RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 TGIF1Q15583 401 aa3.21□□□□□ -1.9
HMGB1P49-201ENST00000418882 AARDQ4LEZ3 155 aa3.21□□□□□ -1.9
HMGB1P49-201ENST00000418882 ODF2Q5BJF6 829 aa3.21□□□□□ -1.9
HMGB1P49-201ENST00000418882 ACER2Q5QJU3 275 aa3.21□□□□□ -1.9
HMGB1P49-201ENST00000418882 SEL1L2Q5TEA6 688 aa3.21□□□□□ -1.9
HMGB1P49-201ENST00000418882 RHBDD2Q6NTF9 364 aa3.21□□□□□ -1.9
HMGB1P49-201ENST00000418882 STEAP1BQ6NZ63 245 aa3.21□□□□□ -1.9
HMGB1P49-201ENST00000418882 CD164L2Q6UWJ8 174 aa3.21□□□□□ -1.9
HMGB1P49-201ENST00000418882 ABRAXAS1Q6UWZ7 409 aa3.21□□□□□ -1.9
HMGB1P49-201ENST00000418882 ADAMTSL5Q6ZMM2 481 aa3.21□□□□□ -1.9
HMGB1P49-201ENST00000418882 SNX32Q86XE0 403 aa3.21□□□□□ -1.9
HMGB1P49-201ENST00000418882 SIDT2Q8NBJ9 832 aaKnown RBP3.21□□□□□ -1.9
HMGB1P49-201ENST00000418882 PTP4A1Q93096 173 aa3.21□□□□□ -1.9
HMGB1P49-201ENST00000418882 ZBED6CLQ96FA7 236 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P49-201ENST00000418882 PIWIL1Q96J94 861 aaKnown RBP3.21□□□□□ -1.9
HMGB1P49-201ENST00000418882 NAPBQ9H115 298 aa3.21□□□□□ -1.9
HMGB1P49-201ENST00000418882 SLC26A1Q9H2B4 701 aa3.21□□□□□ -1.9
HMGB1P49-201ENST00000418882 TSPAN2O60636 221 aa3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 GAS8O95995 478 aa3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 IGHV3-9P01782 118 aa3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 P4HA1P13674 534 aa3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 UCP1P25874 307 aa3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 STX1BP61266 288 aa3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 HERV-K104P63124 156 aa3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 CXCL6P80162 114 aa3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 IGLV3-21P80748 117 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 PAX2Q02962 417 aa3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 KLF5Q13887 457 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 SGCBQ16585 318 aa3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 IFI44LQ53G44 452 aa3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 FHL5Q5TD97 284 aa3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 MARC1Q5VT66 337 aa3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 C11orf88Q6PI97 169 aa3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 SFRP1Q8N474 314 aa3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 ZNF713Q8N859 430 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 OR6M1Q8NGM8 313 aa3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 OR4A16Q8NH70 328 aa3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 TBCKQ8TEA7 893 aa3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 BADQ92934 168 aa3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 YTHDF1Q9BYJ9 559 aaKnown RBP3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 DEFB126Q9BYW3 111 aa3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 TSPYL1Q9H0U9 437 aa3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 DCLRE1BQ9H816 532 aa3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 ABCC13Q9NSE7 274 aa3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 IKZF3Q9UKT9 509 aa3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 CELA1Q9UNI1 258 aa3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 FOXA2Q9Y261 457 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P49-201ENST00000418882 IGHV3OR16-12A0A075B7B8 117 aa3.19□□□□□ -1.9
HMGB1P49-201ENST00000418882 A0A1W2PNU3 283 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P49-201ENST00000418882 K7ERI5 159 aa3.19□□□□□ -1.9
HMGB1P49-201ENST00000418882 ZNF263O14978 683 aa3.19□□□□□ -1.9
HMGB1P49-201ENST00000418882 GMNNO75496 209 aa3.19□□□□□ -1.9
HMGB1P49-201ENST00000418882 REC8O95072 547 aa3.19□□□□□ -1.9
HMGB1P49-201ENST00000418882 FCER2P06734 321 aa3.19□□□□□ -1.9
HMGB1P49-201ENST00000418882 HSP90AB1P08238 724 aaKnown RBP3.19□□□□□ -1.9
HMGB1P49-201ENST00000418882 HSD17B1P14061 328 aa3.19□□□□□ -1.9
HMGB1P49-201ENST00000418882 OAS2P29728 719 aaKnown RBP3.19□□□□□ -1.9
HMGB1P49-201ENST00000418882 CTNNB1P35222 781 aa3.19□□□□□ -1.9
HMGB1P49-201ENST00000418882 MDH2P40926 338 aaKnown RBP3.19□□□□□ -1.9
HMGB1P49-201ENST00000418882 RPL34P49207 117 aaKnown RBP3.19□□□□□ -1.9
HMGB1P49-201ENST00000418882 MFAP2P55001 183 aa3.19□□□□□ -1.9
HMGB1P49-201ENST00000418882 RPS4XP62701 263 aaKnown RBP3.19□□□□□ -1.9
HMGB1P49-201ENST00000418882 CDC37Q16543 378 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P49-201ENST00000418882 PPP1R3AQ16821 1122 aa3.19□□□□□ -1.9
HMGB1P49-201ENST00000418882 ZNF674Q2M3X9 581 aa3.19□□□□□ -1.9
HMGB1P49-201ENST00000418882 C1orf189Q5VU69 101 aa3.19□□□□□ -1.9
HMGB1P49-201ENST00000418882 GPR142Q7Z601 462 aa3.19□□□□□ -1.9
HMGB1P49-201ENST00000418882 FBXO25Q8TCJ0 367 aa3.19□□□□□ -1.9
HMGB1P49-201ENST00000418882 CRYGNQ8WXF5 182 aa3.19□□□□□ -1.9
HMGB1P49-201ENST00000418882 BIRC7Q96CA5 298 aa3.19□□□□□ -1.9
HMGB1P49-201ENST00000418882 FUNDC2Q9BWH2 189 aa3.19□□□□□ -1.9
HMGB1P49-201ENST00000418882 DNAJC11Q9NVH1 559 aa3.19□□□□□ -1.9
HMGB1P49-201ENST00000418882 SEC14L4Q9UDX3 406 aa3.19□□□□□ -1.9
HMGB1P49-201ENST00000418882 TEKT2Q9UIF3 430 aa3.19□□□□□ -1.9
HMGB1P49-201ENST00000418882 ZNF256Q9Y2P7 627 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P49-201ENST00000418882 KLF18A0A0U1RQI7 1052 aa3.18□□□□□ -1.9
HMGB1P49-201ENST00000418882 YJEFN3A6XGL0 299 aa3.18□□□□□ -1.9
HMGB1P49-201ENST00000418882 CACNB4O00305 520 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P49-201ENST00000418882 SH2D1BO14796 132 aa3.18□□□□□ -1.9
HMGB1P49-201ENST00000418882 FMO6PO60774 539 aa3.18□□□□□ -1.9
HMGB1P49-201ENST00000418882 PPP2R1BP30154 601 aa3.18□□□□□ -1.9
HMGB1P49-201ENST00000418882 GEMP55040 296 aa3.18□□□□□ -1.9
HMGB1P49-201ENST00000418882 UCP2P55851 309 aa3.18□□□□□ -1.9
HMGB1P49-201ENST00000418882 KRT83P78385 493 aa3.18□□□□□ -1.9
HMGB1P49-201ENST00000418882 GSTO1P78417 241 aa3.18□□□□□ -1.9
HMGB1P49-201ENST00000418882 MPPE1Q53F39 396 aa3.18□□□□□ -1.9
HMGB1P49-201ENST00000418882 PLBD1Q6P4A8 553 aa3.18□□□□□ -1.9
HMGB1P49-201ENST00000418882 RAPH1Q70E73 1250 aa3.18□□□□□ -1.9
HMGB1P49-201ENST00000418882 MOB2Q70IA6 237 aa3.18□□□□□ -1.9
HMGB1P49-201ENST00000418882 SERPINA12Q8IW75 414 aa3.18□□□□□ -1.9
HMGB1P49-201ENST00000418882 BEST4Q8NFU0 473 aa3.18□□□□□ -1.9
HMGB1P49-201ENST00000418882 RBM18Q96H35 190 aaKnown RBP3.18□□□□□ -1.9
HMGB1P49-201ENST00000418882 MRPL9Q9BYD2 267 aaKnown RBP3.18□□□□□ -1.9
HMGB1P49-201ENST00000418882 C2orf40Q9H1Z8 148 aa3.18□□□□□ -1.9
HMGB1P49-201ENST00000418882 GANQ9H2C0 597 aa3.18□□□□□ -1.9
HMGB1P49-201ENST00000418882 RNF41Q9H4P4 317 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P49-201ENST00000418882 ELL3Q9HB65 397 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P49-201ENST00000418882 IL1RAPL2Q9NP60 686 aa3.18□□□□□ -1.9
HMGB1P49-201ENST00000418882 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.18□□□□□ -1.9
HMGB1P49-201ENST00000418882 STX8Q9UNK0 236 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms