RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 LRRC17Q8N6Y2 441 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 PROKR2Q8NFJ6 384 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 HHIPQ96QV1 700 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 OR4K3Q96R72 315 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 ATF6BQ99941 703 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 ZC4H2Q9NQZ6 224 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 SEMA3GQ9NS98 782 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 KCTD5Q9NXV2 234 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 SPATA2Q9UM82 520 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 CLCA2Q9UQC9 943 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 RUVBL1Q9Y265 456 aaKnown RBP12.7□□□□□ -0.38
ACTN1-204ENST00000438964 PPP2R3BQ9Y5P8 575 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 KCNE2Q9Y6J6 123 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 A0A0B4J203 849 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 SYNDIG1LA6NDD5 238 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 FRS3O43559 492 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 HYAL3O43820 417 aaPredicted RBP12.7□□□□□ -0.38
ACTN1-204ENST00000438964 CD3GP09693 182 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 CD9P21926 228 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 ELAVL4P26378 380 aaKnown RBP12.7□□□□□ -0.38
ACTN1-204ENST00000438964 ATP5C1P36542 298 aaKnown RBP12.7□□□□□ -0.38
ACTN1-204ENST00000438964 GRM7Q14831 915 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 ADGRD2Q7Z7M1 963 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 FAM181AQ8N9Y4 354 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 ZNF740Q8NDX6 193 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 NLGN2Q8NFZ4 835 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 SMAP2Q8WU79 429 aaPredicted RBP12.7□□□□□ -0.38
ACTN1-204ENST00000438964 UBTD2Q8WUN7 234 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 DNAJA4Q8WW22 397 aaPredicted RBP12.7□□□□□ -0.38
ACTN1-204ENST00000438964 FBXW5Q969U6 566 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 MARVELD1Q9BSK0 173 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 TTTY10Q9BZA0 68 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 MCOLN1Q9GZU1 580 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 MCCC2Q9HCC0 563 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 C1GALT1Q9NS00 363 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 HCN2Q9UL51 889 aa12.7□□□□□ -0.38
ACTN1-204ENST00000438964 ZFR2Q9UPR6 939 aaKnown RBP12.7□□□□□ -0.38
ACTN1-204ENST00000438964 RTCAO00442 366 aaKnown RBP12.69□□□□□ -0.38
ACTN1-204ENST00000438964 COCHO43405 550 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 GATBO75879 557 aaKnown RBP12.69□□□□□ -0.38
ACTN1-204ENST00000438964 KLK1P06870 262 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 VIPR1P32241 457 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.69□□□□□ -0.38
ACTN1-204ENST00000438964 RAET1GQ6H3X3 334 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 TCTN3Q6NUS6 607 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 WASH2PQ6VEQ5 465 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 PLEKHH3Q7Z736 793 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 SYT9Q86SS6 491 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 IQCHQ86VS3 1027 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 ZNF366Q8N895 744 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 GPR32P1Q8NGA4 272 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 GCDHQ92947 438 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-204ENST00000438964 RNFT2Q96EX2 444 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 LINC00052Q96N35 136 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 ZFP3Q96NJ6 502 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 TMEM245Q9H330 911 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 CLEC4EQ9ULY5 219 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 HNRNPCL2B2RXH8 293 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 ADAM12O43184 909 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 ACADMP11310 421 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 NAGAP17050 411 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 XPAP23025 273 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-204ENST00000438964 PXNP49023 591 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-204ENST00000438964 OR10A3P58181 314 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 HSPB3Q12988 150 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 KIAA0907Q7Z7F0 614 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-204ENST00000438964 L3MBTL4Q8NA19 623 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 OR7G3Q8NG95 312 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 C12orf66Q96MD2 445 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 YIPF4Q9BSR8 244 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 KCNK12Q9HB15 430 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 SLCO1C1Q9NYB5 712 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 NLGN3Q9NZ94 848 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 ELF5Q9UKW6 265 aaPredicted RBP12.69□□□□□ -0.38
ACTN1-204ENST00000438964 NUP50Q9UKX7 468 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 ING4Q9UNL4 249 aa12.69□□□□□ -0.38
ACTN1-204ENST00000438964 A0A0G2JN53 185 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 ZC3H12DA2A288 527 aaKnown RBP12.68□□□□□ -0.38
ACTN1-204ENST00000438964 C5orf58C9J3I9 102 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 CA12O43570 354 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 RAB36O95755 333 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 EPHX1P07099 455 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 NR2F6P10588 404 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 ALPPL2P10696 532 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 HSD3B1P14060 373 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 LIMS1P48059 325 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 SLC6A12P48065 614 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 EVX1P49640 407 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 ARHGDIBP52566 201 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 WNT4P56705 351 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 GRB14Q14449 540 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 LGALSLQ3ZCW2 172 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-204ENST00000438964 LRRC70Q7Z2Q7 622 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 IZUMO1Q8IYV9 350 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 PIAS4Q8N2W9 510 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-204ENST00000438964 CLDN22Q8N7P3 220 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 WDR20Q8TBZ3 569 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 ASB11Q8WXH4 323 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 TTC9Q92623 222 aa12.68□□□□□ -0.38
ACTN1-204ENST00000438964 ARMC5Q96C12 935 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms