RNA–Protein interactions for RNA: ENST00000416690.5

GTF3C3-203, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 326 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-203ENST00000416690 G3V3Y1 287 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 PSMD3O43242 534 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 PLOD3O60568 738 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 CELF2O95319 508 aaKnown RBP0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 SLC2A10O95528 541 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 RNASE2P10153 161 aaKnown RBP0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 KRT3P12035 628 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 ZNF14P17017 642 aaPredicted RBP0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 IDSP22304 550 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 ACKR3P25106 362 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 CDX1P47902 265 aaPredicted RBP0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 RGS7P49802 495 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 MFAP3P55082 362 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 EPS8Q12929 822 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 GPR50Q13585 617 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 PDE7AQ13946 482 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 CEACAM7Q14002 265 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 FAM174BQ3ZCQ3 159 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 KRTAP13-2Q52LG2 175 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 FAM71E1Q6IPT2 247 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 SLC25A34Q6PIV7 304 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 MMS22LQ6ZRQ5 1243 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 DNAAF5Q86Y56 855 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 BBS1Q8NFJ9 593 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 OR4F5Q8NH21 305 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 SPSB1Q96BD6 273 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 RSRC1Q96IZ7 334 aaKnown RBP0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 LINC00615Q96LM1 132 aaPredicted RBP0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 FOPNLQ96NB1 174 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 ZNF2Q9BSG1 426 aaPredicted RBP0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 ST6GALNAC5Q9BVH7 336 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 APOL6Q9BWW8 343 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 ELOVL4Q9GZR5 314 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 MTIF3Q9H2K0 278 aaKnown RBP0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 VIPAS39Q9H9C1 493 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 TAS2R16Q9NYV7 291 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 SEC14L4Q9UDX3 406 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 PPIAL4AQ9Y536 164 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 PCDHGA1Q9Y5H4 931 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 NACADO15069 1562 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 DOCK5Q9H7D0 1870 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 TTC28Q96AY4 2481 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 SLX4Q8IY92 1834 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 KIAA1671Q9BY89 1806 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 SNRNP200O75643 2136 aaKnown RBP0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 FREM3P0C091 2139 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 NCOR1O75376 2440 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 MDC1Q14676 2089 aaKnown RBP0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 PPLO60437 1756 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 STRCQ7RTU9 1775 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 USP24Q9UPU5 2620 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 FANCMQ8IYD8 2048 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 MUC5BQ9HC84 5762 aaPredicted RBP0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 RGPD1P0DJD0 1748 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 RICTORQ6R327 1708 aa0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 XRN1Q8IZH2 1706 aaKnown RBP0.47□□□□□ -2.33
GTF3C3-203ENST00000416690 RIMS1Q86UR5 1692 aaKnown RBP0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 ALPK3Q96L96 1907 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 KIF21BO75037 1637 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 RALGAPA2Q2PPJ7 1873 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 PLXNA1Q9UIW2 1896 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 MYO5AQ9Y4I1 1855 aaKnown RBP0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 SPTBP11277 2137 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 SMARCA2P51531 1590 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 EIF4G1Q04637 1599 aaKnown RBP0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 PSME4Q14997 1843 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 ATAD5Q96QE3 1844 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 ARFGEF1Q9Y6D6 1849 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 IGLV2-33A0A075B6J2 118 aaPredicted RBP0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 C2orf92A0A1B0GVN3 265 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 A6NCN8 305 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 ZSCAN5BA6NJL1 495 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 USP27XA6NNY8 438 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 FAM166BA8MTA8 275 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 TMX2-CTNND1H3BSU7 103 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 J3KRW8 73 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 WWP2O00308 870 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 DOK2O60496 412 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 ABCB1P08183 1280 aaPredicted RBP0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 MMP10P09238 476 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 CSH1P0DML2 217 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 CSH2P0DML3 217 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 PVRP15151 417 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 CYP11B1P15538 503 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 ACAT1P24752 427 aaKnown RBP0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 PTPN4P29074 926 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 LIG4P49917 911 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 RPL27P61353 136 aaKnown RBP0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 KCTD2Q14681 263 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 RPS6KA1Q15418 735 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 ZNF630Q2M218 657 aaPredicted RBP0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 CHRFAM7AQ494W8 412 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 GLYR1Q49A26 553 aaPredicted RBP0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 IQCCQ4KMZ1 466 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 TSPO2Q5TGU0 170 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 CCDC30Q5VVM6 783 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 KLHL10Q6JEL2 608 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 OTOAQ7RTW8 1153 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 UNC5CLQ8IV45 518 aa0.46□□□□□ -2.34
GTF3C3-203ENST00000416690 GVQW1Q8N7I0 195 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms