RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 ZNF473Q8WTR7 871 aaKnown RBP15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 ANKRD49Q8WVL7 239 aa15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 WNT2BQ93097 391 aa15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 PERPQ96FX8 193 aa15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 TMEM41AQ96HV5 264 aa15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 TUBA1CQ9BQE3 449 aa15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 PELOQ9BRX2 385 aaKnown RBP15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 TMEM79Q9BSE2 394 aa15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 ERVK-6Q9BXR3 956 aa15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 ACBD3Q9H3P7 528 aa15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 PPANQ9NQ55 473 aaKnown RBP15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 DNAJC11Q9NVH1 559 aa15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 WWOXQ9NZC7 414 aa15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 ERVK-19Q9WJR5 959 aa15.25■□□□□ 0.03
CHCHD3-202ENST00000423635 BANF1O75531 89 aa15.24■□□□□ 0.03
CHCHD3-202ENST00000423635 PTPN6P29350 595 aa15.24■□□□□ 0.03
CHCHD3-202ENST00000423635 GALNSP34059 522 aa15.24■□□□□ 0.03
CHCHD3-202ENST00000423635 CASP2P42575 452 aa15.24■□□□□ 0.03
CHCHD3-202ENST00000423635 MASP1P48740 699 aa15.24■□□□□ 0.03
CHCHD3-202ENST00000423635 DIO3P55073 304 aa15.24■□□□□ 0.03
CHCHD3-202ENST00000423635 PCDH1Q08174 1060 aa15.24■□□□□ 0.03
CHCHD3-202ENST00000423635 CBLBQ13191 982 aa15.24■□□□□ 0.03
CHCHD3-202ENST00000423635 SLAMF1Q13291 335 aa15.24■□□□□ 0.03
CHCHD3-202ENST00000423635 ZNF267Q14586 743 aaPredicted RBP15.24■□□□□ 0.03
CHCHD3-202ENST00000423635 TBCCQ15814 346 aa15.24■□□□□ 0.03
CHCHD3-202ENST00000423635 CYP1B1Q16678 543 aa15.24■□□□□ 0.03
CHCHD3-202ENST00000423635 HIST2H2ACQ16777 129 aaPredicted RBP15.24■□□□□ 0.03
CHCHD3-202ENST00000423635 MSS51Q4VC12 460 aa15.24■□□□□ 0.03
CHCHD3-202ENST00000423635 PAGE2BQ5JRK9 111 aa15.24■□□□□ 0.03
CHCHD3-202ENST00000423635 TIGD3Q6B0B8 471 aa15.24■□□□□ 0.03
CHCHD3-202ENST00000423635 HIST2H2AA3Q6FI13 130 aa15.24■□□□□ 0.03
CHCHD3-202ENST00000423635 CCDC137Q6PK04 289 aaKnown RBP15.24■□□□□ 0.03
CHCHD3-202ENST00000423635 TMEM64Q6YI46 380 aa15.24■□□□□ 0.03
CHCHD3-202ENST00000423635 C20orf204Q6ZNR8 217 aa15.24■□□□□ 0.03
CHCHD3-202ENST00000423635 DOK4Q8TEW6 326 aa15.24■□□□□ 0.03
CHCHD3-202ENST00000423635 INTS12Q96CB8 462 aaKnown RBP15.24■□□□□ 0.03
CHCHD3-202ENST00000423635 VPS39Q96JC1 886 aa15.24■□□□□ 0.03
CHCHD3-202ENST00000423635 WFIKKN1Q96NZ8 548 aa15.24■□□□□ 0.03
CHCHD3-202ENST00000423635 PHACTR1Q9C0D0 580 aa15.24■□□□□ 0.03
CHCHD3-202ENST00000423635 CNOT10Q9H9A5 744 aaKnown RBP15.24■□□□□ 0.03
CHCHD3-202ENST00000423635 SNX15Q9NRS6 342 aa15.24■□□□□ 0.03
CHCHD3-202ENST00000423635 C2orf92A0A1B0GVN3 265 aa15.23■□□□□ 0.03
CHCHD3-202ENST00000423635 CDH16O75309 829 aa15.23■□□□□ 0.03
CHCHD3-202ENST00000423635 PAX1P15863 534 aa15.23■□□□□ 0.03
CHCHD3-202ENST00000423635 RPP38P78345 283 aaKnown RBP15.23■□□□□ 0.03
CHCHD3-202ENST00000423635 TOMM20Q15388 145 aa15.23■□□□□ 0.03
CHCHD3-202ENST00000423635 CDKL4Q5MAI5 379 aa15.23■□□□□ 0.03
CHCHD3-202ENST00000423635 OR4C11Q6IEV9 310 aa15.23■□□□□ 0.03
CHCHD3-202ENST00000423635 ZNF662Q6ZS27 426 aa15.23■□□□□ 0.03
CHCHD3-202ENST00000423635 GPR180Q86V85 440 aa15.23■□□□□ 0.03
CHCHD3-202ENST00000423635 FAM83FQ8NEG4 500 aaPredicted RBP15.23■□□□□ 0.03
CHCHD3-202ENST00000423635 RIT1Q92963 219 aa15.23■□□□□ 0.03
CHCHD3-202ENST00000423635 KRT12Q99456 494 aa15.23■□□□□ 0.03
CHCHD3-202ENST00000423635 TEX10Q9NXF1 929 aaPredicted RBP15.23■□□□□ 0.03
CHCHD3-202ENST00000423635 ZNF226Q9NYT6 803 aa15.23■□□□□ 0.03
CHCHD3-202ENST00000423635 DSCAMO60469 2012 aa15.23■□□□□ 0.03
CHCHD3-202ENST00000423635 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 NCF1BA6NI72 391 aaPredicted RBP15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 NCF1CA8MVU1 366 aaPredicted RBP15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 STK16O75716 305 aa15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 TNFSF13O75888 250 aa15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 GPR75O95800 540 aa15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 TGFB1P01137 390 aa15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 NCF1P14598 390 aaPredicted RBP15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 EPORP19235 508 aa15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 CRYGSP22914 178 aa15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 CHMP24386 653 aa15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 TLX1P31314 330 aaPredicted RBP15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 SSR2P43308 183 aa15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 TMED10P49755 219 aaKnown RBP15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 TAS2R39P59534 338 aa15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 FAM27E3Q08E93 113 aa15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 ZNF460Q14592 562 aa15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 DEPDC1Q5TB30 811 aa15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 C18orf63Q68DL7 685 aa15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 TRMT10BQ6PF06 316 aaKnown RBP15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 SCIMPQ6UWF3 145 aa15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 YRDCQ86U90 279 aaKnown RBP15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 ZC3HC1Q86WB0 502 aaKnown RBP15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 LAS2Q8IYD9 372 aa15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 IGFBPL1Q8WX77 278 aa15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 ESAMQ96AP7 390 aa15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 UBTD1Q9HAC8 227 aa15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 PACSIN3Q9UKS6 424 aa15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 CHD3Q12873 2000 aaKnown RBP15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 MED12Q93074 2177 aa15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 CUBNO60494 3623 aa15.22■□□□□ 0.03
CHCHD3-202ENST00000423635 MSTNO14793 375 aa15.21■□□□□ 0.03
CHCHD3-202ENST00000423635 HSPA7P48741 367 aa15.21■□□□□ 0.03
CHCHD3-202ENST00000423635 PTH2RP49190 550 aa15.21■□□□□ 0.03
CHCHD3-202ENST00000423635 TNFRSF17Q02223 184 aa15.21■□□□□ 0.03
CHCHD3-202ENST00000423635 IRF8Q02556 426 aa15.21■□□□□ 0.03
CHCHD3-202ENST00000423635 CHIT1Q13231 466 aa15.21■□□□□ 0.03
CHCHD3-202ENST00000423635 PDK4Q16654 411 aa15.21■□□□□ 0.03
CHCHD3-202ENST00000423635 KHDRBS2Q5VWX1 349 aaKnown RBP15.21■□□□□ 0.03
CHCHD3-202ENST00000423635 SULT1C3Q6IMI6 304 aa15.21■□□□□ 0.03
CHCHD3-202ENST00000423635 TMEM81Q6P7N7 255 aa15.21■□□□□ 0.03
CHCHD3-202ENST00000423635 MED12LQ86YW9 2145 aa15.21■□□□□ 0.03
CHCHD3-202ENST00000423635 ZCCHC7Q8N3Z6 543 aaKnown RBP15.21■□□□□ 0.03
CHCHD3-202ENST00000423635 TRIM58Q8NG06 486 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms