RNA–Protein interactions for RNA: ENST00000448874.5

PTMA-208, Transcript of prothymosin alpha, humanhuman

TSL 2

Gene PTMA, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-208ENST00000448874 C8orf74Q6P047 294 aa15.3■□□□□ 0.04
PTMA-208ENST00000448874 MED13LQ71F56 2210 aa15.3■□□□□ 0.04
PTMA-208ENST00000448874 TMEM200AQ86VY9 491 aa15.3■□□□□ 0.04
PTMA-208ENST00000448874 LIX1LQ8IVB5 337 aa15.3■□□□□ 0.04
PTMA-208ENST00000448874 CLYBLQ8N0X4 340 aa15.3■□□□□ 0.04
PTMA-208ENST00000448874 TAGAPQ8N103 731 aa15.3■□□□□ 0.04
PTMA-208ENST00000448874 PLD6Q8N2A8 252 aaKnown RBP15.3■□□□□ 0.04
PTMA-208ENST00000448874 LRRC25Q8N386 305 aaPredicted RBP15.3■□□□□ 0.04
PTMA-208ENST00000448874 PTGR2Q8N8N7 351 aaPredicted RBP15.3■□□□□ 0.04
PTMA-208ENST00000448874 ZNF441Q8N8Z8 693 aa15.3■□□□□ 0.04
PTMA-208ENST00000448874 DOHHQ9BU89 302 aa15.3■□□□□ 0.04
PTMA-208ENST00000448874 NOL11Q9H8H0 719 aaKnown RBP15.3■□□□□ 0.04
PTMA-208ENST00000448874 ZDHHC18Q9NUE0 388 aa15.3■□□□□ 0.04
PTMA-208ENST00000448874 TEX10Q9NXF1 929 aaPredicted RBP15.3■□□□□ 0.04
PTMA-208ENST00000448874 PSD3Q9NYI0 1048 aa15.3■□□□□ 0.04
PTMA-208ENST00000448874 B4GALT7Q9UBV7 327 aa15.3■□□□□ 0.04
PTMA-208ENST00000448874 C2CD3Q4AC94 2353 aa15.29■□□□□ 0.04
PTMA-208ENST00000448874 FREM3P0C091 2139 aa15.29■□□□□ 0.04
PTMA-208ENST00000448874 HIVEP1P15822 2718 aa15.29■□□□□ 0.04
PTMA-208ENST00000448874 OR7A17O14581 309 aa15.29■□□□□ 0.04
PTMA-208ENST00000448874 PGRMC2O15173 223 aa15.29■□□□□ 0.04
PTMA-208ENST00000448874 SEMA3DO95025 777 aa15.29■□□□□ 0.04
PTMA-208ENST00000448874 CLDN9O95484 217 aa15.29■□□□□ 0.04
PTMA-208ENST00000448874 GABRA1P14867 456 aa15.29■□□□□ 0.04
PTMA-208ENST00000448874 RIPPLY3P57055 190 aa15.29■□□□□ 0.04
PTMA-208ENST00000448874 METTL2BQ6P1Q9 378 aaKnown RBP15.29■□□□□ 0.04
PTMA-208ENST00000448874 TMEM64Q6YI46 380 aa15.29■□□□□ 0.04
PTMA-208ENST00000448874 WDR53Q7Z5U6 358 aaPredicted RBP15.29■□□□□ 0.04
PTMA-208ENST00000448874 LIX1Q8N485 282 aa15.29■□□□□ 0.04
PTMA-208ENST00000448874 OR52B6Q8NGF0 335 aa15.29■□□□□ 0.04
PTMA-208ENST00000448874 NEIL3Q8TAT5 605 aa15.29■□□□□ 0.04
PTMA-208ENST00000448874 DIO2Q92813 273 aa15.29■□□□□ 0.04
PTMA-208ENST00000448874 ATP6V1E2Q96A05 226 aa15.29■□□□□ 0.04
PTMA-208ENST00000448874 PHF21BQ96EK2 531 aa15.29■□□□□ 0.04
PTMA-208ENST00000448874 ZNF597Q96LX8 424 aa15.29■□□□□ 0.04
PTMA-208ENST00000448874 SERPINI1Q99574 410 aa15.29■□□□□ 0.04
PTMA-208ENST00000448874 ACKR4Q9NPB9 350 aa15.29■□□□□ 0.04
PTMA-208ENST00000448874 RYDENQ9NUL5 291 aaKnown RBP15.29■□□□□ 0.04
PTMA-208ENST00000448874 ZNF358Q9NW07 568 aa15.29■□□□□ 0.04
PTMA-208ENST00000448874 QPCTLQ9NXS2 382 aa15.29■□□□□ 0.04
PTMA-208ENST00000448874 NINJ2Q9NZG7 142 aa15.29■□□□□ 0.04
PTMA-208ENST00000448874 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.29■□□□□ 0.048e-7■■■□□ 19
PTMA-208ENST00000448874 SPG11Q96JI7 2443 aa15.28■□□□□ 0.04
PTMA-208ENST00000448874 CELSR1Q9NYQ6 3014 aa15.28■□□□□ 0.04
PTMA-208ENST00000448874 EXPH5Q8NEV8 1989 aa15.28■□□□□ 0.04
PTMA-208ENST00000448874 C2orf92A0A1B0GVN3 265 aa15.28■□□□□ 0.04
PTMA-208ENST00000448874 FAM47E-STBD1D6RA91 191 aa15.28■□□□□ 0.04
PTMA-208ENST00000448874 CT62P0C5K7 136 aa15.28■□□□□ 0.04
PTMA-208ENST00000448874 GDF1P27539 372 aa15.28■□□□□ 0.04
PTMA-208ENST00000448874 PIK3R1P27986 724 aa15.28■□□□□ 0.04
PTMA-208ENST00000448874 TRPC1P48995 793 aa15.28■□□□□ 0.04
PTMA-208ENST00000448874 CCNG1P51959 295 aa15.28■□□□□ 0.04
PTMA-208ENST00000448874 CKAP4Q07065 602 aaKnown RBP15.28■□□□□ 0.04
PTMA-208ENST00000448874 RPS6KA2Q15349 733 aa15.28■□□□□ 0.04
PTMA-208ENST00000448874 SLC25A35Q3KQZ1 300 aa15.28■□□□□ 0.04
PTMA-208ENST00000448874 TBCELQ5QJ74 424 aa15.28■□□□□ 0.04
PTMA-208ENST00000448874 RIPPLY2Q5TAB7 128 aa15.28■□□□□ 0.04
PTMA-208ENST00000448874 CES4AQ5XG92 561 aa15.28■□□□□ 0.04
PTMA-208ENST00000448874 SPNS3Q6ZMD2 512 aa15.28■□□□□ 0.04
PTMA-208ENST00000448874 GALNT12Q8IXK2 581 aa15.28■□□□□ 0.04
PTMA-208ENST00000448874 ULK2Q8IYT8 1036 aa15.28■□□□□ 0.04
PTMA-208ENST00000448874 LRRC1Q9BTT6 524 aa15.28■□□□□ 0.04
PTMA-208ENST00000448874 ACSS3Q9H6R3 686 aa15.28■□□□□ 0.04
PTMA-208ENST00000448874 CXorf21Q9HAI6 301 aa15.28■□□□□ 0.04
PTMA-208ENST00000448874 SLC24A3Q9HC58 644 aa15.28■□□□□ 0.04
PTMA-208ENST00000448874 CAPN14A8MX76 684 aa15.27■□□□□ 0.04
PTMA-208ENST00000448874 TP53I11O14683 189 aa15.27■□□□□ 0.04
PTMA-208ENST00000448874 TRIM3O75382 744 aaPredicted RBP15.27■□□□□ 0.04
PTMA-208ENST00000448874 ZWINTO95229 277 aa15.27■□□□□ 0.04
PTMA-208ENST00000448874 KLK1P06870 262 aa15.27■□□□□ 0.04
PTMA-208ENST00000448874 DLX5P56178 289 aa15.27■□□□□ 0.04
PTMA-208ENST00000448874 FBXW4P57775 412 aa15.27■□□□□ 0.04
PTMA-208ENST00000448874 HLA-DQA1Q5Y7H0 255 aa15.27■□□□□ 0.04
PTMA-208ENST00000448874 FRG2Q64ET8 278 aa15.27■□□□□ 0.04
PTMA-208ENST00000448874 TMEM198Q66K66 360 aa15.27■□□□□ 0.04
PTMA-208ENST00000448874 BICRALQ6AI39 1079 aa15.27■□□□□ 0.04
PTMA-208ENST00000448874 TTC19Q6DKK2 380 aaPredicted RBP15.27■□□□□ 0.04
PTMA-208ENST00000448874 TP53INP1Q96A56 240 aa15.27■□□□□ 0.04
PTMA-208ENST00000448874 NSUN5Q96P11 429 aaKnown RBP15.27■□□□□ 0.04
PTMA-208ENST00000448874 FRG2BQ96QU4 278 aa15.27■□□□□ 0.04
PTMA-208ENST00000448874 NTMT1Q9BV86 223 aa15.27■□□□□ 0.04
PTMA-208ENST00000448874 MRPL1Q9BYD6 325 aaKnown RBP15.27■□□□□ 0.04
PTMA-208ENST00000448874 XPR1Q9UBH6 696 aa15.27■□□□□ 0.04
PTMA-208ENST00000448874 PCTPQ9UKL6 214 aa15.27■□□□□ 0.04
PTMA-208ENST00000448874 L3MBTL1Q9Y468 752 aa15.27■□□□□ 0.04
PTMA-208ENST00000448874 PCDHGB3Q9Y5G1 929 aa15.27■□□□□ 0.04
PTMA-208ENST00000448874 C15orf38-AP3S2A0A0A6YYH1 394 aa15.26■□□□□ 0.03
PTMA-208ENST00000448874 ANKRD33BA6NCL7 494 aa15.26■□□□□ 0.03
PTMA-208ENST00000448874 STX16-NPEPL1H3BU86 382 aa15.26■□□□□ 0.03
PTMA-208ENST00000448874 STX16O14662 325 aa15.26■□□□□ 0.03
PTMA-208ENST00000448874 INHBAP08476 426 aa15.26■□□□□ 0.03
PTMA-208ENST00000448874 RBP1P09455 135 aa15.26■□□□□ 0.03
PTMA-208ENST00000448874 NT5EP21589 574 aa15.26■□□□□ 0.03
PTMA-208ENST00000448874 MAGEA12P43365 314 aa15.26■□□□□ 0.03
PTMA-208ENST00000448874 FUT7Q11130 342 aa15.26■□□□□ 0.03
PTMA-208ENST00000448874 TRAF3Q13114 568 aa15.26■□□□□ 0.03
PTMA-208ENST00000448874 DUSP8Q13202 625 aa15.26■□□□□ 0.03
PTMA-208ENST00000448874 C6orf163Q5TEZ5 329 aa15.26■□□□□ 0.03
PTMA-208ENST00000448874 SEM1Q6ZVN7 128 aa15.26■□□□□ 0.03
PTMA-208ENST00000448874 ZNF615Q8N8J6 731 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms