RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 UBQLN3Q9H347 655 aa15.45■□□□□ 0.06
UPF3AP3-201ENST00000420996 ALG9Q9H6U8 611 aa15.45■□□□□ 0.06
UPF3AP3-201ENST00000420996 TSC22D4Q9Y3Q8 395 aa15.45■□□□□ 0.06
UPF3AP3-201ENST00000420996 KIAA1549Q9HCM3 1950 aa15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 C2orf92A0A1B0GVN3 265 aa15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 CD8B2A6NJW9 211 aa15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 WASHC1A8K0Z3 465 aa15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 ZSCAN12O43309 604 aa15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 GOSR1O95249 250 aa15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 ATE1O95260 518 aa15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 CLPSP04118 112 aa15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 HPNP05981 417 aa15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 EPB42P16452 691 aa15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 SSTR1P30872 391 aa15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 GP5P40197 560 aa15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 DDX39BQ13838 428 aaKnown RBP15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 KEAP1Q14145 624 aa15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 RPS6KA2Q15349 733 aa15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 NHSL2Q5HYW2 709 aa15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 MRM1Q6IN84 353 aaKnown RBP15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 CYS1Q717R9 158 aa15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 ISCA2Q86U28 154 aa15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 BIVMQ86UB2 503 aa15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 ZNF441Q8N8Z8 693 aa15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 SPPL2AQ8TCT8 520 aa15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 RILPQ96NA2 401 aa15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 SECISBP2Q96T21 854 aaKnown RBP15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 ANGPTL4Q9BY76 406 aa15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 SNX15Q9NRS6 342 aa15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 LYARQ9NX58 379 aaKnown RBP15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 ASB4Q9Y574 426 aa15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 PCDHGA11Q9Y5H2 935 aa15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 DOCK7Q96N67 2140 aa15.44■□□□□ 0.06
UPF3AP3-201ENST00000420996 A0A1W2PR48 441 aa15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 MBD3L4A6NDZ8 208 aaPredicted RBP15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 MBD3L3A6NE82 208 aaPredicted RBP15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 MBD3L5A6NJ08 208 aaPredicted RBP15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 SUPT3HB4E1H0 165 aa15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 SUPT3HO75486 399 aa15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 SLC35E2BP0CK96 405 aa15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 SLC35E2P0CK97 266 aa15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 CTSSP25774 331 aa15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 PTX3P26022 381 aaPredicted RBP15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 OPRM1P35372 400 aa15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 FBXW4P57775 412 aa15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 SORDQ00796 357 aa15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 FNDC7Q5VTL7 733 aa15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 BICRALQ6AI39 1079 aa15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 TMEM64Q6YI46 380 aa15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 PACS2Q86VP3 889 aa15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 CREG2Q8IUH2 290 aa15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 MBD3L2Q8NHZ7 208 aaPredicted RBP15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 GNRHR2Q96P88 292 aa15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 ATOH8Q96SQ7 321 aa15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 MTERF1Q99551 399 aaKnown RBP15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 ZNF717Q9BY31 904 aaPredicted RBP15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 PLEKHF2Q9H8W4 249 aa15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 CALHM2Q9HA72 323 aa15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 WDR41Q9HAD4 459 aa15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 NMRAL1Q9HBL8 299 aa15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 JKAMPQ9P055 326 aa15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 CAMK2AQ9UQM7 478 aa15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 SLC6A5Q9Y345 797 aa15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 NPFFR2Q9Y5X5 522 aa15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 EXPH5Q8NEV8 1989 aa15.43■□□□□ 0.06
UPF3AP3-201ENST00000420996 FLNAP21333 2647 aaKnown RBP15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 ABCA2Q9BZC7 2435 aa15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 A0A0A6YYD5 115 aa15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 GLOD5A6NK44 160 aa15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 FAM159BA6NKW6 160 aa15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 CCDC188H7C350 402 aa15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 UBXN8O00124 270 aa15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 TMPRSS11DO60235 418 aa15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 KERAO60938 352 aa15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 EEDO75530 441 aaKnown RBP15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 IL18BPO95998 194 aa15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 FAM58BPP0C7Q3 252 aa15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 NR2F6P10588 404 aa15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 BSGP35613 385 aa15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 GMPRP36959 345 aa15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 CASP3P42574 277 aa15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 MASP1P48740 699 aa15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 TMED10P49755 219 aaKnown RBP15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 RPS13P62277 151 aaKnown RBP15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 DLG1Q12959 904 aa15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 LIPJQ5W064 366 aa15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 HLA-DQA1Q5Y7H0 255 aa15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 CYP20A1Q6UW02 462 aa15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 WFDC11Q8NEX6 87 aa15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 LINC01560Q8TB33 94 aa15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 WDYHV1Q96HA8 205 aa15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 TRIB1Q96RU8 372 aa15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 UGT2B28Q9BY64 529 aa15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 DDX31Q9H8H2 851 aaKnown RBP15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 CXorf21Q9HAI6 301 aa15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 C15orf41Q9Y2V0 281 aa15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 SNX24Q9Y343 169 aa15.42■□□□□ 0.06
UPF3AP3-201ENST00000420996 TCRBV9S1A1TA0A576 114 aa15.41■□□□□ 0.06
UPF3AP3-201ENST00000420996 EEF1E1-BLOC1S5C9J1V9 151 aa15.41■□□□□ 0.06
UPF3AP3-201ENST00000420996 EEF1E1O43324 174 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms