RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 CDC42EP5Q6NZY7 148 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 SIGLEC15Q6ZMC9 328 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 C15orf52Q6ZUT6 534 aaKnown RBP2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 GPR141Q7Z602 305 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 CCDC83Q8IWF9 413 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 NUP93Q8N1F7 819 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 OR7G3Q8NG95 312 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 ATP8B4Q8TF62 1192 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 USP28Q96RU2 1077 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 KRT12Q99456 494 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 ZNF559Q9BR84 538 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 ATG101Q9BSB4 218 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 IDI2Q9BXS1 227 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 CACNG6Q9BXT2 260 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 TDRD1Q9BXT4 1180 aaKnown RBP2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 UBQLN3Q9H347 655 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 C3orf14Q9HBI5 128 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 ABCB8Q9NUT2 735 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 FBXL5Q9UKA1 691 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 ELF5Q9UKW6 265 aaPredicted RBP2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 GPR132Q9UNW8 380 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 ITM2BQ9Y287 266 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 NEUROG3Q9Y4Z2 214 aa2.78□□□□□ -1.96
HMGB3P12-201ENST00000438745 SIPA1L3O60292 1781 aaPredicted RBP2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 MAPK8IP3Q9UPT6 1336 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 IGLV7-46A0A075B6I9 117 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 A0A0A6YYC8 382 aaPredicted RBP2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 CCDC162PA2VCL2 907 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 ANKDD1BA6NHY2 528 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 H0YIG0 161 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 I3L1I5 382 aaPredicted RBP2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 SLC1A7O00341 560 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 TTI1O43156 1089 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 SLC16A8O95907 504 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 PGK2P07205 417 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 ZSCAN5DPP0CG00 497 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 EZRP15311 586 aaKnown RBP2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 SRD5A2P31213 254 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 PRKAR2BP31323 418 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 TSFMP43897 325 aaKnown RBP2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 GYG1P46976 350 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 DHODHQ02127 395 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 NECTIN1Q15223 517 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 TAB1Q15750 504 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 TYSND1Q2T9J0 566 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 ARMCX4Q5H9R4 360 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 ATP1A1-AS1Q5TC04 95 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 KLHL10Q6JEL2 608 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 C11orf88Q6PI97 169 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 C17orf107Q6ZR85 190 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 LINC00696Q6ZRV3 163 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 TRMT11Q7Z4G4 463 aaKnown RBP2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 COX8CQ7Z4L0 72 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 CATSPERDQ86XM0 798 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 CLYBLQ8N0X4 340 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 RPLP0P6Q8NHW5 317 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 FAM222BQ8WU58 562 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 CKAP2Q8WWK9 683 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 SLCO2A1Q92959 643 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 AP2M1Q96CW1 435 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 OMA1Q96E52 524 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 CNRIP1Q96F85 164 aaPredicted RBP2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 IWS1Q96ST2 819 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 PKP2Q99959 881 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 TRIM51Q9BSJ1 452 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 DCTN5Q9BTE1 182 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 FUT8Q9BYC5 575 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 DNAI2Q9GZS0 605 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 UPF3AQ9H1J1 476 aaKnown RBP2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 B3GAT2Q9NPZ5 323 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 SLCO1C1Q9NYB5 712 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 CNIH4Q9P003 139 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 ANKMY1Q9P2S6 941 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 BAIAP2L1Q9UHR4 511 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 FBXL4Q9UKA2 621 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 DUSP12Q9UNI6 340 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 SATB2Q9UPW6 733 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 PA2G4Q9UQ80 394 aaKnown RBP2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 TMED7Q9Y3B3 224 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 IGF2RP11717 2491 aa2.77□□□□□ -1.97
HMGB3P12-201ENST00000438745 CEP295Q9C0D2 2601 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 VPS13AQ96RL7 3174 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 MROH7-TTC4A0A0A0MT08 1334 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 A0A0B4J203 849 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 MEX3AA1L020 520 aaKnown RBP2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 ZNF732B4DXR9 585 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 ATP9AO75110 1047 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 KRT33AO76009 404 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 GLCEO94923 617 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 MMP1P03956 469 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 ASNSP08243 561 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 SBK2P0C263 348 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 C8orf89P0DMQ9 161 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 GATA1P15976 413 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 CTNNA2P26232 953 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 HLA-FP30511 346 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 FRKP42685 505 aaPredicted RBP2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 NOVP48745 357 aa2.76□□□□□ -1.97
HMGB3P12-201ENST00000438745 CSRP3P50461 194 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms