RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 TNPO3Q9Y5L0 923 aaKnown RBP4.5□□□□□ -1.69
PTPN4-206ENST00000441089 PTGDR2Q9Y5Y4 395 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 USH1CQ9Y6N9 552 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 X6R8D5 127 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 DYSFO75923 2080 aa4.5□□□□□ -1.69
PTPN4-206ENST00000441089 PHF3Q92576 2039 aaKnown RBP4.5□□□□□ -1.69
PTPN4-206ENST00000441089 USF3Q68DE3 2245 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 IGKV1-8A0A0C4DH67 115 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 LILRA5A6NI73 299 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 E7EQ34 232 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 MATN2O00339 956 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 BTN3A3O00478 584 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 SDHDO14521 159 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 NRP2O60462 931 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 SLC19A2O60779 497 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 SKAP2O75563 359 aaPredicted RBP4.49□□□□□ -1.69
PTPN4-206ENST00000441089 TGDSO95455 350 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 ESRRBO95718 433 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 CRYABP02511 175 aaKnown RBP4.49□□□□□ -1.69
PTPN4-206ENST00000441089 NPPBP16860 134 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 XRCC1P18887 633 aaPredicted RBP4.49□□□□□ -1.69
PTPN4-206ENST00000441089 FPR2P25090 351 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 SERPINB3P29508 390 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 HALP42357 657 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 PIK3CGP48736 1102 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 HNMTP50135 292 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 RPL14P50914 215 aaKnown RBP4.49□□□□□ -1.69
PTPN4-206ENST00000441089 RAB28P51157 221 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 PKNOX1P55347 436 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 GFRA1P56159 465 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 ACY1Q03154 408 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 BTKQ06187 659 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 ASPHQ12797 758 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 LCP2Q13094 533 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 PRKAA1Q13131 559 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 E2F2Q14209 437 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 GPR18Q14330 331 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 ARHGAP19Q14CB8 494 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 SLC9B1Q4ZJI4 515 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 CATSPEREQ5SY80 951 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 AGAP7PQ5VUJ5 663 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 SHEQ5VZ18 495 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 KANK2Q63ZY3 851 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 ADNP2Q6IQ32 1131 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 PWWP2BQ6NUJ5 590 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 METTL2BQ6P1Q9 378 aaKnown RBP4.49□□□□□ -1.69
PTPN4-206ENST00000441089 SCIMPQ6UWF3 145 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 IGFL2Q6UWQ7 119 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 GPRIN3Q6ZVF9 776 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 SPATA21Q7Z572 469 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 PRSS42Q7Z5A4 293 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 CPLX4Q7Z7G2 160 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 MRGPREQ86SM8 312 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 SLC9B2Q86UD5 537 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 THOC6Q86W42 341 aaKnown RBP4.49□□□□□ -1.69
PTPN4-206ENST00000441089 CRLF3Q8IUI8 442 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 CCDC103Q8IW40 242 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 SYTL1Q8IYJ3 562 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 ADGRF3Q8IZF5 1079 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 EID3Q8N140 333 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 CDYL2Q8N8U2 506 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 SNX31Q8N9S9 440 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 OR4F6Q8NGB9 312 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 OR4E2Q8NGC2 313 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 OR2L8Q8NGY9 312 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 OR8K5Q8NH50 307 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 FLVCR1-AS1Q8TAF5 88 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 HMGCLL1Q8TB92 370 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 BCAS4Q8TDM0 211 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 ATL1Q8WXF7 558 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 NEIL2Q969S2 332 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 RAD51AP1Q96B01 352 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 ZBTB8AQ96BR9 441 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 CXorf40BQ96DE9 158 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 MAELQ96JY0 434 aaKnown RBP4.49□□□□□ -1.69
PTPN4-206ENST00000441089 PPP1R36Q96LQ0 422 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 C3orf30Q96M34 536 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 LRFN5Q96NI6 719 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 AGAP4Q96P64 663 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 GBP5Q96PP8 586 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 ZNF382Q96SR6 550 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 TRMOQ9BU70 441 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 NTMT1Q9BV86 223 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 TMEM120AQ9BXJ8 343 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 POLDIP3Q9BY77 421 aaKnown RBP4.49□□□□□ -1.69
PTPN4-206ENST00000441089 CHST8Q9H2A9 424 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 MVB12BQ9H7P6 319 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 IPPKQ9H8X2 491 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 SYNPO2LQ9H987 977 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 AKIRIN1Q9H9L7 192 aaPredicted RBP4.49□□□□□ -1.69
PTPN4-206ENST00000441089 SLC40A1Q9NP59 571 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 ABCF3Q9NUQ8 709 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 POT1Q9NUX5 634 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 COQ3Q9NZJ6 369 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 GIMAP2Q9UG22 337 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 PLEKHA6Q9Y2H5 1048 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 RNF11Q9Y3C5 154 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 FIS1Q9Y3D6 152 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 TSC22D4Q9Y3Q8 395 aa4.49□□□□□ -1.69
PTPN4-206ENST00000441089 TRAF6Q9Y4K3 522 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms