RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 SGPP1Q9BX95 441 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 XKR8Q9H6D3 395 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 ZNF556Q9HAH1 456 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 C1GALT1Q9NS00 363 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 OBP2AQ9NY56 170 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 TAC3Q9UHF0 121 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 CA5BQ9Y2D0 317 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 DYRK1BQ9Y463 629 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 TICRRQ7Z2Z1 1910 aa11.77□□□□□ -0.53
LINC00959-201ENST00000456581 DENND4AQ7Z401 1863 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 A0A0B4J293 547 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 FEZF1A0PJY2 475 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 SAGE2PA6NJ88 616 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 CCDC85CA6NKD9 419 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 PDZK1P1A8MUH7 402 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 PLD2O14939 933 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 KIR2DL1P43626 348 aaPredicted RBP11.76□□□□□ -0.53
LINC00959-201ENST00000456581 XCR1P46094 333 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 CCDC80Q76M96 950 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 HOMEZQ8IX15 550 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 OR14C36Q8NHC7 312 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 ASB15Q8WXK1 588 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 COQ8BQ96D53 544 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 RNF31Q96EP0 1072 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 RSPH9Q9H1X1 276 aaPredicted RBP11.76□□□□□ -0.53
LINC00959-201ENST00000456581 RANGRFQ9HD47 186 aaPredicted RBP11.76□□□□□ -0.53
LINC00959-201ENST00000456581 CCDC177Q9NQR7 707 aaPredicted RBP11.76□□□□□ -0.53
LINC00959-201ENST00000456581 DZANK1Q9NVP4 752 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 PAQR5Q9NXK6 330 aaPredicted RBP11.76□□□□□ -0.53
LINC00959-201ENST00000456581 NUFIP1Q9UHK0 495 aaKnown RBP11.76□□□□□ -0.53
LINC00959-201ENST00000456581 BTNL2Q9UIR0 455 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 CARD8Q9Y2G2 431 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 H3BN98 237 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 SLC31A1O15431 190 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 VEGFDO43915 354 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 CSO75390 466 aaKnown RBP11.76□□□□□ -0.53
LINC00959-201ENST00000456581 C1GALT1C1LP0DN25 315 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 FLYWCH1Q4VC44 716 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 FAM46CQ5VWP2 391 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 VN1R5Q7Z5H4 357 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 COMTD1Q86VU5 262 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.76□□□□□ -0.53
LINC00959-201ENST00000456581 DEPDC4Q8N2C3 294 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 SYT14Q8NB59 555 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 C7orf57Q8NEG2 295 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 OR4D11Q8NGI4 311 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 SLC5A11Q8WWX8 675 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 EFHD2Q96C19 240 aaPredicted RBP11.76□□□□□ -0.53
LINC00959-201ENST00000456581 LINC00615Q96LM1 132 aaPredicted RBP11.76□□□□□ -0.53
LINC00959-201ENST00000456581 SLC6A18Q96N87 628 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 PIP5K1AQ99755 562 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 SLC30A2Q9BRI3 323 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 SMURF1Q9HCE7 757 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 FTSJ1Q9UET6 329 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 MSRAQ9UJ68 235 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 GPR34Q9UPC5 381 aa11.76□□□□□ -0.53
LINC00959-201ENST00000456581 SERTM1A2A2V5 107 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 SMLR1H3BR10 107 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 NME6O75414 186 aaPredicted RBP11.75□□□□□ -0.53
LINC00959-201ENST00000456581 BCHEP06276 602 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 IL3P08700 152 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 HBQ1P09105 142 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 ANXA8P13928 327 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 COL9A1P20849 921 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 CBLP22681 906 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 TFF2Q03403 129 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 TMEM196Q5HYL7 178 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 NXPE4Q6UWF7 544 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 ADAMTSL4Q6UY14 1074 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 DEF8Q6ZN54 512 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 PDZD3Q86UT5 571 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 LRRTM4Q86VH4 590 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 TAGAPQ8N103 731 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 DTX3Q8N9I9 347 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 JPH3Q8WXH2 748 aaPredicted RBP11.75□□□□□ -0.53
LINC00959-201ENST00000456581 SLC6A16Q9GZN6 736 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 REEP4Q9H6H4 257 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 SLAMF7Q9NQ25 335 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 DMRT3Q9NQL9 472 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 CCDC59Q9P031 241 aaKnown RBP11.75□□□□□ -0.53
LINC00959-201ENST00000456581 HCN4Q9Y3Q4 1203 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 PEX16Q9Y5Y5 336 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 SCN3AQ9NY46 2000 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 A0A0G2JN53 185 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 C17orf113A0A1B0GUU1 675 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 OR52A4PA6NMU1 304 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 NPIPB8E9PQR5 432 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 CCRL2O00421 344 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 FURINP09958 794 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 PTNP21246 168 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 ALDH9A1P49189 494 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 EEF1A2Q05639 463 aaKnown RBP11.75□□□□□ -0.53
LINC00959-201ENST00000456581 TBRG1Q3YBR2 411 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 PRAMEF14Q5SWL7 426 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 PRAMEF13Q5VWM6 474 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 PLAG1Q6DJT9 500 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 SHFQ7M4L6 423 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 SZRD1Q7Z422 152 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 UBQLNLQ8IYU4 475 aa11.75□□□□□ -0.53
LINC00959-201ENST00000456581 LILRB4Q8NHJ6 448 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms