RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 MSX2P35548 267 aaPredicted RBP4.63□□□□□ -1.67
RIF1-207ENST00000454583 GRK6P43250 576 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 POLE2P56282 527 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 STX1BP61266 288 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 MRPS22P82650 360 aaKnown RBP4.63□□□□□ -1.67
RIF1-207ENST00000454583 PSG6Q00889 435 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 LIPEQ05469 1076 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 CCDC6Q16204 474 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 AP5B1Q2VPB7 878 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 SYTL3Q4VX76 610 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 CT45A2Q5DJT8 189 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 XKR6Q5GH73 641 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 COX20Q5RI15 118 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 MRGPREQ86SM8 312 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 TMPRSS11BQ86T26 416 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 ANKRD46Q86W74 232 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 OR7A2PQ8NGA2 310 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.63□□□□□ -1.67
RIF1-207ENST00000454583 OIT3Q8WWZ8 545 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 SCYL1Q96KG9 808 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 PPP3R2Q96LZ3 170 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 RILPQ96NA2 401 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 FAM192AQ9GZU8 254 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 REEP4Q9H6H4 257 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 IMP3Q9NV31 184 aaKnown RBP4.63□□□□□ -1.67
RIF1-207ENST00000454583 PADI2Q9Y2J8 665 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 TDRKHQ9Y2W6 561 aaKnown RBP4.63□□□□□ -1.67
RIF1-207ENST00000454583 AP4S1Q9Y587 144 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 TAF4O00268 1085 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 HNRNPRO43390 633 aaKnown RBP4.63□□□□□ -1.67
RIF1-207ENST00000454583 ZNF682O95780 498 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 DRD2P14416 443 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 ADH7P40394 386 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 ISL1P61371 349 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 CAPRIN1Q14444 709 aaKnown RBP4.63□□□□□ -1.67
RIF1-207ENST00000454583 PDK3Q15120 406 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 GPR19Q15760 415 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 CTU2Q2VPK5 515 aaKnown RBP4.63□□□□□ -1.67
RIF1-207ENST00000454583 STPG1Q5TH74 334 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 MCATQ8IVS2 390 aaKnown RBP4.63□□□□□ -1.67
RIF1-207ENST00000454583 C1orf52Q8N6N3 182 aaKnown RBP4.63□□□□□ -1.67
RIF1-207ENST00000454583 CCNYL1Q8N7R7 359 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 GPR32P1Q8NGA4 272 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 RDH12Q96NR8 316 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 KCNC2Q96PR1 638 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 GRIP2Q9C0E4 1043 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 BCL2L10Q9HD36 194 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 MAN2C1Q9NTJ4 1040 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 WWOXQ9NZC7 414 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 RAPGEFL1Q9UHV5 662 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 SNX13Q9Y5W8 968 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 KCNE2Q9Y6J6 123 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 MGAQ8IWI9 3026 aa4.63□□□□□ -1.67
RIF1-207ENST00000454583 NUP214P35658 2090 aaPredicted RBP4.62□□□□□ -1.67
RIF1-207ENST00000454583 IGHV1-45A0A0A0MS14 117 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 C15orf38-AP3S2A0A0A6YYH1 394 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 CENPVL1A0A0U1RR11 272 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 H0Y3Z8 333 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 TSPAN2O60636 221 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 ULK1O75385 1050 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 SLITRK5O94991 958 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 IL3P08700 152 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 CEACAM1P13688 526 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 DCKP27707 260 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 SLC15A1P46059 708 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 STT3AP46977 705 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 CHN2P52757 468 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 EEF1A1P68104 462 aaKnown RBP4.62□□□□□ -1.67
RIF1-207ENST00000454583 TEKQ02763 1124 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 VAC14Q08AM6 782 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 LSAMPQ13449 338 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 COL9A2Q14055 689 aaPredicted RBP4.62□□□□□ -1.67
RIF1-207ENST00000454583 VEZF1Q14119 521 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 FLOT2Q14254 428 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 GTDC1Q4AE62 458 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 SPANXN4Q5MJ08 99 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 PRAMEF8Q5VWM4 474 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 PRAMEF7Q5VXH5 474 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 ENPP6Q6UWR7 440 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 SLC16A12Q6ZSM3 486 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 CBLL1Q75N03 491 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 ARPINQ7Z6K5 226 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 PLD3Q8IV08 490 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 C9orf40Q8IXQ3 194 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 EID2Q8N6I1 236 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 ZNF321PQ8N8H1 164 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 OR7G2Q8NG99 324 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 PRR7Q8TB68 274 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 CENPNQ96H22 339 aaPredicted RBP4.62□□□□□ -1.67
RIF1-207ENST00000454583 PPP1R36Q96LQ0 422 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 HBEGFQ99075 208 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 MTERF1Q99551 399 aaKnown RBP4.62□□□□□ -1.67
RIF1-207ENST00000454583 OR51B5Q9H339 312 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 SRMSQ9H3Y6 488 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 CXorf56Q9H5V9 222 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 HRASLS2Q9NWW9 162 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 FAM120CQ9NX05 1096 aaKnown RBP4.62□□□□□ -1.67
RIF1-207ENST00000454583 ATXN7L1Q9ULK2 861 aaPredicted RBP4.62□□□□□ -1.67
RIF1-207ENST00000454583 PLCL2Q9UPR0 1127 aa4.62□□□□□ -1.67
RIF1-207ENST00000454583 POLR3HQ9Y535 204 aaPredicted RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms