RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 H0YIV9 168 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 PGRMC2O15173 223 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 EIF3HO15372 352 aaKnown RBP eCLIP13.71□□□□□ -0.21
ATG4B-209ENST00000425239 ACSL3O95573 720 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 CT62P0C5K7 136 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 SLC35E2P0CK97 266 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 FOSL1P15407 271 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 PTX3P26022 381 aaPredicted RBP13.71□□□□□ -0.21
ATG4B-209ENST00000425239 SSTR4P31391 388 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 CDK9P50750 372 aaKnown RBP13.71□□□□□ -0.21
ATG4B-209ENST00000425239 FBXW4P57775 412 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 RPS13P62277 151 aaKnown RBP13.71□□□□□ -0.21
ATG4B-209ENST00000425239 FUT7Q11130 342 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 GRTP1Q5TC63 336 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 LIPJQ5W064 366 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 NSUN5P2Q63ZY6 315 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 RNF111Q6ZNA4 994 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 SLC29A4Q7RTT9 530 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 LACC1Q8IV20 430 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 CENPLQ8N0S6 344 aaPredicted RBP13.71□□□□□ -0.21
ATG4B-209ENST00000425239 MMP21Q8N119 569 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 WDR20Q8TBZ3 569 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 SPPL2AQ8TCT8 520 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 NXNL1Q96CM4 212 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 RMND5BQ96G75 393 aaPredicted RBP13.71□□□□□ -0.21
ATG4B-209ENST00000425239 WDYHV1Q96HA8 205 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 DOCK7Q96N67 2140 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 GNRHR2Q96P88 292 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 ERP44Q9BS26 406 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 DOHHQ9BU89 302 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 CXorf21Q9HAI6 301 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 SAYSD1Q9NPB0 183 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.71□□□□□ -0.211e-9■□□□□ 9.3
ATG4B-209ENST00000425239 WHRNQ9P202 907 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 OPTCQ9UBM4 332 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 SAR1BQ9Y6B6 198 aa13.71□□□□□ -0.21
ATG4B-209ENST00000425239 C2orf92A0A1B0GVN3 265 aa13.7□□□□□ -0.22
ATG4B-209ENST00000425239 A0A1W2PPR1 153 aa13.7□□□□□ -0.22
ATG4B-209ENST00000425239 LRRC14BA6NHZ5 514 aa13.7□□□□□ -0.22
ATG4B-209ENST00000425239 CD8B2A6NJW9 211 aa13.7□□□□□ -0.22
ATG4B-209ENST00000425239 DVL2O14641 736 aa13.7□□□□□ -0.22
ATG4B-209ENST00000425239 ATE1O95260 518 aa13.7□□□□□ -0.22
ATG4B-209ENST00000425239 EPXP11678 715 aa13.7□□□□□ -0.22
ATG4B-209ENST00000425239 EPB42P16452 691 aa13.7□□□□□ -0.22
ATG4B-209ENST00000425239 TLX1P31314 330 aaPredicted RBP13.7□□□□□ -0.22
ATG4B-209ENST00000425239 SPRP35270 261 aaPredicted RBP13.7□□□□□ -0.22
ATG4B-209ENST00000425239 CASP3P42574 277 aa13.7□□□□□ -0.22
ATG4B-209ENST00000425239 CUL3Q13618 768 aa13.7□□□□□ -0.22
ATG4B-209ENST00000425239 KBTBD12Q3ZCT8 623 aa13.7□□□□□ -0.22
ATG4B-209ENST00000425239 TBCELQ5QJ74 424 aa13.7□□□□□ -0.22
ATG4B-209ENST00000425239 DCST1Q5T197 706 aa13.7□□□□□ -0.22
ATG4B-209ENST00000425239 MAATS1Q7Z4T9 603 aa13.7□□□□□ -0.22
ATG4B-209ENST00000425239 KRTAP1-3Q8IUG1 177 aa13.7□□□□□ -0.22
ATG4B-209ENST00000425239 TEX9Q8N6V9 391 aa13.7□□□□□ -0.22
ATG4B-209ENST00000425239 RHEBL1Q8TAI7 183 aa13.7□□□□□ -0.22
ATG4B-209ENST00000425239 CDKL2Q92772 493 aa13.7□□□□□ -0.22
ATG4B-209ENST00000425239 DIO2Q92813 273 aa13.7□□□□□ -0.22
ATG4B-209ENST00000425239 EXT2Q93063 718 aa13.7□□□□□ -0.22
ATG4B-209ENST00000425239 JSRP1Q96MG2 331 aaPredicted RBP13.7□□□□□ -0.22
ATG4B-209ENST00000425239 GPR78Q96P69 363 aa13.7□□□□□ -0.22
ATG4B-209ENST00000425239 GAL3ST4Q96RP7 486 aa13.7□□□□□ -0.22
ATG4B-209ENST00000425239 SECISBP2Q96T21 854 aaKnown RBP13.7□□□□□ -0.22
ATG4B-209ENST00000425239 EPB41L4BQ9H329 900 aa13.7□□□□□ -0.22
ATG4B-209ENST00000425239 NMRAL1Q9HBL8 299 aa13.7□□□□□ -0.22
ATG4B-209ENST00000425239 FETUBQ9UGM5 382 aa13.7□□□□□ -0.22
ATG4B-209ENST00000425239 SLC6A5Q9Y345 797 aa13.7□□□□□ -0.22
ATG4B-209ENST00000425239 NPFFR2Q9Y5X5 522 aa13.7□□□□□ -0.22
ATG4B-209ENST00000425239 MBD3L4A6NDZ8 208 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-209ENST00000425239 MBD3L3A6NE82 208 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-209ENST00000425239 MBD3L5A6NJ08 208 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-209ENST00000425239 DYRK3O43781 588 aa13.69□□□□□ -0.22
ATG4B-209ENST00000425239 SNX4O95219 450 aa13.69□□□□□ -0.22
ATG4B-209ENST00000425239 AIFM1O95831 613 aa13.69□□□□□ -0.22
ATG4B-209ENST00000425239 FAM58BPP0C7Q3 252 aa13.69□□□□□ -0.22
ATG4B-209ENST00000425239 BMP7P18075 431 aa13.69□□□□□ -0.22
ATG4B-209ENST00000425239 DNASE1P24855 282 aa13.69□□□□□ -0.22
ATG4B-209ENST00000425239 GDF1P27539 372 aa13.69□□□□□ -0.22
ATG4B-209ENST00000425239 HOXC12P31275 282 aa13.69□□□□□ -0.22
ATG4B-209ENST00000425239 BUD31P41223 144 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-209ENST00000425239 SLCO1A2P46721 670 aa13.69□□□□□ -0.22
ATG4B-209ENST00000425239 GUCY2DQ02846 1103 aa13.69□□□□□ -0.22
ATG4B-209ENST00000425239 MGAT2Q10469 447 aa13.69□□□□□ -0.22
ATG4B-209ENST00000425239 DDX39BQ13838 428 aaKnown RBP13.69□□□□□ -0.22
ATG4B-209ENST00000425239 SETDB1Q15047 1291 aa13.69□□□□□ -0.22
ATG4B-209ENST00000425239 RPS6KA2Q15349 733 aa13.69□□□□□ -0.22
ATG4B-209ENST00000425239 TMEM198Q66K66 360 aa13.69□□□□□ -0.22
ATG4B-209ENST00000425239 DESI1Q6ICB0 168 aa13.69□□□□□ -0.22
ATG4B-209ENST00000425239 PAMR1Q6UXH9 720 aa13.69□□□□□ -0.22
ATG4B-209ENST00000425239 L3MBTL4Q8NA19 623 aa13.69□□□□□ -0.22
ATG4B-209ENST00000425239 MBD3L2Q8NHZ7 208 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-209ENST00000425239 RILPQ96NA2 401 aa13.69□□□□□ -0.22
ATG4B-209ENST00000425239 PELOQ9BRX2 385 aaKnown RBP13.69□□□□□ -0.22
ATG4B-209ENST00000425239 UGT2B28Q9BY64 529 aa13.69□□□□□ -0.22
ATG4B-209ENST00000425239 LYARQ9NX58 379 aaKnown RBP13.69□□□□□ -0.22
ATG4B-209ENST00000425239 FOXD3Q9UJU5 478 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-209ENST00000425239 DTX4Q9Y2E6 619 aa13.69□□□□□ -0.22
ATG4B-209ENST00000425239 C15orf41Q9Y2V0 281 aa13.69□□□□□ -0.22
ATG4B-209ENST00000425239 RNF11Q9Y3C5 154 aa13.69□□□□□ -0.22
ATG4B-209ENST00000425239 PCDHGA11Q9Y5H2 935 aa13.69□□□□□ -0.22
ATG4B-209ENST00000425239 NSD1Q96L73 2696 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms