RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 PLPP4Q5VZY2 271 aa15.8■□□□□ 0.12
RIF1-204ENST00000430328 ZNF572Q7Z3I7 529 aaPredicted RBP15.8■□□□□ 0.12
RIF1-204ENST00000430328 ZNF610Q8N9Z0 462 aa15.8■□□□□ 0.12
RIF1-204ENST00000430328 INPP4AQ96PE3 977 aaPredicted RBP15.8■□□□□ 0.12
RIF1-204ENST00000430328 EBF4Q9BQW3 602 aa15.8■□□□□ 0.12
RIF1-204ENST00000430328 GPN2Q9H9Y4 310 aaPredicted RBP15.8■□□□□ 0.12
RIF1-204ENST00000430328 ZFP37Q9Y6Q3 630 aaPredicted RBP15.8■□□□□ 0.12
RIF1-204ENST00000430328 CNTNAP1P78357 1384 aa15.8■□□□□ 0.12
RIF1-204ENST00000430328 MMP8P22894 467 aa15.8■□□□□ 0.12
RIF1-204ENST00000430328 NAA11Q9BSU3 229 aaPredicted RBP15.8■□□□□ 0.12
RIF1-204ENST00000430328 POLMQ9NP87 494 aaPredicted RBP15.8■□□□□ 0.12
RIF1-204ENST00000430328 LRRC10BA6NIK2 292 aa15.8■□□□□ 0.12
RIF1-204ENST00000430328 ADRB2P07550 413 aa15.8■□□□□ 0.12
RIF1-204ENST00000430328 TACR2P21452 398 aa15.8■□□□□ 0.12
RIF1-204ENST00000430328 POU3F4P49335 361 aa15.8■□□□□ 0.12
RIF1-204ENST00000430328 LIX1LQ8IVB5 337 aa15.8■□□□□ 0.12
RIF1-204ENST00000430328 OR51T1Q8NGJ9 327 aa15.8■□□□□ 0.12
RIF1-204ENST00000430328 MRPS17Q9Y2R5 130 aaKnown RBP15.8■□□□□ 0.12
RIF1-204ENST00000430328 CPS1P31327 1500 aa15.8■□□□□ 0.12
RIF1-204ENST00000430328 YY2O15391 372 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 ARSFP54793 590 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 C1orf52Q8N6N3 182 aaKnown RBP15.79■□□□□ 0.12
RIF1-204ENST00000430328 IL17RCQ8NAC3 791 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 SH3YL1Q96HL8 342 aaPredicted RBP15.79■□□□□ 0.12
RIF1-204ENST00000430328 BIVM-ERCC5R4GMW8 1640 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 TISP43B9A030 160 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 RGL2O15211 777 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 RAB28P51157 221 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.79■□□□□ 0.12
RIF1-204ENST00000430328 RNF130Q86XS8 419 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 NKD2Q969F2 451 aaPredicted RBP15.79■□□□□ 0.12
RIF1-204ENST00000430328 MSLNLQ96KJ4 702 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 B3GNT3Q9Y2A9 372 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 ADCY10Q96PN6 1610 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 CBSLP0DN79 551 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 PRSS3P35030 304 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 CBSP35520 551 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 IL10RBQ08334 325 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 SLAMF1Q13291 335 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 UGT3A2Q3SY77 523 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 SFRP5Q5T4F7 317 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 LPPQ93052 612 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 ZUFSPQ96AP4 578 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 NUS1Q96E22 293 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 OXSMQ9NWU1 459 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 KLHL33A6NCF5 533 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 SLC22A31A6NKX4 558 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 PRR18Q8N4B5 295 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 CNN2Q99439 309 aaKnown RBP15.79■□□□□ 0.12
RIF1-204ENST00000430328 ZNF207O43670 478 aaKnown RBP15.79■□□□□ 0.12
RIF1-204ENST00000430328 GPR137BO60478 399 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 MED6O75586 246 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 SCO1O75880 301 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 NKX3-2P78367 333 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 CARD17Q5XLA6 110 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 KLBQ86Z14 1044 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 HPSE2Q8WWQ2 592 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 ALG3Q92685 438 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 QRSL1Q9H0R6 528 aaKnown RBP15.79■□□□□ 0.12
RIF1-204ENST00000430328 A2ML1A8K2U0 1454 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 CCL16O15467 120 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 B4GALT2O60909 372 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 UGT2B7P16662 529 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 SLC18B1Q6NT16 456 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 MEX3BQ6ZN04 569 aaKnown RBP15.79■□□□□ 0.12
RIF1-204ENST00000430328 MCATQ8IVS2 390 aaKnown RBP15.79■□□□□ 0.12
RIF1-204ENST00000430328 NPAS3Q8IXF0 933 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 ZNF486Q96H40 463 aaPredicted RBP15.79■□□□□ 0.12
RIF1-204ENST00000430328 KLHL21Q9UJP4 597 aa15.79■□□□□ 0.12
RIF1-204ENST00000430328 HMGXB3Q12766 1538 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 PRAF2O60831 178 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 PTPN2P17706 415 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 NAA10P41227 235 aaPredicted RBP15.78■□□□□ 0.12
RIF1-204ENST00000430328 MAP2K4P45985 399 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 ANKRD22Q5VYY1 191 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 C6orf120Q7Z4R8 191 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 ACTRT3Q9BYD9 372 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 TLE6Q9H808 572 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 FKBPLQ9UIM3 349 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 IL13RA1P78552 427 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 SLC30A7Q8NEW0 376 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 OR10Q1Q8NGQ4 319 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 MGLLQ99685 303 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 RNF32Q9H0A6 362 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 GTF2H4Q92759 462 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 B3GNT5Q9BYG0 378 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 PCDHB3Q9Y5E6 796 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 TTC3P53804 2025 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 VAMP3Q15836 100 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 TTLL10Q6ZVT0 673 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 OR52A5Q9H2C5 316 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 PLEKHJ1Q9NW61 149 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 SIX4Q9UIU6 781 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 CPQQ9Y646 472 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 RIC1Q4ADV7 1423 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 B4GAT1O43505 415 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 GPR143P51810 404 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 SEC13P55735 322 aa15.78■□□□□ 0.12
RIF1-204ENST00000430328 MRPS10P82664 201 aaKnown RBP15.78■□□□□ 0.12
RIF1-204ENST00000430328 IRGQQ8WZA9 623 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms