RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 ERVK-19Q9WJR5 959 aa12.19□□□□□ -0.46
ERGIC3-209ENST00000447986 CDK2AP1O14519 115 aa12.18□□□□□ -0.46
ERGIC3-209ENST00000447986 AKAP10O43572 662 aa12.18□□□□□ -0.46
ERGIC3-209ENST00000447986 LRATO95237 230 aa12.18□□□□□ -0.46
ERGIC3-209ENST00000447986 TGDSO95455 350 aa12.18□□□□□ -0.46
ERGIC3-209ENST00000447986 DDAH2O95865 285 aa12.18□□□□□ -0.46
ERGIC3-209ENST00000447986 PRPS1L1P21108 318 aa12.18□□□□□ -0.46
ERGIC3-209ENST00000447986 CASRP41180 1078 aa12.18□□□□□ -0.46
ERGIC3-209ENST00000447986 GPR143P51810 404 aa12.18□□□□□ -0.46
ERGIC3-209ENST00000447986 ARG2P78540 354 aa12.18□□□□□ -0.46
ERGIC3-209ENST00000447986 ZNF750Q32MQ0 723 aa12.18□□□□□ -0.46
ERGIC3-209ENST00000447986 ACER2Q5QJU3 275 aa12.18□□□□□ -0.46
ERGIC3-209ENST00000447986 B3GNTL1Q67FW5 361 aaPredicted RBP12.18□□□□□ -0.46
ERGIC3-209ENST00000447986 NXNQ6DKJ4 435 aa12.18□□□□□ -0.46
ERGIC3-209ENST00000447986 IGFL2Q6UWQ7 119 aa12.18□□□□□ -0.46
ERGIC3-209ENST00000447986 RNF111Q6ZNA4 994 aa12.18□□□□□ -0.46
ERGIC3-209ENST00000447986 FAM47EQ6ZV65 393 aa12.18□□□□□ -0.46
ERGIC3-209ENST00000447986 LARP4Q71RC2 724 aaKnown RBP eCLIP12.18□□□□□ -0.463e-7■■□□□ 13.8
ERGIC3-209ENST00000447986 SLC29A4Q7RTT9 530 aa12.18□□□□□ -0.46
ERGIC3-209ENST00000447986 CCDC116Q8IYX3 515 aa12.18□□□□□ -0.46
ERGIC3-209ENST00000447986 VWA5B2Q8N398 1253 aa12.18□□□□□ -0.46
ERGIC3-209ENST00000447986 NATD1Q8N6N6 113 aa12.18□□□□□ -0.46
ERGIC3-209ENST00000447986 ZNF721Q8TF20 911 aa12.18□□□□□ -0.46
ERGIC3-209ENST00000447986 ZNF681Q96N22 645 aa12.18□□□□□ -0.46
ERGIC3-209ENST00000447986 CDCP1Q9H5V8 836 aa12.18□□□□□ -0.46
ERGIC3-209ENST00000447986 ATAD3AQ9NVI7 634 aa12.18□□□□□ -0.46
ERGIC3-209ENST00000447986 SH3BP4Q9P0V3 963 aa12.18□□□□□ -0.46
ERGIC3-209ENST00000447986 USH1CQ9Y6N9 552 aa12.18□□□□□ -0.46
ERGIC3-209ENST00000447986 SCN2AQ99250 2005 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 GOLGA8QA0A0J9YX86 632 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 A0A1W2PS29 197 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 GOLGA8OA6NCC3 632 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 OR6C76A6NM76 312 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 GOLGA8NF8WBI6 632 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 K7EM74 188 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 SDHDO14521 159 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 PDPK1O15530 556 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 TBX19O60806 448 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 DIAPH2O60879 1101 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 BCAS2O75934 225 aaPredicted RBP12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 SLITRK5O94991 958 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 PDGFAP04085 211 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 IGKV3-11P04433 115 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 G6PDP11413 515 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 EPHA3P29320 983 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 NCBP2P52298 156 aaKnown RBP eCLIP12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 RNF4P78317 190 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 MAP4K2Q12851 820 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 KLRB1Q12918 225 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 NFATC3Q12968 1075 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 PTGR1Q14914 329 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 CEBPEQ15744 281 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 PRICKLE4Q2TBC4 344 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 OGFOD2Q6N063 350 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 FAM180BQ6P0A1 224 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 DGAT2L6Q6ZPD8 337 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 ACAD11Q709F0 780 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 SPATA19Q7Z5L4 167 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 OR7G1Q8NGA0 311 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 CEP70Q8NHQ1 597 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 ZFP28Q8NHY6 868 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 SUN3Q8TAQ9 357 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 ZBED6CLQ96FA7 236 aaPredicted RBP12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 RNF32Q9H0A6 362 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 WDR55Q9H6Y2 383 aaPredicted RBP12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 CFL2Q9Y281 166 aa12.17□□□□□ -0.46
ERGIC3-209ENST00000447986 MYO1GB0I1T2 1018 aa12.16□□□□□ -0.46
ERGIC3-209ENST00000447986 TCP11X1B4DZS4 312 aa12.16□□□□□ -0.46
ERGIC3-209ENST00000447986 SCAMP2O15127 329 aaKnown RBP12.16□□□□□ -0.46
ERGIC3-209ENST00000447986 CLDN8P56748 225 aa12.16□□□□□ -0.46
ERGIC3-209ENST00000447986 PDE7AQ13946 482 aa12.16□□□□□ -0.46
ERGIC3-209ENST00000447986 SOWAHCQ53LP3 525 aaPredicted RBP12.16□□□□□ -0.46
ERGIC3-209ENST00000447986 HLA-DQA1Q5Y7H0 255 aa12.16□□□□□ -0.46
ERGIC3-209ENST00000447986 FCRLBQ6BAA4 426 aa12.16□□□□□ -0.46
ERGIC3-209ENST00000447986 RETREG3Q86VR2 466 aa12.16□□□□□ -0.46
ERGIC3-209ENST00000447986 HORMAD2Q8N7B1 307 aa12.16□□□□□ -0.46
ERGIC3-209ENST00000447986 NUBPLQ8TB37 319 aa12.16□□□□□ -0.46
ERGIC3-209ENST00000447986 ZNF675Q8TD23 568 aa12.16□□□□□ -0.46
ERGIC3-209ENST00000447986 ACTRT2Q8TDY3 377 aa12.16□□□□□ -0.46
ERGIC3-209ENST00000447986 THAP3Q8WTV1 239 aaPredicted RBP12.16□□□□□ -0.46
ERGIC3-209ENST00000447986 HAS2Q92819 552 aa12.16□□□□□ -0.46
ERGIC3-209ENST00000447986 ERP27Q96DN0 273 aa12.16□□□□□ -0.46
ERGIC3-209ENST00000447986 MAELQ96JY0 434 aaKnown RBP12.16□□□□□ -0.46
ERGIC3-209ENST00000447986 BBC3Q96PG8 261 aaPredicted RBP12.16□□□□□ -0.46
ERGIC3-209ENST00000447986 UTP23Q9BRU9 249 aaKnown RBP12.16□□□□□ -0.46
ERGIC3-209ENST00000447986 ANAPC2Q9UJX6 822 aa12.16□□□□□ -0.46
ERGIC3-209ENST00000447986 ZNF223Q9UK11 482 aaPredicted RBP12.16□□□□□ -0.46
ERGIC3-209ENST00000447986 EXO1Q9UQ84 846 aaKnown RBP12.16□□□□□ -0.46
ERGIC3-209ENST00000447986 LOC400499M0QZD8 3231 aa12.16□□□□□ -0.46
ERGIC3-209ENST00000447986 OR5H15A6NDH6 313 aa12.15□□□□□ -0.46
ERGIC3-209ENST00000447986 GABRR3A8MPY1 467 aa12.15□□□□□ -0.46
ERGIC3-209ENST00000447986 POLR3GO15318 223 aaPredicted RBP12.15□□□□□ -0.46
ERGIC3-209ENST00000447986 DIO3P55073 304 aa12.15□□□□□ -0.46
ERGIC3-209ENST00000447986 SLC37A1P57057 533 aa12.15□□□□□ -0.46
ERGIC3-209ENST00000447986 MLF1P58340 268 aa12.15□□□□□ -0.46
ERGIC3-209ENST00000447986 FUT7Q11130 342 aa12.15□□□□□ -0.46
ERGIC3-209ENST00000447986 RPS6KA2Q15349 733 aa12.15□□□□□ -0.46
ERGIC3-209ENST00000447986 TLR1Q15399 786 aa12.15□□□□□ -0.46
ERGIC3-209ENST00000447986 CPTPQ5TA50 214 aa12.15□□□□□ -0.46
ERGIC3-209ENST00000447986 BEST3Q8N1M1 668 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms