RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 SELENOPP49908 381 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 OAZ1P54368 228 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 SELENOWP63302 87 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 PROKR2Q8NFJ6 384 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 SERPINB11Q96P15 392 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 NMRK2Q9NPI5 230 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 KRCC1Q9NPI7 259 aaPredicted RBP7.1□□□□□ -1.27
CPSF6-202ENST00000435070 ZFR2Q9UPR6 939 aaKnown RBP7.1□□□□□ -1.27
CPSF6-202ENST00000435070 QSER1Q2KHR3 1735 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 SH3D21A4FU49 640 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 CASTOR2A6NHX0 329 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 H3BRB1 525 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 RAMP2O60895 175 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 ZNF254O75437 659 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 HPXP02790 462 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 ITPKAP23677 461 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 RGRP47804 291 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 OC90Q02509 493 aaPredicted RBP7.1□□□□□ -1.27
CPSF6-202ENST00000435070 NOTUMQ6P988 496 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 ZNF613Q6PF04 617 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 GLB1LQ6UWU2 654 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 TFAP2EQ6VUC0 442 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 LAS2Q8IYD9 372 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 SAMD12Q8N8I0 201 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 UXS1Q8NBZ7 420 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 GPR156Q8NFN8 814 aa7.1□□□□□ -1.27
CPSF6-202ENST00000435070 AHCYL2Q96HN2 611 aaKnown RBP7.1□□□□□ -1.27
CPSF6-202ENST00000435070 IMP3Q9NV31 184 aaKnown RBP7.1□□□□□ -1.27
CPSF6-202ENST00000435070 GLYATL1P3A0A0U1RQE8 302 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 GCM2O75603 506 aaPredicted RBP7.09□□□□□ -1.27
CPSF6-202ENST00000435070 GBAP04062 536 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 OR1E1P30953 314 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 NOXRED1Q6NXP6 359 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 LYPD4Q6UWN0 246 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 ZNF600Q6ZNG1 722 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 RD3Q7Z3Z2 195 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 CLRN3Q8NCR9 226 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 BBS1Q8NFJ9 593 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 TMEM163Q8TC26 289 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 LKAAEAR1Q8TD35 194 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 C2CD4CQ8TF44 421 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 NMUR1Q9HB89 426 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 DLL4Q9NR61 685 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 ACER3Q9NUN7 267 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 CRLS1Q9UJA2 301 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 TMEM5Q9Y2B1 443 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 RPL36Q9Y3U8 105 aaKnown RBP7.09□□□□□ -1.27
CPSF6-202ENST00000435070 TRBV4-1A0A0J9YWV2 114 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 ZAR1LA6NP61 321 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 H7C2Y5 167 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 STK16O75716 305 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 CLDN9O95484 217 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 TCRBP04435 133 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 HOXB6P17509 224 aaKnown RBP7.09□□□□□ -1.27
CPSF6-202ENST00000435070 PNPLA4P41247 253 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 FNTBP49356 437 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 GAB1Q13480 694 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 CRB2Q5IJ48 1285 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 SFRP4Q6FHJ7 346 aaPredicted RBP7.09□□□□□ -1.27
CPSF6-202ENST00000435070 DEF8Q6ZN54 512 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 MSANTD1Q6ZTZ1 278 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 PAQR7Q86WK9 346 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 GPR135Q8IZ08 494 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 GPRC5AQ8NFJ5 357 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 OR2T4Q8NH00 348 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 IGSF8Q969P0 613 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 REG4Q9BYZ8 158 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 GPR160Q9UJ42 338 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 FLVCR2Q9UPI3 526 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 F8W036 122 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 H7C4K7 107 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 PIP5K1CO60331 668 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 TFPIP10646 304 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 JUPP14923 745 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 DSC1Q08554 894 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 ABRQ12979 859 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 HEPACAMQ14CZ8 416 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 TCTE1Q5JU00 501 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 KRT78Q8N1N4 520 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 NANPQ8TBE9 248 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 MRPS31Q92665 395 aaKnown RBP7.09□□□□□ -1.27
CPSF6-202ENST00000435070 RNFT2Q96EX2 444 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 WDR89Q96FK6 387 aaPredicted RBP7.09□□□□□ -1.27
CPSF6-202ENST00000435070 SMARCD1Q96GM5 515 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 LRR1Q96L50 414 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 ZNF285Q96NJ3 590 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 ATF6BQ99941 703 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 DPH7Q9BTV6 452 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 NTMT1Q9BV86 223 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 DPAGT1Q9H3H5 408 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 CD93Q9NPY3 652 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 LYARQ9NX58 379 aaKnown RBP7.09□□□□□ -1.27
CPSF6-202ENST00000435070 PLCL2Q9UPR0 1127 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 LIPT1Q9Y234 373 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 CACNG2Q9Y698 323 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 A0A0C4DFX4 3053 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 ARID1AO14497 2285 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 A0A0G2JPF8 293 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 HNRNPCL3B7ZW38 293 aa7.09□□□□□ -1.27
CPSF6-202ENST00000435070 SLC25A14O95258 325 aaPredicted RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms