RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 BEST3Q8N1M1 668 aa7.22□□□□□ -1.25
SYNPO2-202ENST00000429713 ARMC10Q8N2F6 343 aa7.22□□□□□ -1.25
SYNPO2-202ENST00000429713 MFSD4AQ8N468 514 aa7.22□□□□□ -1.25
SYNPO2-202ENST00000429713 ZNF565Q8N9K5 539 aa7.22□□□□□ -1.25
SYNPO2-202ENST00000429713 LMO3Q8TAP4 145 aa7.22□□□□□ -1.25
SYNPO2-202ENST00000429713 PGLYRP2Q96PD5 576 aa7.22□□□□□ -1.25
SYNPO2-202ENST00000429713 MCCC1Q96RQ3 725 aaPredicted RBP7.22□□□□□ -1.25
SYNPO2-202ENST00000429713 UBQLN3Q9H347 655 aa7.22□□□□□ -1.25
SYNPO2-202ENST00000429713 ABRACLQ9P1F3 81 aa7.22□□□□□ -1.25
SYNPO2-202ENST00000429713 ETV7Q9Y603 341 aa7.22□□□□□ -1.25
SYNPO2-202ENST00000429713 A0A1B0GUH1 482 aa7.22□□□□□ -1.25
SYNPO2-202ENST00000429713 ST8SIA5O15466 376 aa7.22□□□□□ -1.25
SYNPO2-202ENST00000429713 NCK1P16333 377 aa7.22□□□□□ -1.25
SYNPO2-202ENST00000429713 YWHAQP27348 245 aa7.22□□□□□ -1.25
SYNPO2-202ENST00000429713 NRLP54845 237 aa7.22□□□□□ -1.25
SYNPO2-202ENST00000429713 CTXN3Q4LDR2 81 aa7.22□□□□□ -1.25
SYNPO2-202ENST00000429713 PRAMEF17Q5VTA0 474 aa7.22□□□□□ -1.25
SYNPO2-202ENST00000429713 SMARCD3Q6STE5 483 aa7.22□□□□□ -1.25
SYNPO2-202ENST00000429713 ISL2Q96A47 359 aa7.22□□□□□ -1.25
SYNPO2-202ENST00000429713 ZNF471Q9BX82 626 aaPredicted RBP7.22□□□□□ -1.25
SYNPO2-202ENST00000429713 TMPRSS13Q9BYE2 586 aa7.22□□□□□ -1.25
SYNPO2-202ENST00000429713 RBCK1Q9BYM8 510 aa7.22□□□□□ -1.25
SYNPO2-202ENST00000429713 TPT1P8Q9HAU6 139 aa7.22□□□□□ -1.25
SYNPO2-202ENST00000429713 MGAT4CQ9UBM8 478 aa7.22□□□□□ -1.25
SYNPO2-202ENST00000429713 PARP14Q460N5 1801 aa7.22□□□□□ -1.25
SYNPO2-202ENST00000429713 COL1A2P08123 1366 aa7.22□□□□□ -1.25
SYNPO2-202ENST00000429713 TRAV20A0A0B4J274 112 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 RFXAPO00287 272 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 ARNTLO00327 626 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 CPN1P15169 458 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 POLR2GP62487 172 aaKnown RBP eCLIP7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 SNTB2Q13425 540 aaKnown RBP7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 ATPAF1Q5TC12 328 aaPredicted RBP7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 MLIPQ5VWP3 458 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 SSX7Q7RTT5 188 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 PPTC7Q8NI37 304 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 MOCOSQ96EN8 888 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 CDK15Q96Q40 435 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 SLC38A3Q99624 504 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 SEMA3CQ99985 751 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 MARCH2Q9P0N8 246 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 PLXNB2O15031 1838 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 MT-CYBP00156 380 aaPredicted RBP7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 SLC2A1P11166 492 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 NOS3P29474 1203 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 SLC36A4Q6YBV0 504 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 IGDCC3Q8IVU1 814 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 PRRT1Q99946 306 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 ADAM19Q9H013 955 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 TMPRSS4Q9NRS4 437 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 LAMP5Q9UJQ1 280 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 LATO43561 262 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 BMP7P18075 431 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 PBLDP30039 288 aaPredicted RBP7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 NKX3-2P78367 333 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 PDSS1Q5T2R2 415 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 ZC3H14Q6PJT7 736 aaKnown RBP7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 C5orf46Q6UWT4 87 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 OR2D3Q8NGH3 330 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 SLC25A46Q96AG3 418 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 FERD3LQ96RJ6 166 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 WWTR1Q9GZV5 400 aa7.21□□□□□ -1.25
SYNPO2-202ENST00000429713 ABCA7Q8IZY2 2146 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 IFNA21P01568 189 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 ERCC1P07992 297 aaPredicted RBP7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 RHCEP18577 417 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 LARP4Q71RC2 724 aaKnown RBP eCLIP7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 DYNC2LI1Q8TCX1 351 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 TRPV4Q9HBA0 871 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 FAM212BQ9NTI7 297 aaPredicted RBP7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 ZNF490Q9ULM2 529 aaPredicted RBP7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 CIB4A0PJX0 185 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 OR2A25A4D2G3 310 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 TLR4O00206 839 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 SOCS2O14508 198 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 OR10H3O60404 316 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 MAGP20916 626 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 LPOP22079 712 aaPredicted RBP7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 TMEM115Q12893 351 aaPredicted RBP7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 TMEM198Q66K66 360 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 ZNF613Q6PF04 617 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 NUDT18Q6ZVK8 323 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 SERPINA11Q86U17 422 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 KDF1Q8NAX2 398 aaPredicted RBP7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 LRTM1Q9HBL6 345 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 KLHL9Q9P2J3 617 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 ARHGEF17Q96PE2 2063 aaPredicted RBP7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 F5H0A9 414 aaPredicted RBP7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 PRH1P02810 166 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 PIRTP0C851 137 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 TYMPP19971 482 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 ZNF10P21506 573 aaPredicted RBP7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 PTPN3P26045 913 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 KIAA1024LP59773 190 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 ADARB1P78563 741 aaKnown RBP7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 SLC39A12Q504Y0 691 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 CHMP1BQ7LBR1 199 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 RSC1A1Q92681 617 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 HLA-CQ95604 372 aa7.21□□□□□ -1.26
SYNPO2-202ENST00000429713 TMEM159Q96B96 161 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms