RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 NEMFO60524 1076 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 SMPD2O60906 423 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 CSDE1O75534 798 aaKnown RBP3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 CPNE6O95741 557 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 PDGFBP01127 241 aaPredicted RBP3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 ALPPP05187 535 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 SFTPBP07988 381 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 GPR89BP0CG08 455 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 ALPPL2P10696 532 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 GHRP10912 638 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 TMOD1P28289 359 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 GJB2P29033 226 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 IFNAR2P48551 515 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 NDUFV3P56181 108 aaKnown RBP3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 SARNPP82979 210 aaKnown RBP3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 HSPA14Q0VDF9 509 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 RIGQ13278 110 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 PDK1Q15118 436 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 TRADDQ15628 312 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 LRRC23Q53EV4 343 aaPredicted RBP3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 MUC21Q5SSG8 566 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 C12orf60Q5U649 245 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 RGS9BPQ6ZS82 235 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 GPRIN3Q6ZVF9 776 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 TOM1L2Q6ZVM7 507 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 RUFY3Q7L099 469 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 CARM1Q86X55 608 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 LYG1Q8N1E2 194 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 LRRC43Q8N309 656 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 Q8N377 158 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 FBXW8Q8N3Y1 598 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 C17orf47Q8NEP4 570 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 NEK11Q8NG66 645 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 OR1B1Q8NGR6 318 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 SUN5Q8TC36 379 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 FAM222BQ8WU58 562 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 UBTD2Q8WUN7 234 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 SLC13A3Q8WWT9 602 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 EPSTI1Q96J88 318 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 ZNF597Q96LX8 424 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 NAP1L3Q99457 506 aaPredicted RBP3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 TXN2Q99757 166 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 NUSAP1Q9BXS6 441 aaKnown RBP3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 GANQ9H2C0 597 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 RIBC2Q9H4K1 309 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 DEPPQ9NTK1 212 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 NINJ2Q9NZG7 142 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 PSORS1C1Q9UIG5 152 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 MGAT4AQ9UM21 535 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 NIP7Q9Y221 180 aaKnown RBP eCLIP3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 EXOC6BQ9Y2D4 811 aa3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 RPH3AQ9Y2J0 694 aaPredicted RBP3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 TDRKHQ9Y2W6 561 aaKnown RBP3.08□□□□□ -1.92
LSM1P1-201ENST00000438629 IGKV3D-20A0A0C4DH25 116 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 NEDD8-MDP1E9PL57 170 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 RIPK2O43353 540 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 B4GAT1O43505 415 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 HSF2BPO75031 334 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 SERPINF2P08697 491 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 TSPY4P0CV99 314 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 TSPY10P0CW01 314 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 ZNF18P17022 549 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 ZNF10P21506 573 aaPredicted RBP3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 GLRA1P23415 457 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 LMO2P25791 158 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 OR1D2P34982 312 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 ACAA2P42765 397 aaKnown RBP3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 CASP9P55211 416 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 YBEYP58557 167 aaPredicted RBP3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 TSTA3Q13630 321 aaPredicted RBP3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 GAMTQ14353 236 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 HEPACAMQ14CZ8 416 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 OR1C1Q15619 314 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 LPAL2Q16609 132 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 POM121L1PQ3SYA9 428 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 B3GLCTQ6Y288 498 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 ZNF730Q6ZMV8 503 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 ZNF841Q6ZN19 808 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 KCNMB4Q86W47 210 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 CNTN4Q8IWV2 1026 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 C4orf32Q8N8J7 132 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 ICA1LQ8NDH6 482 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 URGCPQ8TCY9 931 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 ST7LQ8TDW4 575 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 TOMM40LQ969M1 308 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 TAAR6Q96RI8 345 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 RAB40CQ96S21 281 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 SOSTQ9BQB4 213 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 PYGO2Q9BRQ0 406 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 CRACR2AQ9BSW2 395 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 LRRCC1Q9C099 1032 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 NACA2Q9H009 215 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 VPS37BQ9H9H4 285 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 ZCCHC3Q9NUD5 404 aaKnown RBP3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 ACOXLQ9NUZ1 547 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 CYP39A1Q9NYL5 469 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 FETUBQ9UGM5 382 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 MRPS2Q9Y399 296 aaKnown RBP3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 OR1A2Q9Y585 309 aa3.07□□□□□ -1.92
LSM1P1-201ENST00000438629 V9GYY5 206 aaPredicted RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms