RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 IMPA1P29218 277 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 XCR1P46094 333 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 SNTA1Q13424 505 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 RGS21Q2M5E4 152 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 ELOA3BQ3SY89 546 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 ARSJQ5FYB0 599 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-207ENST00000429896 C3orf38Q5JPI3 329 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 LRRC17Q8N6Y2 441 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 ELOA3Q8NG57 546 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 COL21A1Q96P44 957 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 SLC30A3Q99726 388 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 SLC17A4Q9Y2C5 497 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 TTC3P53804 2025 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 FAM172BPA6NC97 362 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 AVPR2P30518 371 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 SLC7A1P30825 629 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 DIO3P55073 304 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 GRB7Q14451 532 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 GANABQ14697 944 aaKnown RBP12.28□□□□□ -0.44
PTCH1-207ENST00000429896 NDUFAF5Q5TEU4 345 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 LETMD1Q6P1Q0 360 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 TMEM107Q6UX40 140 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 RNF130Q86XS8 419 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 CRIPAKQ8N1N5 446 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 DEPDC4Q8N2C3 294 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.28□□□□□ -0.446e-8■■■■■ 75.4
PTCH1-207ENST00000429896 TMCO6Q96DC7 493 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 MAP3K3Q99759 626 aa12.28□□□□□ -0.44
PTCH1-207ENST00000429896 SLC5A10A0PJK1 596 aa12.27□□□□□ -0.44
PTCH1-207ENST00000429896 TNFRSF10AO00220 468 aa12.27□□□□□ -0.44
PTCH1-207ENST00000429896 FCARP24071 287 aa12.27□□□□□ -0.44
PTCH1-207ENST00000429896 RPS9P46781 194 aaKnown RBP12.27□□□□□ -0.44
PTCH1-207ENST00000429896 KCNJ5P48544 419 aa12.27□□□□□ -0.44
PTCH1-207ENST00000429896 VLDLRP98155 873 aa12.27□□□□□ -0.44
PTCH1-207ENST00000429896 PHOSPHO1Q8TCT1 267 aa12.27□□□□□ -0.44
PTCH1-207ENST00000429896 DCBLD2Q96PD2 775 aa12.27□□□□□ -0.44
PTCH1-207ENST00000429896 ATOH8Q96SQ7 321 aa12.27□□□□□ -0.44
PTCH1-207ENST00000429896 MACROD1Q9BQ69 325 aa12.27□□□□□ -0.44
PTCH1-207ENST00000429896 ALOXE3Q9BYJ1 711 aa12.27□□□□□ -0.44
PTCH1-207ENST00000429896 NLGN3Q9NZ94 848 aa12.27□□□□□ -0.44
PTCH1-207ENST00000429896 CKLFQ9UBR5 152 aa12.27□□□□□ -0.44
PTCH1-207ENST00000429896 C3orf18Q9UK00 162 aa12.27□□□□□ -0.44
PTCH1-207ENST00000429896 SCN1AP35498 2009 aa12.27□□□□□ -0.44
PTCH1-207ENST00000429896 A0A1W2PP18 115 aa12.27□□□□□ -0.44
PTCH1-207ENST00000429896 PCP4L1A6NKN8 68 aa12.27□□□□□ -0.44
PTCH1-207ENST00000429896 SDHDO14521 159 aa12.27□□□□□ -0.44
PTCH1-207ENST00000429896 RRP8O43159 456 aaKnown RBP12.27□□□□□ -0.44
PTCH1-207ENST00000429896 PRKAR1AP10644 381 aa12.27□□□□□ -0.44
PTCH1-207ENST00000429896 AOC1P19801 751 aa12.27□□□□□ -0.44
PTCH1-207ENST00000429896 GABRA3P34903 492 aa12.27□□□□□ -0.44
PTCH1-207ENST00000429896 EIF1AXP47813 144 aaKnown RBP12.27□□□□□ -0.44
PTCH1-207ENST00000429896 AKR1D1P51857 326 aa12.27□□□□□ -0.44
PTCH1-207ENST00000429896 EEFSECP57772 596 aaKnown RBP12.27□□□□□ -0.44
PTCH1-207ENST00000429896 TIMM50Q3ZCQ8 353 aa12.27□□□□□ -0.44
PTCH1-207ENST00000429896 ARHGAP22Q7Z5H3 698 aa12.27□□□□□ -0.44
PTCH1-207ENST00000429896 MEIOBQ8N635 442 aa12.27□□□□□ -0.44
PTCH1-207ENST00000429896 ZNF611Q8N823 705 aa12.27□□□□□ -0.44
PTCH1-207ENST00000429896 CIB1Q99828 191 aa12.27□□□□□ -0.44
PTCH1-207ENST00000429896 DNAJC15Q9Y5T4 150 aa12.27□□□□□ -0.44
PTCH1-207ENST00000429896 TSPAN9O75954 239 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 AZGP1P25311 298 aaKnown RBP12.27□□□□□ -0.45
PTCH1-207ENST00000429896 TEAD1P28347 426 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 DCST1Q5T197 706 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 SLCO6A1Q86UG4 719 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 CLEC1AQ8NC01 280 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 PIGXQ8TBF5 258 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 C11orf24Q96F05 449 aaPredicted RBP12.27□□□□□ -0.45
PTCH1-207ENST00000429896 LRRN3Q9H3W5 708 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 GSTO2Q9H4Y5 243 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 GIN1Q9NXP7 522 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 B4GALT7Q9UBV7 327 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 PTBP2Q9UKA9 531 aaKnown RBP12.27□□□□□ -0.45
PTCH1-207ENST00000429896 AP2S1P53680 142 aaPredicted RBP12.27□□□□□ -0.45
PTCH1-207ENST00000429896 SRSF5Q13243 272 aaKnown RBP12.27□□□□□ -0.45
PTCH1-207ENST00000429896 ELOAQ14241 798 aaKnown RBP12.27□□□□□ -0.45
PTCH1-207ENST00000429896 PTGR1Q14914 329 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 TBC1D25Q3MII6 688 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 TMEM151BQ8IW70 566 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 ARMC10Q8N2F6 343 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 ZNF615Q8N8J6 731 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 NFKBIDQ8NI38 313 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 SPIN1Q9Y657 262 aaPredicted RBP12.27□□□□□ -0.45
PTCH1-207ENST00000429896 NOBOXO60393 691 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 SEMA3DO95025 777 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 STARD6P59095 220 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 GRIK2Q13002 908 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 ZNF630Q2M218 657 aaPredicted RBP12.27□□□□□ -0.45
PTCH1-207ENST00000429896 OR56A3Q8NH54 315 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 COQ8BQ96D53 544 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 ZBTB26Q9HCK0 441 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 HHATLQ9HCP6 504 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 TNFRSF11BO00300 401 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 PLGP00747 810 aaPredicted RBP12.27□□□□□ -0.45
PTCH1-207ENST00000429896 IGHEP01854 428 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 HTR6P50406 440 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 CDK6Q00534 326 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 FAM69BQ5VUD6 431 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 CCDC54Q8NEL0 328 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 CCL4L1Q8NHW4 92 aa12.27□□□□□ -0.45
PTCH1-207ENST00000429896 UBTD2Q8WUN7 234 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms