RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 COLEC12Q5KU26 742 aa18.4■□□□□ 0.54
FAM3A-215ENST00000447601 XAF1Q6GPH4 301 aa18.4■□□□□ 0.54
FAM3A-215ENST00000447601 PARGQ86W56 976 aa18.4■□□□□ 0.54
FAM3A-215ENST00000447601 RBM12BQ8IXT5 1001 aaKnown RBP18.4■□□□□ 0.54
FAM3A-215ENST00000447601 KLHDC7BQ96G42 594 aa18.4■□□□□ 0.54
FAM3A-215ENST00000447601 SMIM10Q96HG1 83 aa18.4■□□□□ 0.54
FAM3A-215ENST00000447601 GAS2L1Q99501 681 aaPredicted RBP18.4■□□□□ 0.54
FAM3A-215ENST00000447601 BCL2L10Q9HD36 194 aa18.4■□□□□ 0.54
FAM3A-215ENST00000447601 PRDM9Q9NQV7 894 aa18.4■□□□□ 0.54
FAM3A-215ENST00000447601 ENOPH1Q9UHY7 261 aa18.4■□□□□ 0.54
FAM3A-215ENST00000447601 A0A0J9YY10 115 aa18.39■□□□□ 0.54
FAM3A-215ENST00000447601 PRAMEF27A3QJZ7 478 aa18.39■□□□□ 0.54
FAM3A-215ENST00000447601 P2RX6O15547 441 aa18.39■□□□□ 0.54
FAM3A-215ENST00000447601 B3GALT2O43825 422 aa18.39■□□□□ 0.54
FAM3A-215ENST00000447601 HTR1AP08908 422 aa18.39■□□□□ 0.54
FAM3A-215ENST00000447601 ALPPL2P10696 532 aa18.39■□□□□ 0.54
FAM3A-215ENST00000447601 CPN2P22792 545 aa18.39■□□□□ 0.54
FAM3A-215ENST00000447601 PCSK6P29122 969 aa18.39■□□□□ 0.54
FAM3A-215ENST00000447601 GANABQ14697 944 aaKnown RBP18.39■□□□□ 0.54
FAM3A-215ENST00000447601 LASP1Q14847 261 aaKnown RBP18.39■□□□□ 0.54
FAM3A-215ENST00000447601 PROX2Q3B8N5 592 aa18.39■□□□□ 0.54
FAM3A-215ENST00000447601 TAGAPQ8N103 731 aa18.39■□□□□ 0.54
FAM3A-215ENST00000447601 ZNF655Q8N720 491 aaPredicted RBP18.39■□□□□ 0.54
FAM3A-215ENST00000447601 BAHD1Q8TBE0 780 aaPredicted RBP18.39■□□□□ 0.54
FAM3A-215ENST00000447601 ZCCHC10Q8TBK6 192 aa18.39■□□□□ 0.54
FAM3A-215ENST00000447601 SGCDQ92629 289 aa18.39■□□□□ 0.54
FAM3A-215ENST00000447601 RSC1A1Q92681 617 aa18.39■□□□□ 0.54
FAM3A-215ENST00000447601 PRO3102Q9H379 93 aa18.39■□□□□ 0.54
FAM3A-215ENST00000447601 LMAN1LQ9HAT1 526 aa18.39■□□□□ 0.54
FAM3A-215ENST00000447601 HRASLS2Q9NWW9 162 aa18.39■□□□□ 0.54
FAM3A-215ENST00000447601 TMEM9Q9P0T7 183 aa18.39■□□□□ 0.54
FAM3A-215ENST00000447601 CDC14AQ9UNH5 594 aa18.39■□□□□ 0.54
FAM3A-215ENST00000447601 BRWD1Q9NSI6 2320 aa18.39■□□□□ 0.54
FAM3A-215ENST00000447601 PTGES3LE9PB15 166 aa18.39■□□□□ 0.53
FAM3A-215ENST00000447601 ZSCAN9O15535 394 aaPredicted RBP18.39■□□□□ 0.53
FAM3A-215ENST00000447601 NOL3O60936 208 aaKnown RBP18.39■□□□□ 0.53
FAM3A-215ENST00000447601 SEC14L2O76054 403 aa18.39■□□□□ 0.53
FAM3A-215ENST00000447601 CELA2BP08218 269 aaPredicted RBP18.39■□□□□ 0.53
FAM3A-215ENST00000447601 TLX1P31314 330 aaPredicted RBP18.39■□□□□ 0.53
FAM3A-215ENST00000447601 DEFB134Q4QY38 66 aa18.39■□□□□ 0.53
FAM3A-215ENST00000447601 GPR107Q5VW38 600 aa18.39■□□□□ 0.53
FAM3A-215ENST00000447601 PRAMEF8Q5VWM4 474 aa18.39■□□□□ 0.53
FAM3A-215ENST00000447601 PRAMEF7Q5VXH5 474 aa18.39■□□□□ 0.53
FAM3A-215ENST00000447601 GPR153Q6NV75 609 aa18.39■□□□□ 0.53
FAM3A-215ENST00000447601 ZNF687Q8N1G0 1237 aa18.39■□□□□ 0.53
FAM3A-215ENST00000447601 OR9A2Q8NGT5 310 aa18.39■□□□□ 0.53
FAM3A-215ENST00000447601 C12orf43Q96C57 262 aaKnown RBP18.39■□□□□ 0.53
FAM3A-215ENST00000447601 ELP4Q96EB1 424 aa18.39■□□□□ 0.53
FAM3A-215ENST00000447601 C10orf90Q96M02 699 aa18.39■□□□□ 0.53
FAM3A-215ENST00000447601 ALPK1Q96QP1 1244 aa18.39■□□□□ 0.53
FAM3A-215ENST00000447601 DOK1Q99704 481 aa18.39■□□□□ 0.53
FAM3A-215ENST00000447601 BTBD2Q9BX70 525 aa18.39■□□□□ 0.53
FAM3A-215ENST00000447601 RLIMQ9NVW2 624 aa18.39■□□□□ 0.53
FAM3A-215ENST00000447601 PAK1IP1Q9NWT1 392 aaPredicted RBP18.39■□□□□ 0.53
FAM3A-215ENST00000447601 MS4A12Q9NXJ0 267 aa18.39■□□□□ 0.53
FAM3A-215ENST00000447601 PCDH17O14917 1159 aa18.38■□□□□ 0.53
FAM3A-215ENST00000447601 ASNA1O43681 348 aa18.38■□□□□ 0.53
FAM3A-215ENST00000447601 XPNPEP2O43895 674 aa18.38■□□□□ 0.53
FAM3A-215ENST00000447601 FMO3P31513 532 aa18.38■□□□□ 0.53
FAM3A-215ENST00000447601 PTGER1P34995 402 aa18.38■□□□□ 0.53
FAM3A-215ENST00000447601 GGT2P36268 569 aa18.38■□□□□ 0.53
FAM3A-215ENST00000447601 MC3RP41968 323 aa18.38■□□□□ 0.53
FAM3A-215ENST00000447601 LIM2P55344 173 aa18.38■□□□□ 0.53
FAM3A-215ENST00000447601 LRIT3Q3SXY7 679 aa18.38■□□□□ 0.53
FAM3A-215ENST00000447601 RNF44Q7L0R7 432 aa18.38■□□□□ 0.53
FAM3A-215ENST00000447601 DGLUCYQ7Z3D6 616 aa18.38■□□□□ 0.53
FAM3A-215ENST00000447601 OOSP2Q86WS3 158 aa18.38■□□□□ 0.53
FAM3A-215ENST00000447601 CCDC71Q8IV32 467 aaPredicted RBP18.38■□□□□ 0.53
FAM3A-215ENST00000447601 LRRC25Q8N386 305 aaPredicted RBP18.38■□□□□ 0.53
FAM3A-215ENST00000447601 FRMD1Q8N878 549 aa18.38■□□□□ 0.53
FAM3A-215ENST00000447601 NUP43Q8NFH3 380 aa18.38■□□□□ 0.53
FAM3A-215ENST00000447601 OR9Q2Q8NGE9 314 aa18.38■□□□□ 0.53
FAM3A-215ENST00000447601 KLHL6Q8WZ60 621 aa18.38■□□□□ 0.53
FAM3A-215ENST00000447601 NIPSNAP1Q9BPW8 284 aa18.38■□□□□ 0.53
FAM3A-215ENST00000447601 KLHL25Q9H0H3 589 aa18.38■□□□□ 0.53
FAM3A-215ENST00000447601 CCNB1IP1Q9NPC3 277 aa18.38■□□□□ 0.53
FAM3A-215ENST00000447601 KCMF1Q9P0J7 381 aa18.38■□□□□ 0.53
FAM3A-215ENST00000447601 PCDHGA6Q9Y5G7 932 aa18.38■□□□□ 0.53
FAM3A-215ENST00000447601 A0A0G2JPF8 293 aa18.37■□□□□ 0.53
FAM3A-215ENST00000447601 A0A1W2PS29 197 aa18.37■□□□□ 0.53
FAM3A-215ENST00000447601 HNRNPCL2B2RXH8 293 aa18.37■□□□□ 0.53
FAM3A-215ENST00000447601 HNRNPCL3B7ZW38 293 aa18.37■□□□□ 0.53
FAM3A-215ENST00000447601 NDUFS2O75306 463 aa18.37■□□□□ 0.53
FAM3A-215ENST00000447601 HNRNPCL4P0DMR1 293 aa18.37■□□□□ 0.53
FAM3A-215ENST00000447601 ITIH1P19827 911 aa18.37■□□□□ 0.53
FAM3A-215ENST00000447601 SMIM11AP58511 58 aa18.37■□□□□ 0.53
FAM3A-215ENST00000447601 CSNK2BP67870 215 aa18.37■□□□□ 0.53
FAM3A-215ENST00000447601 HHEXQ03014 270 aa18.37■□□□□ 0.53
FAM3A-215ENST00000447601 SMAD2Q15796 467 aaKnown RBP18.37■□□□□ 0.53
FAM3A-215ENST00000447601 MANEAQ5SRI9 462 aa18.37■□□□□ 0.53
FAM3A-215ENST00000447601 FRMPD2BQ6IN97 320 aa18.37■□□□□ 0.53
FAM3A-215ENST00000447601 PARP8Q8N3A8 854 aa18.37■□□□□ 0.53
FAM3A-215ENST00000447601 ORAI3Q9BRQ5 295 aa18.37■□□□□ 0.53
FAM3A-215ENST00000447601 YIPF4Q9BSR8 244 aa18.37■□□□□ 0.53
FAM3A-215ENST00000447601 CCDC90BQ9GZT6 254 aa18.37■□□□□ 0.53
FAM3A-215ENST00000447601 DUSP21Q9H596 190 aa18.37■□□□□ 0.53
FAM3A-215ENST00000447601 EVA1BQ9NVM1 165 aa18.37■□□□□ 0.53
FAM3A-215ENST00000447601 C2orf42Q9NWW7 574 aa18.37■□□□□ 0.53
FAM3A-215ENST00000447601 TMCC3Q9ULS5 477 aa18.37■□□□□ 0.53
FAM3A-215ENST00000447601 CA14Q9ULX7 337 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms