RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 RAB8BQ92930 207 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 TREX2Q9BQ50 279 aaPredicted RBP15.79■□□□□ 0.12
SSBP3-205ENST00000417664 FAM192AQ9GZU8 254 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 TOR3AQ9H497 397 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 SMURF2Q9HAU4 748 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 PRMT8Q9NR22 394 aaPredicted RBP15.79■□□□□ 0.12
SSBP3-205ENST00000417664 VNN3Q9NY84 501 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 TRPC4Q9UBN4 977 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 SUSD2Q9UGT4 822 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 PLCL2Q9UPR0 1127 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 MRPS2Q9Y399 296 aaKnown RBP15.79■□□□□ 0.12
SSBP3-205ENST00000417664 FAM32AQ9Y421 112 aaKnown RBP15.79■□□□□ 0.12
SSBP3-205ENST00000417664 PCDHGB5Q9Y5G0 923 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 TMEM131Q92545 1883 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 A8MVJ9 347 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 H3BNH8 94 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 HS6ST1O60243 411 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 IFNW1P05000 195 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 CPMP14384 443 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 RHCEP18577 417 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 MC3RP41968 323 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 PRKAG1P54619 331 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 EMP3P54852 163 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 SNRPNP63162 240 aaKnown RBP15.79■□□□□ 0.12
SSBP3-205ENST00000417664 IL18R1Q13478 541 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 LASP1Q14847 261 aaKnown RBP15.79■□□□□ 0.12
SSBP3-205ENST00000417664 MAPK11Q15759 364 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 KDM4DQ6B0I6 523 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 HS3ST5Q8IZT8 346 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 CA13Q8N1Q1 262 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 PROX1Q92786 737 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 ACTRT3Q9BYD9 372 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 PDE7BQ9NP56 450 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 EXD2Q9NVH0 621 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 FAM118AQ9NWS6 357 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 UCKL1Q9NWZ5 548 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 LRIT1Q9P2V4 623 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 TMEFF2Q9UIK5 374 aaPredicted RBP15.79■□□□□ 0.12
SSBP3-205ENST00000417664 GPC6Q9Y625 555 aaPredicted RBP15.79■□□□□ 0.12
SSBP3-205ENST00000417664 ENPP4Q9Y6X5 453 aa15.79■□□□□ 0.12
SSBP3-205ENST00000417664 A0A087WV62 115 aa15.78■□□□□ 0.12
SSBP3-205ENST00000417664 A0A0G2JPF8 293 aa15.78■□□□□ 0.12
SSBP3-205ENST00000417664 A0A1B0GVT2 93 aa15.78■□□□□ 0.12
SSBP3-205ENST00000417664 HNRNPCL2B2RXH8 293 aa15.78■□□□□ 0.12
SSBP3-205ENST00000417664 HNRNPCL3B7ZW38 293 aa15.78■□□□□ 0.12
SSBP3-205ENST00000417664 SLC16A6O15403 523 aa15.78■□□□□ 0.12
SSBP3-205ENST00000417664 SDC3O75056 442 aa15.78■□□□□ 0.12
SSBP3-205ENST00000417664 JRKO75564 520 aa15.78■□□□□ 0.12
SSBP3-205ENST00000417664 GPR75O95800 540 aa15.78■□□□□ 0.12
SSBP3-205ENST00000417664 CLPTM1O96005 669 aa15.78■□□□□ 0.12
SSBP3-205ENST00000417664 ATP1B1P05026 303 aa15.78■□□□□ 0.12
SSBP3-205ENST00000417664 HNRNPCL4P0DMR1 293 aa15.78■□□□□ 0.12
SSBP3-205ENST00000417664 ITGAMP11215 1152 aa15.78■□□□□ 0.12
SSBP3-205ENST00000417664 GLB1P16278 677 aa15.78■□□□□ 0.12
SSBP3-205ENST00000417664 CD247P20963 164 aa15.78■□□□□ 0.12
SSBP3-205ENST00000417664 IGFBP5P24593 272 aa15.78■□□□□ 0.12
SSBP3-205ENST00000417664 SIM1P81133 766 aaPredicted RBP15.78■□□□□ 0.12
SSBP3-205ENST00000417664 ATAD3BQ5T9A4 648 aa15.78■□□□□ 0.12
SSBP3-205ENST00000417664 CWF19L1Q69YN2 538 aaKnown RBP15.78■□□□□ 0.12
SSBP3-205ENST00000417664 TTC33Q6PID6 262 aaPredicted RBP15.78■□□□□ 0.12
SSBP3-205ENST00000417664 CEP68Q76N32 757 aa15.78■□□□□ 0.12
SSBP3-205ENST00000417664 TSEN54Q7Z6J9 526 aaKnown RBP15.78■□□□□ 0.12
SSBP3-205ENST00000417664 OR2L13Q8N349 312 aa15.78■□□□□ 0.12
SSBP3-205ENST00000417664 TTC29Q8NA56 475 aaPredicted RBP15.78■□□□□ 0.12
SSBP3-205ENST00000417664 MAGED4Q96JG8 741 aa15.78■□□□□ 0.12
SSBP3-205ENST00000417664 MS4A4EQ96PG1 132 aa15.78■□□□□ 0.12
SSBP3-205ENST00000417664 CSF3RQ99062 836 aa15.78■□□□□ 0.12
SSBP3-205ENST00000417664 ELF4Q99607 663 aaPredicted RBP15.78■□□□□ 0.12
SSBP3-205ENST00000417664 ENAMQ9NRM1 1142 aa15.78■□□□□ 0.12
SSBP3-205ENST00000417664 DDX18Q9NVP1 670 aaKnown RBP15.78■□□□□ 0.12
SSBP3-205ENST00000417664 PDP1Q9P0J1 537 aaPredicted RBP15.78■□□□□ 0.12
SSBP3-205ENST00000417664 SCN3AQ9NY46 2000 aa15.78■□□□□ 0.12
SSBP3-205ENST00000417664 DIRAS1O95057 198 aa15.77■□□□□ 0.12
SSBP3-205ENST00000417664 ZBTB11O95625 1053 aaPredicted RBP15.77■□□□□ 0.12
SSBP3-205ENST00000417664 FESP07332 822 aa15.77■□□□□ 0.12
SSBP3-205ENST00000417664 SMIM18P0DKX4 95 aa15.77■□□□□ 0.12
SSBP3-205ENST00000417664 PRKACGP22612 351 aa15.77■□□□□ 0.12
SSBP3-205ENST00000417664 RRM2P31350 389 aa15.77■□□□□ 0.12
SSBP3-205ENST00000417664 MLLT3P42568 568 aaPredicted RBP15.77■□□□□ 0.12
SSBP3-205ENST00000417664 XCR1P46094 333 aa15.77■□□□□ 0.12
SSBP3-205ENST00000417664 RPL5P46777 297 aaKnown RBP15.77■□□□□ 0.12
SSBP3-205ENST00000417664 KCNJ5P48544 419 aa15.77■□□□□ 0.12
SSBP3-205ENST00000417664 MAN2A2P49641 1150 aa15.77■□□□□ 0.12
SSBP3-205ENST00000417664 HMGA2P52926 109 aa15.77■□□□□ 0.12
SSBP3-205ENST00000417664 TUBA4AP68366 448 aa15.77■□□□□ 0.12
SSBP3-205ENST00000417664 GPLD1P80108 840 aa15.77■□□□□ 0.12
SSBP3-205ENST00000417664 SIGLEC14Q08ET2 396 aa15.77■□□□□ 0.12
SSBP3-205ENST00000417664 NR1D2Q14995 579 aa15.77■□□□□ 0.12
SSBP3-205ENST00000417664 DUSP7Q16829 419 aa15.77■□□□□ 0.12
SSBP3-205ENST00000417664 INAVAQ3KP66 663 aa15.77■□□□□ 0.12
SSBP3-205ENST00000417664 FAM92BQ6ZTR7 304 aa15.77■□□□□ 0.12
SSBP3-205ENST00000417664 PRSS41Q7RTY9 318 aa15.77■□□□□ 0.12
SSBP3-205ENST00000417664 SLC44A2Q8IWA5 706 aaPredicted RBP15.77■□□□□ 0.12
SSBP3-205ENST00000417664 SMYD1Q8NB12 490 aa15.77■□□□□ 0.12
SSBP3-205ENST00000417664 PIK3C3Q8NEB9 887 aa15.77■□□□□ 0.12
SSBP3-205ENST00000417664 OR5D16Q8NGK9 328 aa15.77■□□□□ 0.12
SSBP3-205ENST00000417664 APOBEC4Q8WW27 367 aaKnown RBP15.77■□□□□ 0.12
SSBP3-205ENST00000417664 AHCYL2Q96HN2 611 aaKnown RBP15.77■□□□□ 0.12
SSBP3-205ENST00000417664 FBXL20Q96IG2 436 aa15.77■□□□□ 0.12
SSBP3-205ENST00000417664 ZNF354BQ96LW1 612 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms