RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 PARK7Q99497 189 aaKnown RBP4.77□□□□□ -1.65
LINC00458-202ENST00000427299 IL12RB2Q99665 862 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 PIP5K1AQ99755 562 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 PKP2Q99959 881 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 IFT27Q9BW83 186 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 ERVK-6Q9BXR3 956 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 YTHDF1Q9BYJ9 559 aaKnown RBP4.77□□□□□ -1.65
LINC00458-202ENST00000427299 TKTL2Q9H0I9 626 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 FAM49AQ9H0Q0 323 aaPredicted RBP4.77□□□□□ -1.65
LINC00458-202ENST00000427299 SLC25A51Q9H1U9 297 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 OR10A4Q9H209 315 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 MFSD1Q9H3U5 465 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 WDR55Q9H6Y2 383 aaPredicted RBP4.77□□□□□ -1.65
LINC00458-202ENST00000427299 MAGEE1Q9HCI5 957 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 CCDC177Q9NQR7 707 aaPredicted RBP4.77□□□□□ -1.65
LINC00458-202ENST00000427299 ABCC13Q9NSE7 274 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 TREX1Q9NSU2 369 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 INTS10Q9NVR2 710 aaKnown RBP4.77□□□□□ -1.65
LINC00458-202ENST00000427299 ACTR3BQ9P1U1 418 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 KIAA1456Q9P272 454 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 TMEM181Q9P2C4 612 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 OR12D3Q9UGF7 316 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 SUN2Q9UH99 717 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 ZDHHC2Q9UIJ5 367 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 FBXO5Q9UKT4 447 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 RUVBL2Q9Y230 463 aaKnown RBP4.77□□□□□ -1.65
LINC00458-202ENST00000427299 AP3M1Q9Y2T2 418 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 NME7Q9Y5B8 376 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 DOCK3Q8IZD9 2030 aa4.77□□□□□ -1.65
LINC00458-202ENST00000427299 VWA8A3KMH1 1905 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 A0A0J9YYE9 177 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 LIPT2A6NK58 231 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.76□□□□□ -1.65
LINC00458-202ENST00000427299 NR5A2O00482 541 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 GMNNO75496 209 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 PGK1P00558 417 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 HPRP00739 348 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 NPPAP01160 153 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 JCHAINP01591 159 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 IGLV3-25P01717 112 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 FGF1P05230 155 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 TFAP2AP05549 437 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 GALTP07902 379 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 ARSBP15848 533 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 HLA-DPA1P20036 260 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 MYF6P23409 242 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 HOXD3P31249 432 aaPredicted RBP4.76□□□□□ -1.65
LINC00458-202ENST00000427299 AVPR1AP37288 418 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 EIF2DP41214 584 aaKnown RBP4.76□□□□□ -1.65
LINC00458-202ENST00000427299 ALDH3B2P48448 385 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 SERPINH1P50454 418 aaKnown RBP4.76□□□□□ -1.65
LINC00458-202ENST00000427299 SLC7A2P52569 658 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 NDST2P52849 883 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 CRYBB1P53674 252 aaPredicted RBP4.76□□□□□ -1.65
LINC00458-202ENST00000427299 KCNK10P57789 538 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 GABARAPL2P60520 117 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 PMPCAQ10713 525 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 GRIK2Q13002 908 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 LCP2Q13094 533 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 SCARB2Q14108 478 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 CYTH1Q15438 398 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 MED22Q15528 200 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 DLG2Q15700 870 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 AGKQ53H12 422 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 FAM76BQ5HYJ3 339 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 C6orf52Q5T4I8 152 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 TXNDC8Q6A555 127 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 NEPROQ6NW34 567 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 C8orf82Q6P1X6 216 aaPredicted RBP4.76□□□□□ -1.65
LINC00458-202ENST00000427299 TTC33Q6PID6 262 aaPredicted RBP4.76□□□□□ -1.65
LINC00458-202ENST00000427299 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.76□□□□□ -1.65
LINC00458-202ENST00000427299 ZBTB49Q6ZSB9 765 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 SLC16A12Q6ZSM3 486 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 MOB3CQ70IA8 216 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 C16orf82Q7Z2V1 217 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 GALNTL5Q7Z4T8 443 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 SPATA19Q7Z5L4 167 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 IGFN1Q86VF2 1251 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 ZDHHC23Q8IYP9 409 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 TBC1D21Q8IYX1 336 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 MINDY1Q8N5J2 469 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 DNAAF1Q8NEP3 725 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 RHEBL1Q8TAI7 183 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 DQX1Q8TE96 717 aaKnown RBP4.76□□□□□ -1.65
LINC00458-202ENST00000427299 HEXDCQ8WVB3 486 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 BORCS5Q969J3 196 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 MYLPFQ96A32 169 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 CENPNQ96H22 339 aaPredicted RBP4.76□□□□□ -1.65
LINC00458-202ENST00000427299 PPP1R36Q96LQ0 422 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 KLHL15Q96M94 604 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 NPAS2Q99743 824 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 TUBA1CQ9BQE3 449 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 BCL7BQ9BQE9 202 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 RETREG1Q9H6L5 497 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 PLGRKTQ9HBL7 147 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 SYTL2Q9HCH5 934 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 CSNK1G1Q9HCP0 422 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 CHRAC1Q9NRG0 131 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 RGS18Q9NS28 235 aa4.76□□□□□ -1.65
LINC00458-202ENST00000427299 SNTG1Q9NSN8 517 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms