RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 RNF4P78317 190 aa18.53■□□□□ 0.56
COL9A3-202ENST00000452372 C2orf80Q0P641 193 aa18.53■□□□□ 0.56
COL9A3-202ENST00000452372 MRPL49Q13405 166 aaKnown RBP18.53■□□□□ 0.56
COL9A3-202ENST00000452372 ZNF267Q14586 743 aaPredicted RBP18.53■□□□□ 0.56
COL9A3-202ENST00000452372 EIF2S3LQ2VIR3 472 aaKnown RBP18.53■□□□□ 0.56
COL9A3-202ENST00000452372 ZNF750Q32MQ0 723 aa18.53■□□□□ 0.56
COL9A3-202ENST00000452372 RFTN2Q52LD8 501 aaPredicted RBP18.53■□□□□ 0.56
COL9A3-202ENST00000452372 TTMPQ5BVD1 217 aa18.53■□□□□ 0.56
COL9A3-202ENST00000452372 FHL5Q5TD97 284 aa18.53■□□□□ 0.56
COL9A3-202ENST00000452372 HIST2H2BCQ6DN03 193 aa18.53■□□□□ 0.56
COL9A3-202ENST00000452372 FAM71E1Q6IPT2 247 aa18.53■□□□□ 0.56
COL9A3-202ENST00000452372 KIRREL3Q8IZU9 778 aa18.53■□□□□ 0.56
COL9A3-202ENST00000452372 GOLGA6L1Q8N7Z2 621 aa18.53■□□□□ 0.56
COL9A3-202ENST00000452372 THAP3Q8WTV1 239 aaPredicted RBP18.53■□□□□ 0.56
COL9A3-202ENST00000452372 KLHL29Q96CT2 875 aa18.53■□□□□ 0.56
COL9A3-202ENST00000452372 ZNF681Q96N22 645 aa18.53■□□□□ 0.56
COL9A3-202ENST00000452372 UTP23Q9BRU9 249 aaKnown RBP18.53■□□□□ 0.56
COL9A3-202ENST00000452372 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.53■□□□□ 0.563e-6■■■□□ 14.6
COL9A3-202ENST00000452372 MYNNQ9NPC7 610 aa18.53■□□□□ 0.56
COL9A3-202ENST00000452372 PFDN4Q9NQP4 134 aa18.53■□□□□ 0.56
COL9A3-202ENST00000452372 EHD3Q9NZN3 535 aa18.53■□□□□ 0.56
COL9A3-202ENST00000452372 UTS2RQ9UKP6 389 aa18.53■□□□□ 0.56
COL9A3-202ENST00000452372 ZNF780BQ9Y6R6 833 aa18.53■□□□□ 0.56
COL9A3-202ENST00000452372 ITPR2Q14571 2701 aa18.52■□□□□ 0.56
COL9A3-202ENST00000452372 TRAV17A0A0B4J275 112 aa18.52■□□□□ 0.56
COL9A3-202ENST00000452372 GABRR3A8MPY1 467 aa18.52■□□□□ 0.56
COL9A3-202ENST00000452372 HRKO00198 91 aa18.52■□□□□ 0.56
COL9A3-202ENST00000452372 DDCP20711 480 aa18.52■□□□□ 0.56
COL9A3-202ENST00000452372 FEN1P39748 380 aaKnown RBP18.52■□□□□ 0.56
COL9A3-202ENST00000452372 CD96P40200 585 aa18.52■□□□□ 0.56
COL9A3-202ENST00000452372 RPL14P50914 215 aaKnown RBP18.52■□□□□ 0.56
COL9A3-202ENST00000452372 ERVK-8P63133 956 aa18.52■□□□□ 0.56
COL9A3-202ENST00000452372 TUBA3CQ13748 450 aa18.52■□□□□ 0.56
COL9A3-202ENST00000452372 GALNTL6Q49A17 601 aa18.52■□□□□ 0.56
COL9A3-202ENST00000452372 TUBA3EQ6PEY2 450 aa18.52■□□□□ 0.56
COL9A3-202ENST00000452372 IKBIPQ70UQ0 350 aa18.52■□□□□ 0.56
COL9A3-202ENST00000452372 OR5L2Q8NGL0 311 aa18.52■□□□□ 0.56
COL9A3-202ENST00000452372 RAB3IL1Q8TBN0 382 aa18.52■□□□□ 0.56
COL9A3-202ENST00000452372 DOK4Q8TEW6 326 aa18.52■□□□□ 0.56
COL9A3-202ENST00000452372 CNRIP1Q96F85 164 aaPredicted RBP18.52■□□□□ 0.56
COL9A3-202ENST00000452372 PPP3R2Q96LZ3 170 aa18.52■□□□□ 0.56
COL9A3-202ENST00000452372 C3orf30Q96M34 536 aa18.52■□□□□ 0.56
COL9A3-202ENST00000452372 CNPPD1Q9BV87 410 aa18.52■□□□□ 0.56
COL9A3-202ENST00000452372 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.52■□□□□ 0.562e-7■□□□□ 10.9
COL9A3-202ENST00000452372 ERVK-19Q9WJR5 959 aa18.52■□□□□ 0.56
COL9A3-202ENST00000452372 PCDHGA10Q9Y5H3 936 aa18.52■□□□□ 0.56
COL9A3-202ENST00000452372 SVILO95425 2214 aa18.51■□□□□ 0.55
COL9A3-202ENST00000452372 FCHO1O14526 889 aa18.51■□□□□ 0.55
COL9A3-202ENST00000452372 SKAP2O75563 359 aaPredicted RBP18.51■□□□□ 0.55
COL9A3-202ENST00000452372 SASH3O75995 380 aa18.51■□□□□ 0.55
COL9A3-202ENST00000452372 CBX6O95503 412 aa18.51■□□□□ 0.55
COL9A3-202ENST00000452372 ATP1B1P05026 303 aa18.51■□□□□ 0.55
COL9A3-202ENST00000452372 TACR1P25103 407 aa18.51■□□□□ 0.55
COL9A3-202ENST00000452372 TRHRP34981 398 aaPredicted RBP18.51■□□□□ 0.55
COL9A3-202ENST00000452372 RPL38P63173 70 aaKnown RBP18.51■□□□□ 0.55
COL9A3-202ENST00000452372 ATG16L1Q676U5 607 aa18.51■□□□□ 0.55
COL9A3-202ENST00000452372 TRIM42Q8IWZ5 723 aa18.51■□□□□ 0.55
COL9A3-202ENST00000452372 GALNT12Q8IXK2 581 aa18.51■□□□□ 0.55
COL9A3-202ENST00000452372 SAMD14Q8IZD0 417 aaPredicted RBP18.51■□□□□ 0.55
COL9A3-202ENST00000452372 CISD2Q8N5K1 135 aaKnown RBP18.51■□□□□ 0.55
COL9A3-202ENST00000452372 CDC26Q8NHZ8 85 aa18.51■□□□□ 0.55
COL9A3-202ENST00000452372 BARD1Q99728 777 aaKnown RBP18.51■□□□□ 0.55
COL9A3-202ENST00000452372 TRIM45Q9H8W5 580 aaPredicted RBP18.51■□□□□ 0.55
COL9A3-202ENST00000452372 ASF1BQ9NVP2 202 aa18.51■□□□□ 0.55
COL9A3-202ENST00000452372 TAS2R7Q9NYW3 318 aa18.51■□□□□ 0.55
COL9A3-202ENST00000452372 MYOTQ9UBF9 498 aa18.51■□□□□ 0.55
COL9A3-202ENST00000452372 YARS2Q9Y2Z4 477 aaKnown RBP18.51■□□□□ 0.55
COL9A3-202ENST00000452372 CACNA1DQ01668 2161 aa18.5■□□□□ 0.55
COL9A3-202ENST00000452372 ATP6AP2A0A1C7CYW4 349 aa18.5■□□□□ 0.55
COL9A3-202ENST00000452372 HMGB1P1B2RPK0 211 aaPredicted RBP18.5■□□□□ 0.55
COL9A3-202ENST00000452372 SNNO75324 88 aaPredicted RBP18.5■□□□□ 0.55
COL9A3-202ENST00000452372 ITGA10O75578 1167 aa18.5■□□□□ 0.55
COL9A3-202ENST00000452372 ATP6AP2O75787 350 aa18.5■□□□□ 0.55
COL9A3-202ENST00000452372 AGFG2O95081 481 aa18.5■□□□□ 0.55
COL9A3-202ENST00000452372 CT62P0C5K7 136 aa18.5■□□□□ 0.55
COL9A3-202ENST00000452372 NT5EP21589 574 aa18.5■□□□□ 0.55
COL9A3-202ENST00000452372 ST13P50502 369 aaKnown RBP18.5■□□□□ 0.55
COL9A3-202ENST00000452372 HLCSP50747 726 aa18.5■□□□□ 0.55
COL9A3-202ENST00000452372 MGAT2Q10469 447 aa18.5■□□□□ 0.55
COL9A3-202ENST00000452372 FUT7Q11130 342 aa18.5■□□□□ 0.55
COL9A3-202ENST00000452372 MAP4K2Q12851 820 aa18.5■□□□□ 0.55
COL9A3-202ENST00000452372 CEBPEQ15744 281 aa18.5■□□□□ 0.55
COL9A3-202ENST00000452372 PRICKLE4Q2TBC4 344 aa18.5■□□□□ 0.55
COL9A3-202ENST00000452372 C6orf136Q5SQH8 315 aa18.5■□□□□ 0.55
COL9A3-202ENST00000452372 ZNF468Q5VIY5 522 aaPredicted RBP18.5■□□□□ 0.55
COL9A3-202ENST00000452372 RPUSD3Q6P087 351 aaKnown RBP18.5■□□□□ 0.55
COL9A3-202ENST00000452372 FAM180BQ6P0A1 224 aa18.5■□□□□ 0.55
COL9A3-202ENST00000452372 RNF111Q6ZNA4 994 aa18.5■□□□□ 0.55
COL9A3-202ENST00000452372 LRRC25Q8N386 305 aaPredicted RBP18.5■□□□□ 0.55
COL9A3-202ENST00000452372 SUN3Q8TAQ9 357 aa18.5■□□□□ 0.55
COL9A3-202ENST00000452372 NUBPLQ8TB37 319 aa18.5■□□□□ 0.55
COL9A3-202ENST00000452372 EXOSC8Q96B26 276 aaKnown RBP18.5■□□□□ 0.55
COL9A3-202ENST00000452372 EGLN2Q96KS0 407 aa18.5■□□□□ 0.55
COL9A3-202ENST00000452372 MANSC1Q9H8J5 431 aa18.5■□□□□ 0.55
COL9A3-202ENST00000452372 LIN28AQ9H9Z2 209 aaKnown RBP18.5■□□□□ 0.55
COL9A3-202ENST00000452372 SLC35C2Q9NQQ7 365 aa18.5■□□□□ 0.55
COL9A3-202ENST00000452372 THAP1Q9NVV9 213 aa18.5■□□□□ 0.55
COL9A3-202ENST00000452372 ANKRD10Q9NXR5 420 aa18.5■□□□□ 0.55
COL9A3-202ENST00000452372 EXO1Q9UQ84 846 aaKnown RBP18.5■□□□□ 0.55
COL9A3-202ENST00000452372 NTNG1Q9Y2I2 539 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms