RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 CHAF1BQ13112 559 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 RPA4Q13156 261 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 SELPLGQ14242 412 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 SF1Q15637 639 aaKnown RBP4.51□□□□□ -1.69
EDEM3-203ENST00000439962 ZNF658BQ4V348 819 aaPredicted RBP4.51□□□□□ -1.69
EDEM3-203ENST00000439962 FAHD1Q6P587 224 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 STK32CQ86UX6 486 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 IFNEQ86WN2 208 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 SPACA3Q8IXA5 215 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 DCBLD1Q8N8Z6 715 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 OR10A6Q8NH74 314 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 WDR36Q8NI36 951 aaKnown RBP4.51□□□□□ -1.69
EDEM3-203ENST00000439962 ESAMQ96AP7 390 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 ITPKCQ96DU7 683 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 DACH2Q96NX9 599 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 CDK15Q96Q40 435 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 WDR12Q9GZL7 423 aaKnown RBP4.51□□□□□ -1.69
EDEM3-203ENST00000439962 ATG10Q9H0Y0 220 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 TOR3AQ9H497 397 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 DUSP21Q9H596 190 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 SCN3BQ9NY72 215 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 DHCR7Q9UBM7 475 aaKnown RBP4.51□□□□□ -1.69
EDEM3-203ENST00000439962 LHX6Q9UPM6 363 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 NAV2Q8IVL1 2488 aa4.51□□□□□ -1.69
EDEM3-203ENST00000439962 DOPEY2Q9Y3R5 2298 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 A6NL46 340 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 MAGEB17A8MXT2 336 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 C9orf172C9J069 976 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 ADAMDEC1O15204 470 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 SCN2BO60939 215 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 PRKD3O94806 890 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 SEMA3DO95025 777 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 FABP3P05413 133 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 GNAO1P09471 354 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 ETS2P15036 469 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 EFNA1P20827 205 aaPredicted RBP4.5□□□□□ -1.69
EDEM3-203ENST00000439962 MAGP20916 626 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 ARL1P40616 181 aaPredicted RBP4.5□□□□□ -1.69
EDEM3-203ENST00000439962 SERPINB10P48595 397 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 DGKQP52824 942 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 MEF2AQ02078 507 aaPredicted RBP4.5□□□□□ -1.69
EDEM3-203ENST00000439962 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.5□□□□□ -1.69
EDEM3-203ENST00000439962 PMS2P3Q13401 168 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 PDE7AQ13946 482 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 ARHGAP19Q14CB8 494 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 TMEM164Q5U3C3 297 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 METRNLQ641Q3 311 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 XAF1Q6GPH4 301 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 Q6ZNX1 250 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 ZZZ3Q8IYH5 903 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 SYTL1Q8IYJ3 562 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 SPARTQ8N0X7 666 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 GALNT6Q8NCL4 622 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 AGBL5Q8NDL9 886 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 OR2L2Q8NH16 312 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 FAM174AQ8TBP5 190 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 FIG4Q92562 907 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 FBXL20Q96IG2 436 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 MUS81Q96NY9 551 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 SEPHS2Q99611 448 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 MYNNQ9NPC7 610 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 ZNF71Q9NQZ8 489 aaPredicted RBP4.5□□□□□ -1.69
EDEM3-203ENST00000439962 FAIMQ9NVQ4 179 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 PAK1IP1Q9NWT1 392 aaPredicted RBP4.5□□□□□ -1.69
EDEM3-203ENST00000439962 ADPRHL2Q9NX46 363 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 THUMPD1Q9NXG2 353 aaKnown RBP4.5□□□□□ -1.69
EDEM3-203ENST00000439962 SLAMF8Q9P0V8 285 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 LUZP4Q9P127 313 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 ENPP5Q9UJA9 477 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 BAG5Q9UL15 447 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 VPS4AQ9UN37 437 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 ICKQ9UPZ9 632 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 PCDHGA1Q9Y5H4 931 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 MAU2Q9Y6X3 613 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 A0A0J9YVX5 310 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 C1orf226A1L170 272 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 CLDN24A6NM45 220 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 TMEM150CB9EJG8 249 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 CLIC1O00299 241 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 SLC1A7O00341 560 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 BCKDKO14874 412 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 NKX2-8O15522 239 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 MPZL2O60487 215 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 GABARAPO95166 117 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 ZIC2O95409 532 aaPredicted RBP4.5□□□□□ -1.69
EDEM3-203ENST00000439962 SERPINA1P01009 418 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 FAM87AP0C7U9 286 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 ANXA8P13928 327 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 ST6GAL1P15907 406 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 WT1P19544 449 aaPredicted RBP4.5□□□□□ -1.69
EDEM3-203ENST00000439962 PCSK6P29122 969 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 KDELR2P33947 212 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 UGT2B10P36537 528 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 ALDH9A1P49189 494 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 IRF8Q02556 426 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 NFATC3Q12968 1075 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 PTGR1Q14914 329 aa4.5□□□□□ -1.69
EDEM3-203ENST00000439962 HIST2H2ACQ16777 129 aaPredicted RBP4.5□□□□□ -1.69
EDEM3-203ENST00000439962 SYT6Q5T7P8 510 aaPredicted RBP4.5□□□□□ -1.69
EDEM3-203ENST00000439962 FAM219BQ5XKK7 198 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms