RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 TMEM129A0AVI4 362 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 ANKDD1BA6NHY2 528 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 RNF103O00237 685 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 KIF5CO60282 957 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 LETM1O95202 739 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 BAG2O95816 211 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 KRT6AP02538 564 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 KRT6BP04259 564 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 DLATP10515 647 aaKnown RBP2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 UROSP10746 265 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 VDRP11473 427 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 ATP6V1B1P15313 513 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 GOT1P17174 413 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 VCLP18206 1134 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 EDNRAP25101 427 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 CASP3P42574 277 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 KRT6CP48668 564 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 SLC34A1Q06495 639 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 ABRQ12979 859 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 RCN2Q14257 317 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 ACKR1Q16570 336 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 DUSP5Q16690 384 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 C2orf76Q3KRA6 126 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 ZNF542PQ5EBM4 170 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 PM20D1Q6GTS8 502 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 TCEAL6Q6IPX3 200 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 PODNL1Q6PEZ8 512 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 TRMT11Q7Z4G4 463 aaKnown RBP2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 CCDC83Q8IWF9 413 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 SLC22A15Q8IZD6 547 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 TCEANCQ8N8B7 351 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 RNF149Q8NC42 400 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 KIAA0895Q8NCT3 520 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 OR10G7Q8NGN6 311 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 NXPE2Q96DL1 559 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 C2orf48Q96LS8 159 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 FAM218AQ96MZ4 157 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 PANX3Q96QZ0 392 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 PCDHB18PQ96TA0 734 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 CACNG6Q9BXT2 260 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 YTHDF1Q9BYJ9 559 aaKnown RBP2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 NAPBQ9H115 298 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 RSPH9Q9H1X1 276 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 MMADHCQ9H3L0 296 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 DPEP2Q9H4A9 486 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 VIPAS39Q9H9C1 493 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 PNPLA3Q9NST1 481 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 SPG21Q9NZD8 308 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 MTRRQ9UBK8 725 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 TRPC4Q9UBN4 977 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 SLC6A5Q9Y345 797 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 PCDHGA1Q9Y5H4 931 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 BRD4O60885 1362 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 GPRASP1Q5JY77 1395 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 ANKRD31Q8N7Z5 1873 aa2.33□□□□□ -2.04
HMGB1P31-201ENST00000437242 CASP8AP2Q9UKL3 1982 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 THSD7BQ9C0I4 1608 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 ADAMTSL1Q8N6G6 1762 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 A0A087X0K7 114 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 TCP10L2B9ZVM9 353 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 M0R296 226 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 ACSL4O60488 711 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 SH3BGRLO75368 114 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 MT-ND2P03891 347 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 THY1P04216 161 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 ZNF19P17023 458 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 AOC1P19801 751 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 C4BPBP20851 252 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 CTNNA2P26232 953 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 SRD5A2P31213 254 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 ARF5P84085 180 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 RUNX3Q13761 415 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 SLC10A5Q5PT55 438 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 PLPP4Q5VZY2 271 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 KCTD11Q693B1 232 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 SLC27A4Q6P1M0 643 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 REG3GQ6UW15 175 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 IGFL3Q6UXB1 125 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 TOM1L2Q6ZVM7 507 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 KCTD9Q7L273 389 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 CATSPER3Q86XQ3 398 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 AQP12AQ8IXF9 295 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 TDHQ8IZJ6 230 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 MSANTD4Q8NCY6 345 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 AGAP11Q8TF27 550 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 BCL2L2Q92843 193 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 AP2M1Q96CW1 435 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 CFAP36Q96G28 342 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 CCM2Q9BSQ5 444 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 LRRC2Q9BYS8 371 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 CUEDC2Q9H467 287 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 ZDHHC6Q9H6R6 413 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 AKIRIN1Q9H9L7 192 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 DBF4Q9UBU7 674 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 BAIAP2L1Q9UHR4 511 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 IKZF3Q9UKT9 509 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 NCKAP1Q9Y2A7 1128 aa2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 DICER1Q9UPY3 1922 aaKnown RBP2.32□□□□□ -2.04
HMGB1P31-201ENST00000437242 TJP1Q07157 1748 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms