57057 533 aa21.47■■□□□ 1.03
CBX3-204ENST00000456948 SRSF11Q05519 484 aaKnown RBP21.47■■□□□ 1.03
CBX3-204ENST00000456948 SRSF1Q07955 248 aaKnown RBP eCLIP21.47■■□□□ 1.034e-9■■□□□ 11.7
CBX3-204ENST00000456948 ZNF763Q0D2J5 394 aa21.47■■□□□ 1.03
CBX3-204ENST00000456948 DGAT2L6Q6ZPD8 337 aa21.47■■□□□ 1.03
CBX3-204ENST00000456948 NUDCD3Q8IVD9 361 aa21.47■■□□□ 1.03
CBX3-204ENST00000456948 CLYBLQ8N0X4 340 aa21.47■■□□□ 1.03
CBX3-204ENST00000456948 GOLM1Q8NBJ4 401 aa21.47■■□□□ 1.03
CBX3-204ENST00000456948 C16orf78Q8WTQ4 265 aa21.47■■□□□ 1.03
CBX3-204ENST00000456948 EHD3Q9NZN3 535 aa21.47■■□□□ 1.03
CBX3-204ENST00000456948 SLC5A6Q9Y289 635 aa21.47■■□□□ 1.03
CBX3-204ENST00000456948 CLEC18AA5D8T8 446 aa21.46■■□□□ 1.03
CBX3-204ENST00000456948 TM9SF1O15321 606 aa21.46■■□□□ 1.03
CBX3-204ENST00000456948 TYROBPO43914 113 aa21.46■■□□□ 1.03
CBX3-204ENST00000456948 PEX1O43933 1283 aa21.46■■□□□ 1.03
CBX3-204ENST00000456948 SEC22BO75396 215 aa21.46■■□□□ 1.03
CBX3-204ENST00000456948 OR6B1O95007 311 aa21.46■■□□□ 1.03
CBX3-204ENST00000456948 ATP1B1P05026 303 aa21.46■■□□□ 1.03
CBX3-204ENST00000456948 BPGMP07738 259 aa21.46■■□□□ 1.03
CBX3-204ENST00000456948 ZNF24P17028 368 aa21.46■■□□□ 1.03
CBX3-204ENST00000456948 FEN1P39748 380 aaKnown RBP21.46■■□□□ 1.03
CBX3-204ENST00000456948 SOX3P41225 446 aa21.46■■□□□ 1.03
CBX3-204ENST00000456948 CASP6P55212 293 aa21.46■■□□□ 1.03
CBX3-204ENST00000456948 PER3P56645 1201 aa21.46■■□□□ 1.03
CBX3-204ENST00000456948 NRG3P56975 720 aa21.46■■□□□ 1.03
CBX3-204ENST00000456948 RAE1P78406 368 aaKnown RBP21.46■■□□□ 1.03
CBX3-204ENST00000456948 PMP22Q01453 160 aa21.46■■□□□ 1.03
CBX3-204ENST00000456948 CLEC6AQ6EIG7 209 aa21.46■■□□□ 1.03
CBX3-204ENST00000456948 CLEC18BQ6UXF7 455 aa21.46■■□□□ 1.03
CBX3-204ENST00000456948 C16orf47Q6ZP98 133 aaPredicted RBP21.46■■□□□ 1.03
CBX3-204ENST00000456948 RNF165Q6ZSG1 346 aa21.46■■□□□ 1.03
CBX3-204ENST00000456948 C9orf40Q8IXQ3 194 aa21.46■■□□□ 1.03
CBX3-204ENST00000456948 LRRC25Q8N386 305 aaPredicted RBP21.46■■□□□ 1.03
CBX3-204ENST00000456948 VWA5B2Q8N398 1253 aa21.46■■□□□ 1.03
CBX3-204ENST00000456948 CLEC18CQ8NCF0 446 aa21.46■■□□□ 1.03
CBX3-204ENST00000456948 PSD4Q8NDX1 1056 aa21.46■■□□□ 1.03
CBX3-204ENST00000456948 TP53INP1Q96A56 240 aa21.46■■□□□ 1.03
CBX3-204ENST00000456948 ZIM3Q96PE6 472 aa21.46■■□□□ 1.03
CBX3-204ENST00000456948 BRINP2Q9C0B6 783 aa21.46■■□□□ 1.03
CBX3-204ENST00000456948 OR10A5Q9H207 317 aa21.46■■□□□ 1.03
CBX3-204ENST00000456948 OSGIN2Q9Y236 505 aa21.46■■□□□ 1.03
CBX3-204ENST00000456948 FIS1Q9Y3D6 152 aa21.46■■□□□ 1.03
CBX3-204ENST00000456948 ACTL7BQ9Y614 415 aa21.46■■□□□ 1.03
CBX3-204ENST00000456948 A0A1B0GUH1 482 aa21.45■■□□□ 1.02
CBX3-204ENST00000456948 HRKO00198 91 aa21.45■■□□□ 1.02
CBX3-204ENST00000456948 UNC5CO95185 931 aa21.45■■□□□ 1.02
CBX3-204ENST00000456948 P04436 131 aa21.45■■□□□ 1.02
CBX3-204ENST00000456948 MPIP34949 423 aa21.45■■□□□ 1.02
CBX3-204ENST00000456948 TDGF1P3P51864 188 aa21.45■■□□□ 1.02
CBX3-204ENST00000456948 C2orf80Q0P641 193 aa21.45■■□□□ 1.02
CBX3-204ENST00000456948 FUT7Q11130 342 aa21.45■■□□□ 1.02
CBX3-204ENST00000456948 MAP4K2Q12851 820 aa21.45■■□□□ 1.02
CBX3-204ENST00000456948 ARL13AQ5H913 290 aaPredicted RBP21.45■■□□□ 1.02
CBX3-204ENST00000456948 ZNF227Q86WZ6 799 aa21.45■■□□□ 1.02
CBX3-204ENST00000456948 SULF2Q8IWU5 870 aa21.45■■□□□ 1.02
CBX3-204ENST00000456948 CDC26Q8NHZ8 85 aa21.45■■□□□ 1.02
CBX3-204ENST00000456948 PGM2Q96G03 612 aa21.45■■□□□ 1.02
CBX3-204ENST00000456948 FRMD6Q96NE9 622 aa21.45■■□□□ 1.02
CBX3-204ENST00000456948 CCT7Q99832 543 aa21.45■■□□□ 1.02
CBX3-204ENST00000456948 EBPLQ9BY08 206 aa21.45■■□□□ 1.02
CBX3-204ENST00000456948 WWTR1Q9GZV5 400 aa21.45■■□□□ 1.02
CBX3-204ENST00000456948 MIEF1Q9NQG6 463 aa21.45■■□□□ 1.02
CBX3-204ENST00000456948 C1orf109Q9NX04 203 aa21.45■■□□□ 1.02
CBX3-204ENST00000456948 TRAF6Q9Y4K3 522 aa21.45■■□□□ 1.02
CBX3-204ENST00000456948 HECTD1Q9ULT8 2610 aa21.45■■□□□ 1.02
CBX3-204ENST00000456948 BCAS2O75934 225 aaPredicted RBP21.44■■□□□ 1.02
CBX3-204ENST00000456948 ZWINTO95229 277 aa21.44■■□□□ 1.02
CBX3-204ENST00000456948 PRPH2P23942 346 aa21.44■■□□□ 1.02
CBX3-204ENST00000456948 MEOX1P50221 254 aa21.44■■□□□ 1.02
CBX3-204ENST00000456948 KANK2Q63ZY3 851 aa21.44■■□□□ 1.02
CBX3-204ENST00000456948 NOXRED1Q6NXP6 359 aa21.44■■□□□ 1.02
CBX3-204ENST00000456948 BNC2Q6ZN30 1099 aaPredicted RBP21.44■■□□□ 1.02
CBX3-204ENST00000456948 IKBIPQ70UQ0 350 aa21.44■■□□□ 1.02
CBX3-204ENST00000456948 DDIASQ8IXT1 998 aa21.44■■□□□ 1.02
CBX3-204ENST00000456948 CPSF7Q8N684 471 aaKnown RBP21.44■■□□□ 1.02
CBX3-204ENST00000456948 DOK4Q8TEW6 326 aa21.44■■□□□ 1.02
CBX3-204ENST00000456948 SSC4DQ8WTU2 575 aa21.44■■□□□ 1.02
CBX3-204ENST00000456948 ERP27Q96DN0 273 aa21.44■■□□□ 1.02
CBX3-204ENST00000456948 C11orf24Q96F05 449 aaPredicted RBP21.44■■□□□ 1.02
CBX3-204ENST00000456948 GPR137Q96N19 417 aa21.44■■□□□ 1.02
CBX3-204ENST00000456948 BBS4Q96RK4 519 aa21.44■■□□□ 1.02
CBX3-204ENST00000456948 MECRQ9BV79 373 aa21.44■■□□□ 1.02
CBX3-204ENST00000456948 LRTM1Q9HBL6 345 aa21.44■■□□□ 1.02
CBX3-204ENST00000456948 KCNK9Q9NPC2 374 aa21.44■■□□□ 1.02
CBX3-204ENST00000456948 SLC35C2Q9NQQ7 365 aa21.44■■□□□ 1.02
CBX3-204ENST00000456948 SACM1LQ9NTJ5 587 aa21.44■■□□□ 1.02
CBX3-204ENST00000456948 PRODH2Q9UF12 536 aa21.44■■□□□ 1.02
CBX3-204ENST00000456948 BCAP29Q9UHQ4 241 aa21.44■■□□□ 1.02
CBX3-204ENST00000456948 NPIPA5E9PKD4 350 aa21.43■■□□□ 1.02
CBX3-204ENST00000456948 ACOT7O00154 380 aa21.43■■□□□ 1.02
CBX3-204ENST00000456948 TFECO14948 347 aaPredicted RBP21.43■■□□□ 1.02
CBX3-204ENST00000456948 BIRC5O15392 142 aa21.43■■□□□ 1.02
CBX3-204ENST00000456948 SNUPNO95149 360 aaKnown RBP21.43■■□□□ 1.02
CBX3-204ENST00000456948 CREB1P16220 341 aa21.43■■□□□ 1.02
CBX3-204ENST00000456948 DDX5P17844 614 aaKnown RBP21.43■■□□□ 1.02
CBX3-204ENST00000456948 DDCP20711 480 aa21.43■■□□□ 1.02
CBX3-204ENST00000456948 MST1P26927 711 aa21.43■■□□□ 1.02
CBX3-204ENST00000456948 SSTR4P31391 388 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms