RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 CPEP16870 476 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 HNMTP50135 292 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 DSTNP60981 165 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 SNTA1Q13424 505 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 ZMYND11Q15326 602 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 MPEG1Q2M385 716 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 PLK5Q496M5 336 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 HECTD3Q5T447 861 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 CRTC1Q6UUV9 634 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 ZNF655Q8N720 491 aaPredicted RBP15.79■□□□□ 0.12
PKP4-204ENST00000421462 MARVELD1Q9BSK0 173 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 REEP4Q9H6H4 257 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 MIEF1Q9NQG6 463 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 SPATA6Q9NWH7 488 aaPredicted RBP15.79■□□□□ 0.12
PKP4-204ENST00000421462 EIF3KQ9UBQ5 218 aaKnown RBP15.79■□□□□ 0.12
PKP4-204ENST00000421462 KCNE2Q9Y6J6 123 aa15.79■□□□□ 0.12
PKP4-204ENST00000421462 H3BUI4 141 aa15.78■□□□□ 0.12
PKP4-204ENST00000421462 NTN1O95631 604 aa15.78■□□□□ 0.12
PKP4-204ENST00000421462 ADAP00813 363 aa15.78■□□□□ 0.12
PKP4-204ENST00000421462 TP53P04637 393 aaPredicted RBP15.78■□□□□ 0.12
PKP4-204ENST00000421462 XPAP23025 273 aaPredicted RBP15.78■□□□□ 0.12
PKP4-204ENST00000421462 LIMS1P48059 325 aa15.78■□□□□ 0.12
PKP4-204ENST00000421462 WDR5P61964 334 aaKnown RBP15.78■□□□□ 0.12
PKP4-204ENST00000421462 TLE2Q04725 743 aa15.78■□□□□ 0.12
PKP4-204ENST00000421462 RGS1Q08116 209 aa15.78■□□□□ 0.12
PKP4-204ENST00000421462 MGAT3Q09327 533 aa15.78■□□□□ 0.12
PKP4-204ENST00000421462 COL9A2Q14055 689 aaPredicted RBP15.78■□□□□ 0.12
PKP4-204ENST00000421462 CRB2Q5IJ48 1285 aa15.78■□□□□ 0.12
PKP4-204ENST00000421462 KIAA1161Q6NSJ0 714 aa15.78■□□□□ 0.12
PKP4-204ENST00000421462 TCTN3Q6NUS6 607 aa15.78■□□□□ 0.12
PKP4-204ENST00000421462 COMMD6Q7Z4G1 85 aa15.78■□□□□ 0.12
PKP4-204ENST00000421462 OXR1Q8N573 874 aa15.78■□□□□ 0.12
PKP4-204ENST00000421462 OR4F15Q8NGB8 312 aa15.78■□□□□ 0.12
PKP4-204ENST00000421462 CLP1Q92989 425 aaKnown RBP15.78■□□□□ 0.12
PKP4-204ENST00000421462 NACC2Q96BF6 587 aa15.78■□□□□ 0.12
PKP4-204ENST00000421462 EGLN3Q9H6Z9 239 aa15.78■□□□□ 0.12
PKP4-204ENST00000421462 SCML1Q9UN30 329 aa15.78■□□□□ 0.12
PKP4-204ENST00000421462 ARHGEF33A8MVX0 844 aa15.78■□□□□ 0.12
PKP4-204ENST00000421462 ADAM12O43184 909 aa15.78■□□□□ 0.12
PKP4-204ENST00000421462 CHP2O43745 196 aa15.78■□□□□ 0.12
PKP4-204ENST00000421462 SLC43A1O75387 559 aa15.78■□□□□ 0.12
PKP4-204ENST00000421462 ELK1P19419 428 aa15.78■□□□□ 0.12
PKP4-204ENST00000421462 EVX1P49640 407 aa15.78■□□□□ 0.12
PKP4-204ENST00000421462 SNRPGP62308 76 aaKnown RBP15.78■□□□□ 0.12
PKP4-204ENST00000421462 ILKQ13418 452 aa15.78■□□□□ 0.12
PKP4-204ENST00000421462 SLC51BQ86UW2 128 aa15.78■□□□□ 0.12
PKP4-204ENST00000421462 IQCHQ86VS3 1027 aa15.78■□□□□ 0.12
PKP4-204ENST00000421462 DUSP18Q8NEJ0 188 aa15.78■□□□□ 0.12
PKP4-204ENST00000421462 OR11H7Q8NGC8 314 aa15.78■□□□□ 0.12
PKP4-204ENST00000421462 OR4D11Q8NGI4 311 aa15.78■□□□□ 0.12
PKP4-204ENST00000421462 RC3H2Q9HBD1 1191 aaKnown RBP15.78■□□□□ 0.12
PKP4-204ENST00000421462 CDH10Q9Y6N8 788 aa15.78■□□□□ 0.12
PKP4-204ENST00000421462 RNASET2O00584 256 aaKnown RBP15.77■□□□□ 0.12
PKP4-204ENST00000421462 EPHX1P07099 455 aa15.77■□□□□ 0.12
PKP4-204ENST00000421462 VSX2P58304 361 aaPredicted RBP15.77■□□□□ 0.12
PKP4-204ENST00000421462 HSPB3Q12988 150 aa15.77■□□□□ 0.12
PKP4-204ENST00000421462 SF3A2Q15428 464 aaKnown RBP15.77■□□□□ 0.12
PKP4-204ENST00000421462 GPR33Q49SQ1 333 aa15.77■□□□□ 0.12
PKP4-204ENST00000421462 RTP2Q5QGT7 225 aa15.77■□□□□ 0.12
PKP4-204ENST00000421462 LIPJQ5W064 366 aa15.77■□□□□ 0.12
PKP4-204ENST00000421462 PGBD2Q6P3X8 592 aa15.77■□□□□ 0.12
PKP4-204ENST00000421462 TMEM65Q6PI78 240 aa15.77■□□□□ 0.12
PKP4-204ENST00000421462 ADGRD2Q7Z7M1 963 aa15.77■□□□□ 0.12
PKP4-204ENST00000421462 LIX1LQ8IVB5 337 aa15.77■□□□□ 0.12
PKP4-204ENST00000421462 CHTF18Q8WVB6 975 aa15.77■□□□□ 0.12
PKP4-204ENST00000421462 NEIL2Q969S2 332 aa15.77■□□□□ 0.12
PKP4-204ENST00000421462 ZNF582Q96NG8 517 aaPredicted RBP15.77■□□□□ 0.12
PKP4-204ENST00000421462 ATF6BQ99941 703 aa15.77■□□□□ 0.12
PKP4-204ENST00000421462 RABL2AQ9UBK7 228 aaPredicted RBP15.77■□□□□ 0.12
PKP4-204ENST00000421462 NUP50Q9UKX7 468 aa15.77■□□□□ 0.12
PKP4-204ENST00000421462 PPIEQ9UNP9 301 aaKnown RBP15.77■□□□□ 0.12
PKP4-204ENST00000421462 HELZP42694 1942 aaKnown RBP15.77■□□□□ 0.11
PKP4-204ENST00000421462 TRBV5-4A0A0C4DH59 114 aa15.77■□□□□ 0.11
PKP4-204ENST00000421462 VNN2O95498 520 aa15.77■□□□□ 0.11
PKP4-204ENST00000421462 HMGA2P52926 109 aa15.77■□□□□ 0.11
PKP4-204ENST00000421462 DSC1Q08554 894 aa15.77■□□□□ 0.11
PKP4-204ENST00000421462 MAP2K5Q13163 448 aa15.77■□□□□ 0.11
PKP4-204ENST00000421462 BTN1A1Q13410 526 aa15.77■□□□□ 0.11
PKP4-204ENST00000421462 MRPL58Q14197 206 aaKnown RBP15.77■□□□□ 0.11
PKP4-204ENST00000421462 BHLHB9Q6PI77 547 aa15.77■□□□□ 0.11
PKP4-204ENST00000421462 HORMAD2Q8N7B1 307 aa15.77■□□□□ 0.11
PKP4-204ENST00000421462 SLC43A3Q8NBI5 491 aa15.77■□□□□ 0.11
PKP4-204ENST00000421462 TMEM19Q96HH6 336 aa15.77■□□□□ 0.11
PKP4-204ENST00000421462 TBX5Q99593 518 aa15.77■□□□□ 0.11
PKP4-204ENST00000421462 RSPO3Q9BXY4 272 aaPredicted RBP15.77■□□□□ 0.11
PKP4-204ENST00000421462 ARHGAP39Q9C0H5 1083 aa15.77■□□□□ 0.11
PKP4-204ENST00000421462 CLEC4MQ9H2X3 399 aaPredicted RBP15.77■□□□□ 0.11
PKP4-204ENST00000421462 GULP1Q9UBP9 304 aa15.77■□□□□ 0.11
PKP4-204ENST00000421462 TAGLNQ01995 201 aaKnown RBP15.76■□□□□ 0.11
PKP4-204ENST00000421462 PCDH1Q08174 1060 aa15.76■□□□□ 0.11
PKP4-204ENST00000421462 ZNF763Q0D2J5 394 aa15.76■□□□□ 0.11
PKP4-204ENST00000421462 PLD1Q13393 1074 aa15.76■□□□□ 0.11
PKP4-204ENST00000421462 ZNF630Q2M218 657 aaPredicted RBP15.76■□□□□ 0.11
PKP4-204ENST00000421462 POM121L1PQ3SYA9 428 aa15.76■□□□□ 0.11
PKP4-204ENST00000421462 GPR32P1Q8NGA4 272 aa15.76■□□□□ 0.11
PKP4-204ENST00000421462 TMEM163Q8TC26 289 aa15.76■□□□□ 0.11
PKP4-204ENST00000421462 SLC38A5Q8WUX1 472 aa15.76■□□□□ 0.11
PKP4-204ENST00000421462 B3GNT4Q9C0J1 378 aa15.76■□□□□ 0.11
PKP4-204ENST00000421462 FZD3Q9NPG1 666 aa15.76■□□□□ 0.11
PKP4-204ENST00000421462 ENAMQ9NRM1 1142 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms