RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 PDE9AO76083 593 aa18.08■□□□□ 0.48
RAB3IP-205ENST00000417413 TDGF1P13385 188 aa18.08■□□□□ 0.48
RAB3IP-205ENST00000417413 MC3RP41968 323 aa18.08■□□□□ 0.48
RAB3IP-205ENST00000417413 DAPP51397 102 aa18.08■□□□□ 0.48
RAB3IP-205ENST00000417413 XKP51811 444 aa18.08■□□□□ 0.48
RAB3IP-205ENST00000417413 ARHGDIAP52565 204 aa18.08■□□□□ 0.48
RAB3IP-205ENST00000417413 COL9A2Q14055 689 aaPredicted RBP18.08■□□□□ 0.48
RAB3IP-205ENST00000417413 DUSP7Q16829 419 aa18.08■□□□□ 0.48
RAB3IP-205ENST00000417413 PRTGQ2VWP7 1150 aa18.08■□□□□ 0.48
RAB3IP-205ENST00000417413 CYP27C1Q4G0S4 372 aa18.08■□□□□ 0.48
RAB3IP-205ENST00000417413 ZC3H12BQ5HYM0 836 aaKnown RBP18.08■□□□□ 0.48
RAB3IP-205ENST00000417413 LYSMD4Q5XG99 296 aa18.08■□□□□ 0.48
RAB3IP-205ENST00000417413 SAMD14Q8IZD0 417 aaPredicted RBP18.08■□□□□ 0.48
RAB3IP-205ENST00000417413 CA13Q8N1Q1 262 aa18.08■□□□□ 0.48
RAB3IP-205ENST00000417413 LRRC25Q8N386 305 aaPredicted RBP18.08■□□□□ 0.48
RAB3IP-205ENST00000417413 NUP43Q8NFH3 380 aa18.08■□□□□ 0.48
RAB3IP-205ENST00000417413 GPR32P1Q8NGA4 272 aa18.08■□□□□ 0.48
RAB3IP-205ENST00000417413 OR5T3Q8NGG3 340 aa18.08■□□□□ 0.48
RAB3IP-205ENST00000417413 XAGE5Q8WWM1 108 aa18.08■□□□□ 0.48
RAB3IP-205ENST00000417413 RMND5BQ96G75 393 aaPredicted RBP18.08■□□□□ 0.48
RAB3IP-205ENST00000417413 MUS81Q96NY9 551 aa18.08■□□□□ 0.48
RAB3IP-205ENST00000417413 ZNF347Q96SE7 839 aa18.08■□□□□ 0.48
RAB3IP-205ENST00000417413 C3orf14Q9HBI5 128 aa18.08■□□□□ 0.48
RAB3IP-205ENST00000417413 NTMQ9P121 344 aa18.08■□□□□ 0.48
RAB3IP-205ENST00000417413 TRPC4Q9UBN4 977 aa18.08■□□□□ 0.48
RAB3IP-205ENST00000417413 SUSD2Q9UGT4 822 aa18.08■□□□□ 0.48
RAB3IP-205ENST00000417413 PCDHGB3Q9Y5G1 929 aa18.08■□□□□ 0.48
RAB3IP-205ENST00000417413 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.07■□□□□ 0.48
RAB3IP-205ENST00000417413 EME2A4GXA9 379 aaPredicted RBP18.07■□□□□ 0.48
RAB3IP-205ENST00000417413 CYR61O00622 381 aa18.07■□□□□ 0.48
RAB3IP-205ENST00000417413 KIF1CO43896 1103 aaKnown RBP18.07■□□□□ 0.48
RAB3IP-205ENST00000417413 RRM2P31350 389 aa18.07■□□□□ 0.48
RAB3IP-205ENST00000417413 GABRA4P48169 554 aa18.07■□□□□ 0.48
RAB3IP-205ENST00000417413 MAN2A2P49641 1150 aa18.07■□□□□ 0.48
RAB3IP-205ENST00000417413 PRR5P85299 388 aa18.07■□□□□ 0.48
RAB3IP-205ENST00000417413 FUT5Q11128 374 aa18.07■□□□□ 0.48
RAB3IP-205ENST00000417413 KCNAB2Q13303 367 aa18.07■□□□□ 0.48
RAB3IP-205ENST00000417413 LASP1Q14847 261 aaKnown RBP18.07■□□□□ 0.48
RAB3IP-205ENST00000417413 RFX4Q33E94 735 aa18.07■□□□□ 0.48
RAB3IP-205ENST00000417413 RNF220Q5VTB9 566 aa18.07■□□□□ 0.48
RAB3IP-205ENST00000417413 FOXB2Q5VYV0 432 aa18.07■□□□□ 0.48
RAB3IP-205ENST00000417413 TTC23Q5W5X9 447 aa18.07■□□□□ 0.48
RAB3IP-205ENST00000417413 KDM4DQ6B0I6 523 aa18.07■□□□□ 0.48
RAB3IP-205ENST00000417413 FAM92BQ6ZTR7 304 aa18.07■□□□□ 0.48
RAB3IP-205ENST00000417413 OR4N5Q8IXE1 308 aa18.07■□□□□ 0.48
RAB3IP-205ENST00000417413 TMEM52Q8NDY8 209 aa18.07■□□□□ 0.48
RAB3IP-205ENST00000417413 KAT2AQ92830 837 aa18.07■□□□□ 0.48
RAB3IP-205ENST00000417413 GIMAP5Q96F15 307 aa18.07■□□□□ 0.48
RAB3IP-205ENST00000417413 C16orf58Q96GQ5 468 aa18.07■□□□□ 0.48
RAB3IP-205ENST00000417413 TCTN2Q96GX1 697 aa18.07■□□□□ 0.48
RAB3IP-205ENST00000417413 YIPF4Q9BSR8 244 aa18.07■□□□□ 0.48
RAB3IP-205ENST00000417413 NPLQ9BXD5 320 aaPredicted RBP18.07■□□□□ 0.48
RAB3IP-205ENST00000417413 RUBCNLQ9H714 662 aa18.07■□□□□ 0.48
RAB3IP-205ENST00000417413 ANKRA2Q9H9E1 313 aa18.07■□□□□ 0.48
RAB3IP-205ENST00000417413 PDP1Q9P0J1 537 aaPredicted RBP18.07■□□□□ 0.48
RAB3IP-205ENST00000417413 C3orf18Q9UK00 162 aa18.07■□□□□ 0.48
RAB3IP-205ENST00000417413 A0A1B0GVT2 93 aa18.06■□□□□ 0.48
RAB3IP-205ENST00000417413 TRIM64A6NGJ6 449 aa18.06■□□□□ 0.48
RAB3IP-205ENST00000417413 SRPX2O60687 465 aaPredicted RBP18.06■□□□□ 0.48
RAB3IP-205ENST00000417413 MITFO75030 526 aaPredicted RBP18.06■□□□□ 0.48
RAB3IP-205ENST00000417413 TFAP2AP05549 437 aa18.06■□□□□ 0.48
RAB3IP-205ENST00000417413 ITGA2P17301 1181 aa18.06■□□□□ 0.48
RAB3IP-205ENST00000417413 SOX18P35713 384 aa18.06■□□□□ 0.48
RAB3IP-205ENST00000417413 PIGAP37287 484 aa18.06■□□□□ 0.48
RAB3IP-205ENST00000417413 XCR1P46094 333 aa18.06■□□□□ 0.48
RAB3IP-205ENST00000417413 ANXA11P50995 505 aaKnown RBP18.06■□□□□ 0.48
RAB3IP-205ENST00000417413 RAD23AP54725 363 aa18.06■□□□□ 0.48
RAB3IP-205ENST00000417413 PUM1Q14671 1186 aaKnown RBP eCLIP18.06■□□□□ 0.48
RAB3IP-205ENST00000417413 FAHD1Q6P587 224 aa18.06■□□□□ 0.48
RAB3IP-205ENST00000417413 TTC33Q6PID6 262 aaPredicted RBP18.06■□□□□ 0.48
RAB3IP-205ENST00000417413 LGI4Q8N135 537 aa18.06■□□□□ 0.48
RAB3IP-205ENST00000417413 TMEM105Q8N8V8 129 aa18.06■□□□□ 0.48
RAB3IP-205ENST00000417413 OR4C15Q8NGM1 316 aa18.06■□□□□ 0.48
RAB3IP-205ENST00000417413 OTUB1Q96FW1 271 aaPredicted RBP18.06■□□□□ 0.48
RAB3IP-205ENST00000417413 TREX2Q9BQ50 279 aaPredicted RBP18.06■□□□□ 0.48
RAB3IP-205ENST00000417413 RAB33BQ9H082 229 aa18.06■□□□□ 0.48
RAB3IP-205ENST00000417413 ERVMER34-1Q9H9K5 563 aa18.06■□□□□ 0.48
RAB3IP-205ENST00000417413 CLK4Q9HAZ1 481 aaKnown RBP18.06■□□□□ 0.48
RAB3IP-205ENST00000417413 BCL2L10Q9HD36 194 aa18.06■□□□□ 0.48
RAB3IP-205ENST00000417413 TESMINQ9Y4I5 508 aa18.06■□□□□ 0.48
RAB3IP-205ENST00000417413 LYVE1Q9Y5Y7 322 aa18.06■□□□□ 0.48
RAB3IP-205ENST00000417413 GPC6Q9Y625 555 aaPredicted RBP18.06■□□□□ 0.48
RAB3IP-205ENST00000417413 TMEM247A6NEH6 219 aa18.05■□□□□ 0.48
RAB3IP-205ENST00000417413 ADAMDEC1O15204 470 aa18.05■□□□□ 0.48
RAB3IP-205ENST00000417413 DNAJB5O75953 348 aa18.05■□□□□ 0.48
RAB3IP-205ENST00000417413 NR2F1P10589 423 aa18.05■□□□□ 0.48
RAB3IP-205ENST00000417413 CPMP14384 443 aa18.05■□□□□ 0.48
RAB3IP-205ENST00000417413 IGFBP5P24593 272 aa18.05■□□□□ 0.48
RAB3IP-205ENST00000417413 KCNJ5P48544 419 aa18.05■□□□□ 0.48
RAB3IP-205ENST00000417413 EPHA4P54764 986 aa18.05■□□□□ 0.48
RAB3IP-205ENST00000417413 ZNF528Q3MIS6 628 aa18.05■□□□□ 0.48
RAB3IP-205ENST00000417413 KCTD21Q4G0X4 260 aa18.05■□□□□ 0.48
RAB3IP-205ENST00000417413 TSPAN14Q8NG11 270 aa18.05■□□□□ 0.48
RAB3IP-205ENST00000417413 OR7G2Q8NG99 324 aa18.05■□□□□ 0.48
RAB3IP-205ENST00000417413 ZNF285Q96NJ3 590 aa18.05■□□□□ 0.48
RAB3IP-205ENST00000417413 OR7D2Q96RA2 312 aa18.05■□□□□ 0.48
RAB3IP-205ENST00000417413 ZNF607Q96SK3 696 aa18.05■□□□□ 0.48
RAB3IP-205ENST00000417413 DNAAF2Q9NVR5 837 aaKnown RBP18.05■□□□□ 0.48
RAB3IP-205ENST00000417413 EPHA6Q9UF33 1036 aa18.05■□□□□ 0.48
RAB3IP-205ENST00000417413 SH3GLB1Q9Y371 365 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms