RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 VN1R5Q7Z5H4 357 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 NPAS4Q8IUM7 802 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 TIGD4Q8IY51 512 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 WBP2Q969T9 261 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 NT5DC2Q9H857 520 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 DMRT3Q9NQL9 472 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 MRPL39Q9NYK5 338 aaKnown RBP10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 LOC102723532A0A0G2JNH3 316 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 WASHC1A8K0Z3 465 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 GABRA5P31644 462 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 CAV3P56539 151 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 RPS25P62851 125 aaKnown RBP10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 NKX3-2P78367 333 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 GLYR1Q49A26 553 aaPredicted RBP10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 FAM26DQ5JW98 314 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 TMEM201Q5SNT2 666 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 ZNF697Q5TEC3 545 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 TPGS2Q68CL5 300 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 BRAT1Q6PJG6 821 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 SLCO4C1Q6ZQN7 724 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 WDR48Q8TAF3 677 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 TMEM163Q8TC26 289 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 WFDC5Q8TCV5 224 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 ACOT12Q8WYK0 555 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 C11orf24Q96F05 449 aaPredicted RBP10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 SLC35G5Q96KT7 338 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 ZNF354BQ96LW1 612 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 CAMK1GQ96NX5 476 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 TMEM175Q9BSA9 504 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 KATNB1Q9BVA0 655 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 ARHGAP39Q9C0H5 1083 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 SLC6A16Q9GZN6 736 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 ABCG5Q9H222 651 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 CHST8Q9H2A9 424 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 TMPRSS11EQ9UL52 423 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 TNS1Q9HBL0 1735 aaKnown RBP10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 AGAP14A8MT82 685 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 ANHXE9PGG2 379 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 FOXE1O00358 373 aaPredicted RBP10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 ADAM12O43184 909 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 GCM2O75603 506 aaPredicted RBP10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 TSPAN9O75954 239 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 IFNA7P01567 189 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 VIPR1P32241 457 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 HOXC5Q00444 222 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 MEF2AQ02078 507 aaPredicted RBP10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 GJD3Q8N144 294 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 NECTIN4Q96NY8 510 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 MED18Q9BUE0 208 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 KLHL1Q9NR64 748 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 SRRDQ9UH36 339 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 FBXO9Q9UK97 447 aaPredicted RBP10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 MRPS7Q9Y2R9 242 aaKnown RBP10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 DNMT3AQ9Y6K1 912 aaPredicted RBP10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 B8ZZF3 427 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 PRKYO43930 277 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 SLCO2B1O94956 709 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 IGFBP1P08833 259 aaPredicted RBP10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 CYBAP13498 195 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 PTBP1P26599 531 aaKnown RBP eCLIP10.22□□□□□ -0.771e-16■■■■■ 67.2
ATP2C1-204ENST00000428331 IMPA1P29218 277 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 ACSL1P33121 698 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 NUDT1P36639 197 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 FLT3LGP49771 235 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 CRYBA2P53672 197 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 DCDC1P59894 354 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 RAE1P78406 368 aaKnown RBP10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 C17orf64Q86WR6 236 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 SLC38A5Q8WUX1 472 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 RFT1Q96AA3 541 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 PDXPQ96GD0 296 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 SYT17Q9BSW7 474 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 PPIL3Q9H2H8 161 aaKnown RBP10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 KRCC1Q9NPI7 259 aaPredicted RBP10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 B3GNT2Q9NY97 397 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 MAT2BQ9NZL9 334 aa10.22□□□□□ -0.77
ATP2C1-204ENST00000428331 TDRD15B5MCY1 1934 aaKnown RBP10.21□□□□□ -0.77
ATP2C1-204ENST00000428331 STK25O00506 426 aa10.21□□□□□ -0.77
ATP2C1-204ENST00000428331 SSNA1O43805 119 aa10.21□□□□□ -0.77
ATP2C1-204ENST00000428331 STX11O75558 287 aa10.21□□□□□ -0.77
ATP2C1-204ENST00000428331 ACP2P11117 423 aa10.21□□□□□ -0.77
ATP2C1-204ENST00000428331 PRKACBP22694 351 aa10.21□□□□□ -0.77
ATP2C1-204ENST00000428331 GABRR2P28476 465 aa10.21□□□□□ -0.77
ATP2C1-204ENST00000428331 NTSP30990 170 aa10.21□□□□□ -0.77
ATP2C1-204ENST00000428331 SLC16A1P53985 500 aa10.21□□□□□ -0.77
ATP2C1-204ENST00000428331 ADNP2Q6IQ32 1131 aa10.21□□□□□ -0.77
ATP2C1-204ENST00000428331 KIAA1161Q6NSJ0 714 aa10.21□□□□□ -0.77
ATP2C1-204ENST00000428331 TSEN54Q7Z6J9 526 aaKnown RBP10.21□□□□□ -0.77
ATP2C1-204ENST00000428331 OR56A3Q8NH54 315 aa10.21□□□□□ -0.77
ATP2C1-204ENST00000428331 DPAGT1Q9H3H5 408 aa10.21□□□□□ -0.77
ATP2C1-204ENST00000428331 ENAMQ9NRM1 1142 aa10.21□□□□□ -0.77
ATP2C1-204ENST00000428331 ZNF224Q9NZL3 707 aa10.21□□□□□ -0.77
ATP2C1-204ENST00000428331 IGLV3-16A0A075B6K0 115 aa10.21□□□□□ -0.77
ATP2C1-204ENST00000428331 EPHX1P07099 455 aa10.21□□□□□ -0.77
ATP2C1-204ENST00000428331 ELFN1P0C7U0 828 aa10.21□□□□□ -0.77
ATP2C1-204ENST00000428331 ANXA3P12429 323 aa10.21□□□□□ -0.77
ATP2C1-204ENST00000428331 LHCGRP22888 699 aa10.21□□□□□ -0.77
ATP2C1-204ENST00000428331 CLEC12AQ5QGZ9 265 aa10.21□□□□□ -0.77
ATP2C1-204ENST00000428331 SLC8B1Q6J4K2 584 aa10.21□□□□□ -0.77
ATP2C1-204ENST00000428331 PGBD2Q6P3X8 592 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms