RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 HEXBP07686 556 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 FGF4P08620 206 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 HBQ1P09105 142 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 UGT2B7P16662 529 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 BMXP51813 675 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 SPHARQ15513 63 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 CPSF6Q16630 551 aaKnown RBP eCLIP5.01□□□□□ -1.61
CSMD3-204ENST00000455883 MPEG1Q2M385 716 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 CATSPEREQ5SY80 951 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 CXorf57Q6NSI4 855 aaKnown RBP5.01□□□□□ -1.61
CSMD3-204ENST00000455883 RNF130Q86XS8 419 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 FCRL1Q96LA6 429 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 PDCD2LQ9BRP1 358 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 GATA5Q9BWX5 397 aaPredicted RBP5.01□□□□□ -1.61
CSMD3-204ENST00000455883 AGPAT4Q9NRZ5 378 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 LRIT2A6NDA9 550 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 SLC15A5A6NIM6 579 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 HTRA2O43464 458 aaPredicted RBP5.01□□□□□ -1.61
CSMD3-204ENST00000455883 PSMD10O75832 226 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 JTBO76095 146 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 IGHEP01854 428 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 ARF4P18085 180 aaPredicted RBP5.01□□□□□ -1.61
CSMD3-204ENST00000455883 MAKP20794 623 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 GABRA5P31644 462 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 MAP2K6P52564 334 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 CDH15P55291 814 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF92Q03936 586 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 NFATC3Q12968 1075 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 MYLK3Q32MK0 819 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 ATAT1Q5SQI0 421 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 WSCD1Q658N2 575 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 TFAP2DQ7Z6R9 452 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 SAPCD2Q86UD0 394 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 TMEM145Q8NBT3 493 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 CMKLR1Q99788 373 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 SDR39U1Q9NRG7 319 aaPredicted RBP5.01□□□□□ -1.61
CSMD3-204ENST00000455883 NLE1Q9NVX2 485 aaPredicted RBP5.01□□□□□ -1.61
CSMD3-204ENST00000455883 SLC6A5Q9Y345 797 aa5.01□□□□□ -1.61
CSMD3-204ENST00000455883 TCRBV5S4A2TA0A5A2 114 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 C2CD4BA6NLJ0 364 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 NTSR2O95665 410 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 H2AFB2P0C5Z0 115 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 CXCL8P10145 99 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 WNT4P56705 351 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 GLO1Q04760 184 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 RPA4Q13156 261 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 C6orf141Q5SZD1 244 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 TMEM214Q6NUQ4 689 aaKnown RBP5□□□□□ -1.61
CSMD3-204ENST00000455883 SSX6Q7RTT6 188 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 CACNG6Q9BXT2 260 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 ANKMY1Q9P2S6 941 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 HSFX4A0A1B0GTS1 333 aaPredicted RBP5□□□□□ -1.61
CSMD3-204ENST00000455883 LOC285095A0A1B0GVY8 99 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 HSFX3A0A1B0GWH4 333 aaPredicted RBP5□□□□□ -1.61
CSMD3-204ENST00000455883 ARRDC5A6NEK1 342 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 TMX2-CTNND1H3BSU7 103 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 AURKAO14965 403 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 MUSKO15146 869 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 OR2T1O43869 369 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 PCDH7O60245 1069 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 KCNK2O95069 426 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 ZDHHC11BP0C7U3 371 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 IMPA1P29218 277 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 FMO3P31513 532 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 MC4RP32245 332 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 PLXNA3P51805 1871 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 EPHA10Q5JZY3 1008 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 CDC42EP5Q6NZY7 148 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 TTPALQ9BTX7 342 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 FN3KRPQ9HA64 309 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 YTHDF2Q9Y5A9 579 aaKnown RBP5□□□□□ -1.61
CSMD3-204ENST00000455883 UNGP13051 313 aaPredicted RBP5□□□□□ -1.61
CSMD3-204ENST00000455883 IDH3GP51553 393 aaPredicted RBP5□□□□□ -1.61
CSMD3-204ENST00000455883 PTPRCAPQ14761 206 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 ESCO2Q56NI9 601 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 C9orf57Q5W0N0 161 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 MBLAC2Q68D91 279 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 TMUB2Q71RG4 321 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 ASRGL1Q7L266 308 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 BCL7CQ8WUZ0 217 aaPredicted RBP5□□□□□ -1.61
CSMD3-204ENST00000455883 RNF141Q8WVD5 230 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 TMEM203Q969S6 136 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 RRNAD1Q96FB5 475 aaKnown RBP5□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF395Q9H8N7 513 aaPredicted RBP5□□□□□ -1.61
CSMD3-204ENST00000455883 F8P00451 2351 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 BCL9O00512 1426 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 FOXE1O00358 373 aaPredicted RBP5□□□□□ -1.61
CSMD3-204ENST00000455883 PPP1R2P9O14990 202 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 CREG1O75629 220 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 CTNNB1P35222 781 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 MRPS6P82932 125 aaKnown RBP5□□□□□ -1.61
CSMD3-204ENST00000455883 CTU2Q2VPK5 515 aaKnown RBP5□□□□□ -1.61
CSMD3-204ENST00000455883 PHF6Q8IWS0 365 aaKnown RBP eCLIP5□□□□□ -1.61
CSMD3-204ENST00000455883 ZC3H3Q8IXZ2 948 aaKnown RBP5□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF454Q8N9F8 522 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 CHST4Q8NCG5 386 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 PROKR2Q8NFJ6 384 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 FANK1Q8TC84 345 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 ZNF675Q8TD23 568 aa5□□□□□ -1.61
CSMD3-204ENST00000455883 NANOS1Q8WY41 292 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms